EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSHAG00000007024 (Gene tree)
Gene ID
100927308
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Sarcophilus_harrisii
Status
putative
Strand
Minus strand
Length
55265 bases
Position
chrGL834688.1:278466-333730
Accession
100927308
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSHAP00000008097CPSF73-100_CPF11718.85.8e-5311
ENSSHAP00000008097Beta-CaspPF10996.83.9e-3411
ENSSHAP00000008097Lactamase_BPF00753.278.9e-1911
ENSSHAP00000008097RMMBLPF07521.121e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSHAT00000008163CPSF3-2013645-ENSSHAP00000008097684 (aa)XP_003757924G3VY42
Gene Model
Click here to download ENSSHAG00000007024's gene model file
Pathways
Pathway IDPathway NameSource
shr03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000007024's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSHAG00000007024CPSF310097.807ENSG00000119203CPSF3100100.000Homo_sapiens
ENSSHAG00000007024CPSF37396.994ENSAPOG00000012241CPSF39096.982Acanthochromis_polyacanthus
ENSSHAG00000007024CPSF39985.125ENSAPOG00000022087cpsf39885.125Acanthochromis_polyacanthus
ENSSHAG00000007024CPSF310097.953ENSAMEG00000008493CPSF310097.953Ailuropoda_melanoleuca
ENSSHAG00000007024CPSF39285.873ENSACIG00000023663CPSF39985.873Amphilophus_citrinellus
ENSSHAG00000007024CPSF39282.325ENSACIG00000009846cpsf39982.325Amphilophus_citrinellus
ENSSHAG00000007024CPSF39985.272ENSAOCG00000022056cpsf39490.986Amphiprion_ocellaris
ENSSHAG00000007024CPSF39987.794ENSAOCG00000010077CPSF39887.794Amphiprion_ocellaris
ENSSHAG00000007024CPSF39987.794ENSAPEG00000021167CPSF39887.794Amphiprion_percula
ENSSHAG00000007024CPSF39985.420ENSAPEG00000019526cpsf39786.728Amphiprion_percula
ENSSHAG00000007024CPSF39985.125ENSATEG00000003959cpsf39885.125Anabas_testudineus
ENSSHAG00000007024CPSF39983.235ENSATEG00000014525CPSF39883.235Anabas_testudineus
ENSSHAG00000007024CPSF39895.089ENSAPLG00000006941CPSF39895.089Anas_platyrhynchos
ENSSHAG00000007024CPSF39392.598ENSACAG00000001759CPSF39992.598Anolis_carolinensis
ENSSHAG00000007024CPSF310091.374ENSANAG00000031254CPSF310091.374Aotus_nancymaae
ENSSHAG00000007024CPSF39286.190ENSACLG00000018846CPSF39986.190Astatotilapia_calliptera
ENSSHAG00000007024CPSF39785.414ENSACLG00000014484cpsf39985.414Astatotilapia_calliptera
ENSSHAG00000007024CPSF39987.794ENSAMXG00000004786cpsf39887.794Astyanax_mexicanus
ENSSHAG00000007024CPSF310098.099ENSBTAG00000019735CPSF310098.099Bos_taurus
ENSSHAG00000007024CPSF39358.410WBGene00013460cpsf-39258.410Caenorhabditis_elegans
ENSSHAG00000007024CPSF310097.368ENSCJAG00000006276CPSF310097.368Callithrix_jacchus
ENSSHAG00000007024CPSF310097.953ENSCAFG00000003375CPSF39597.953Canis_familiaris
ENSSHAG00000007024CPSF39098.384ENSCAFG00020026799CPSF310098.384Canis_lupus_dingo
ENSSHAG00000007024CPSF310098.099ENSCHIG00000013973CPSF310098.099Capra_hircus
ENSSHAG00000007024CPSF310097.661ENSTSYG00000002967CPSF310097.661Carlito_syrichta
ENSSHAG00000007024CPSF39896.552ENSCAPG00000013851CPSF310096.552Cavia_aperea
