EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000007084 (Gene tree)
Gene ID: 100926511
Gene Symbol: MRPS18C
Alias: CGI-134|FLJ11146|FLJ22967|MRPS18-1
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 5270 bases
Position: chrGL864774.1:283436-288705
Accession: 100926511
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000008176	Ribosomal_S18	PF01084.20	9.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000008243	MRPS18C-201	432	-	ENSSHAP00000008176	143 (aa)	XP_003773014	G3VYC1

Gene Model

Click here to download ENSSHAG00000007084's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000007084's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000007084	MRPS18C	94	75.735	ENSG00000163319	MRPS18C	92	75.735	Homo_sapiens
ENSSHAG00000007084	MRPS18C	63	93.333	ENSAMEG00000004915	MRPS18C	64	93.333	Ailuropoda_melanoleuca
ENSSHAG00000007084	MRPS18C	94	64.336	ENSANAG00000025323	-	88	64.336	Aotus_nancymaae
ENSSHAG00000007084	MRPS18C	94	65.441	ENSANAG00000028055	-	92	65.441	Aotus_nancymaae
ENSSHAG00000007084	MRPS18C	76	89.815	ENSBTAG00000018155	MRPS18C	76	89.815	Bos_taurus
ENSSHAG00000007084	MRPS18C	94	51.852	ENSBTAG00000049836	-	89	51.852	Bos_taurus
ENSSHAG00000007084	MRPS18C	100	73.611	ENSCJAG00000042247	MRPS18C	95	73.611	Callithrix_jacchus
ENSSHAG00000007084	MRPS18C	76	91.743	ENSCAFG00020010491	MRPS18C	76	91.743	Canis_lupus_dingo
ENSSHAG00000007084	MRPS18C	51	78.378	ENSCHIG00000019359	-	70	78.378	Capra_hircus
ENSSHAG00000007084	MRPS18C	97	75.362	ENSCHIG00000004461	-	95	75.362	Capra_hircus
ENSSHAG00000007084	MRPS18C	94	60.741	ENSCHIG00000018805	-	92	60.000	Capra_hircus
ENSSHAG00000007084	MRPS18C	69	80.808	ENSCHIG00000022740	-	73	80.808	Capra_hircus
ENSSHAG00000007084	MRPS18C	99	76.056	ENSTSYG00000012924	MRPS18C	97	76.056	Carlito_syrichta
ENSSHAG00000007084	MRPS18C	94	72.794	ENSCPOG00000009198	MRPS18C	92	72.794	Cavia_porcellus
ENSSHAG00000007084	MRPS18C	79	77.193	ENSCCAG00000028283	-	84	77.193	Cebus_capucinus
ENSSHAG00000007084	MRPS18C	94	77.206	ENSCCAG00000026577	-	92	77.206	Cebus_capucinus
ENSSHAG00000007084	MRPS18C	94	75.000	ENSCCAG00000019347	-	92	75.000	