ENSSHAG00000007024CPSF310096.637ENSCPOG00000011299CPSF310096.637Cavia_porcellus
ENSSHAG00000007024CPSF310097.515ENSCCAG00000036730CPSF310097.515Cebus_capucinus
ENSSHAG00000007024CPSF310095.036ENSCATG00000014770CPSF39998.967Cercocebus_atys
ENSSHAG00000007024CPSF310096.491ENSCLAG00000002727CPSF310096.491Chinchilla_lanigera
ENSSHAG00000007024CPSF310089.912ENSCSAG00000007125CPSF310089.912Chlorocebus_sabaeus
ENSSHAG00000007024CPSF386100.000ENSCHOG00000000180CPSF38571.053Choloepus_hoffmanni
ENSSHAG00000007024CPSF39995.455ENSCPBG00000014074CPSF39995.455Chrysemys_picta_bellii
ENSSHAG00000007024CPSF39967.350ENSCING00000007214-9867.350Ciona_intestinalis
ENSSHAG00000007024CPSF310085.088ENSCANG00000034435CPSF310085.088Colobus_angolensis_palliatus
ENSSHAG00000007024CPSF310097.076ENSCGRG00001013134Cpsf310097.076Cricetulus_griseus_chok1gshd
ENSSHAG00000007024CPSF310097.076ENSCGRG00000018319Cpsf310097.076Cricetulus_griseus_crigri
ENSSHAG00000007024CPSF39986.490ENSCSEG00000002021CPSF39986.244Cynoglossus_semilaevis
ENSSHAG00000007024CPSF39988.382ENSCVAG00000015067CPSF39888.382Cyprinodon_variegatus
ENSSHAG00000007024CPSF39988.382ENSDARG00000027649cpsf39888.382Danio_rerio
ENSSHAG00000007024CPSF310096.350ENSDNOG00000008940CPSF39596.350Dasypus_novemcinctus
ENSSHAG00000007024CPSF39597.235ENSDORG00000014263Cpsf310097.235Dipodomys_ordii
ENSSHAG00000007024CPSF39967.452FBgn0261065Cpsf739867.452Drosophila_melanogaster
ENSSHAG00000007024CPSF39584.178ENSETEG00000003893CPSF310084.178Echinops_telfairi
ENSSHAG00000007024CPSF39978.653ENSEBUG00000009018cpsf39878.797Eptatretus_burgeri
ENSSHAG00000007024CPSF310097.953ENSEASG00005003970CPSF310097.953Equus_asinus_asinus
ENSSHAG00000007024CPSF310097.953ENSECAG00000019911CPSF310097.953Equus_caballus
ENSSHAG00000007024CPSF310082.456ENSEEUG00000015422CPSF310082.456Erinaceus_europaeus
ENSSHAG00000007024CPSF39987.647ENSELUG00000013775cpsf39887.647Esox_lucius
ENSSHAG00000007024CPSF310098.099ENSFCAG00000007852CPSF310098.099Felis_catus
ENSSHAG00000007024CPSF39595.209ENSFALG00000006572CPSF310095.209Ficedula_albicollis
ENSSHAG00000007024CPSF39996.041ENSFDAG00000006317CPSF39996.041Fukomys_damarensis
ENSSHAG00000007024CPSF39984.831ENSFHEG00000014774cpsf39884.831Fundulus_heteroclitus
ENSSHAG00000007024CPSF35968.460ENSFHEG00000012186CPSF39968.460Fundulus_heteroclitus
ENSSHAG00000007024CPSF39986.324ENSGMOG00000003157cpsf39886.324Gadus_morhua
ENSSHAG00000007024CPSF39995.448ENSGALG00000016424CPSF39995.448Gallus_gallus
ENSSHAG00000007024CPSF39282.035ENSGAFG00000019449cpsf39982.035Gambusia_affinis
ENSSHAG00000007024CPSF39988.218ENSGAFG00000008016CPSF39888.218Gambusia_affinis
ENSSHAG00000007024CPSF36893.362ENSGAGG00000025583CPSF39393.362Gopherus_agassizii
ENSSHAG00000007024CPSF310095.422ENSGGOG00000001757CPSF310097.638Gorilla_gorilla
ENSSHAG00000007024CPSF39985.316ENSHBUG00000001188cpsf39985.316Haplochromis_burtoni
ENSSHAG00000007024CPSF35980.988ENSHBUG00000014332CPSF39980.988Haplochromis_burtoni
ENSSHAG00000007024CPSF310095.760ENSHGLG00000000666CPSF39995.760Heterocephalus_glaber_female
ENSSHAG00000007024CPSF310095.760ENSHGLG00100007765CPSF39995.760Heterocephalus_glaber_male
ENSSHAG00000007024CPSF39986.618ENSHCOG00000015957CPSF39786.618Hippocampus_comes
ENSSHAG00000007024CPSF39984.457ENSHCOG00000007251cpsf39984.457Hippocampus_comes
ENSSHAG00000007024CPSF39986.471ENSIPUG00000023488cpsf39886.471Ictalurus_punctatus
ENSSHAG00000007024CPSF310097.661ENSSTOG00000004476CPSF310097.661Ictidomys_tridecemlineatus
ENSSHAG00000007024CPSF310096.637ENSJJAG00000023415Cpsf310096.637Jaculus_jaculus
ENSSHAG00000007024CPSF39984.118ENSKMAG00000002806cpsf39884.118Kryptolebias_marmoratus
ENSSHAG00000007024CPSF39987.794ENSKMAG00000007317CPSF39887.794Kryptolebias_marmoratus
ENSSHAG00000007024CPSF35579.357ENSLBEG00000015018-9979.357Labrus_bergylta
ENSSHAG00000007024CPSF39589.198ENSLBEG00000013492CPSF39889.198Labrus_bergylta
ENSSHAG00000007024CPSF39979.148ENSLBEG00000020569cpsf39479.148Labrus_bergylta
ENSSHAG00000007024CPSF39983.800ENSLACG00000008308CPSF39883.800Latimeria_chalumnae
ENSSHAG00000007024CPSF39990.015ENSLOCG00000016823cpsf39890.015Lepisosteus_oculatus
ENSSHAG00000007024CPSF39996.324ENSLAFG00000009467CPSF310096.324Loxodonta_africana
ENSSHAG00000007024CPSF310097.661ENSMFAG00000001339CPSF310097.661Macaca_fascicularis
ENSSHAG00000007024CPSF39597.527ENSMMUG00000018038CPSF310097.527Macaca_mulatta
ENSSHAG00000007024CPSF310084.942ENSMNEG00000039447CPSF310084.942Macaca_nemestrina
ENSSHAG00000007024CPSF310097.807ENSMLEG00000026825CPSF310097.807Mandrillus_leucophaeus
ENSSHAG00000007024CPSF39284.810ENSMAMG00000008835CPSF39984.810Mastacembelus_armatus
ENSSHAG00000007024CPSF39985.567ENSMAMG00000003076cpsf39885.567Mastacembelus_armatus
ENSSHAG00000007024CPSF39988.382ENSMZEG00005006258CPSF39888.382Maylandia_zebra
ENSSHAG00000007024CPSF39985.316ENSMZEG00005014358cpsf39985.316Maylandia_zebra
ENSSHAG00000007024CPSF39895.352ENSMGAG00000013995CPSF310095.352Meleagris_gallopavo
ENSSHAG00000007024CPSF35593.883ENSMAUG00000000166Cpsf310093.883Mesocricetus_auratus
ENSSHAG00000007024CPSF310092.398ENSMICG00000002363CPSF310092.398Microcebus_murinus
ENSSHAG00000007024CPSF310092.982ENSMOCG00000020067Cpsf310092.982Microtus_ochrogaster
ENSSHAG00000007024CPSF38071.472ENSMMOG00000011923CPSF38477.857Mola_mola
ENSSHAG00000007024CPSF39482.171ENSMMOG00000018212CPSF39882.171Mola_mola
ENSSHAG00000007024CPSF310097.974ENSMODG00000014703CPSF310097.974Monodelphis_domestica
ENSSHAG00000007024CPSF39383.125ENSMALG00000011474CPSF39983.125Monopterus_albus
ENSSHAG00000007024CPSF39985.463ENSMALG00000016416cpsf39985.463Monopterus_albus
ENSSHAG00000007024CPSF310096.930MGP_CAROLIEiJ_G0017640Cpsf310096.930Mus_caroli
ENSSHAG00000007024CPSF310096.930ENSMUSG00000054309Cpsf310096.930Mus_musculus
ENSSHAG00000007024CPSF310096.784MGP_PahariEiJ_G0029397Cpsf310096.784Mus_pahari
ENSSHAG00000007024CPSF310096.930MGP_SPRETEiJ_G0018481Cpsf310096.930Mus_spretus
ENSSHAG00000007024CPSF310097.368ENSMPUG00000013213CPSF310097.368Mustela_putorius_furo
ENSSHAG00000007024CPSF310096.788ENSMLUG00000010636CPSF310096.788Myotis_lucifugus
ENSSHAG00000007024CPSF310096.930ENSNGAG00000019836Cpsf310096.930Nannospalax_galili
ENSSHAG00000007024CPSF39286.190ENSNBRG00000010525CPSF39986.190Neolamprologus_brichardi
ENSSHAG00000007024CPSF39984.875ENSNBRG00000004770cpsf39984.875Neolamprologus_brichardi
ENSSHAG00000007024CPSF310097.661ENSNLEG00000013359CPSF310097.661Nomascus_leucogenys
ENSSHAG00000007024CPSF310067.105ENSMEUG00000013117-10067.105Notamacropus_eugenii
ENSSHAG00000007024CPSF310088.596ENSOPRG00000008902CPSF310088.596Ochotona_princeps
ENSSHAG00000007024CPSF310096.053ENSODEG00000003129CPSF310096.053Octodon_degus
ENSSHAG00000007024CPSF39985.316ENSONIG00000018812cpsf39985.316Oreochromis_niloticus
ENSSHAG00000007024CPSF38296.631ENSOANG00000008577CPSF310096.631Ornithorhynchus_anatinus
ENSSHAG00000007024CPSF310097.807ENSOCUG00000003728CPSF310097.807Oryctolagus_cuniculus
ENSSHAG00000007024CPSF39983.260ENSORLG00000018854cpsf39983.260Oryzias_latipes
ENSSHAG00000007024CPSF39983.113ENSORLG00020013331cpsf39983.113Oryzias_latipes_hni
ENSSHAG00000007024CPSF39983.260ENSORLG00015011017cpsf39983.260Oryzias_latipes_hsok
ENSSHAG00000007024CPSF39983.407ENSOMEG00000010647cpsf39483.407Oryzias_melastigma
ENSSHAG00000007024CPSF310087.573ENSOGAG00000001680CPSF310087.573Otolemur_garnettii
ENSSHAG00000007024CPSF310098.099ENSOARG00000015073CPSF310098.099Ovis_aries
ENSSHAG00000007024CPSF310097.807ENSPPAG00000042457CPSF310097.807Pan_paniscus
ENSSHAG00000007024CPSF310097.807ENSPPRG00000016790CPSF310097.807Panthera_pardus
ENSSHAG00000007024CPSF39997.794ENSPTIG00000003920CPSF310097.638Panthera_tigris_altaica
ENSSHAG00000007024CPSF310097.807ENSPTRG00000011638CPSF310097.807Pan_troglodytes
ENSSHAG00000007024CPSF310097.515ENSPANG00000016798CPSF310097.515Papio_anubis
ENSSHAG00000007024CPSF39989.412ENSPKIG00000023646cpsf39989.147Paramormyrops_kingsleyae
ENSSHAG00000007024CPSF39993.997ENSPSIG00000016144CPSF310093.997Pelodiscus_sinensis
ENSSHAG00000007024CPSF38087.681ENSPMGG00000006141-9587.681Periophthalmus_magnuspinnatus
ENSSHAG00000007024CPSF35978.519ENSPMGG00000015311CPSF39978.519Periophthalmus_magnuspinnatus
ENSSHAG00000007024CPSF310097.222ENSPEMG00000017668Cpsf310097.222Peromyscus_maniculatus_bairdii
ENSSHAG00000007024CPSF37890.317ENSPMAG00000004841cpsf39990.317Petromyzon_marinus
ENSSHAG00000007024CPSF39899.850ENSPCIG00000009823CPSF39899.850Phascolarctos_cinereus
ENSSHAG00000007024CPSF39984.604ENSPFOG00000015922cpsf39984.604Poecilia_formosa
ENSSHAG00000007024CPSF39987.923ENSPFOG00000010418-9887.923Poecilia_formosa
ENSSHAG00000007024CPSF39984.604ENSPLAG00000000882cpsf39984.604Poecilia_latipinna
ENSSHAG00000007024CPSF35980.941ENSPLAG00000021300-9980.941Poecilia_latipinna
ENSSHAG00000007024CPSF39984.751ENSPMEG00000018309cpsf39984.751Poecilia_mexicana
ENSSHAG00000007024CPSF39282.512ENSPREG00000014875cpsf39982.512Poecilia_reticulata
ENSSHAG00000007024CPSF39982.647ENSPREG00000004482CPSF39882.647Poecilia_reticulata
ENSSHAG00000007024CPSF310093.275ENSPPYG00000012666CPSF310093.275Pongo_abelii
ENSSHAG00000007024CPSF39563.134ENSPCAG00000015042CPSF310063.134Procavia_capensis
ENSSHAG00000007024CPSF38892.199ENSPCOG00000023016CPSF39892.199Propithecus_coquereli
ENSSHAG00000007024CPSF39997.654ENSPVAG00000005324CPSF39997.654Pteropus_vampyrus
ENSSHAG00000007024CPSF37991.529ENSPNYG00000021047CPSF39191.529Pundamilia_nyererei
ENSSHAG00000007024CPSF39985.316ENSPNYG00000004405cpsf39985.316Pundamilia_nyererei
ENSSHAG00000007024CPSF39986.765ENSPNAG00000023060cpsf39886.765Pygocentrus_nattereri
ENSSHAG00000007024CPSF39996.921ENSRNOG00000052418Cpsf39996.921Rattus_norvegicus
ENSSHAG00000007024CPSF310091.813ENSRBIG00000041615CPSF39993.045Rhinopithecus_bieti
ENSSHAG00000007024CPSF310097.807ENSRROG00000033792CPSF310097.807Rhinopithecus_roxellana
ENSSHAG00000007024CPSF39340.726YLR277CYSH19540.726Saccharomyces_cerevisiae
ENSSHAG00000007024CPSF310091.449ENSSBOG00000027263CPSF310091.449Saimiri_boliviensis_boliviensis
ENSSHAG00000007024CPSF39989.427ENSSFOG00015002108cpsf39989.427Scleropages_formosus
ENSSHAG00000007024CPSF39587.654ENSSMAG00000020534CPSF39587.654Scophthalmus_maximus
ENSSHAG00000007024CPSF39985.463ENSSDUG00000002828cpsf39685.463Seriola_dumerili
ENSSHAG00000007024CPSF39987.941ENSSDUG00000018498CPSF39887.941Seriola_dumerili
ENSSHAG00000007024CPSF39985.463ENSSLDG00000008469cpsf39190.508Seriola_lalandi_dorsalis
ENSSHAG00000007024CPSF39987.941ENSSLDG00000005234CPSF39887.941Seriola_lalandi_dorsalis
ENSSHAG00000007024CPSF310080.702ENSSARG00000005186CPSF310080.702Sorex_araneus
ENSSHAG00000007024CPSF39892.399ENSSPUG00000015525CPSF39792.399Sphenodon_punctatus
ENSSHAG00000007024CPSF39985.420ENSSPAG00000018579cpsf39885.420Stegastes_partitus
ENSSHAG00000007024CPSF39987.941ENSSPAG00000002906CPSF39887.941Stegastes_partitus
ENSSHAG00000007024CPSF39997.950ENSSSCG00000020799CPSF39997.950Sus_scrofa
ENSSHAG00000007024CPSF39995.301ENSTGUG00000013016CPSF39995.301Taeniopygia_guttata
ENSSHAG00000007024CPSF35972.973ENSTRUG00000013905CPSF39972.973Takifugu_rubripes
ENSSHAG00000007024CPSF39985.000ENSTRUG00000007030cpsf39785.000Takifugu_rubripes
ENSSHAG00000007024CPSF38593.699ENSTBEG00000002707CPSF38593.699Tupaia_belangeri
ENSSHAG00000007024CPSF38893.011ENSTTRG00000000861CPSF38893.011Tursiops_truncatus
ENSSHAG00000007024CPSF39995.015ENSUAMG00000007535CPSF39895.015Ursus_americanus
ENSSHAG00000007024CPSF39597.836ENSUMAG00000003676CPSF310097.836Ursus_maritimus
ENSSHAG00000007024CPSF39394.795ENSVPAG00000008041CPSF310094.795Vicugna_pacos
ENSSHAG00000007024CPSF310097.953ENSVVUG00000002194CPSF310097.953Vulpes_vulpes
ENSSHAG00000007024CPSF39989.574ENSXETG00000008263cpsf39889.574Xenopus_tropicalis
ENSSHAG00000007024CPSF35479.515ENSXCOG00000000957-8779.515Xiphophorus_couchianus
ENSSHAG00000007024CPSF39984.604ENSXCOG00000019695cpsf39984.604Xiphophorus_couchianus
ENSSHAG00000007024CPSF39988.071ENSXMAG00000027291CPSF39888.071Xiphophorus_maculatus
ENSSHAG00000007024CPSF39984.604ENSXMAG00000009784cpsf39984.604Xiphophorus_maculatus

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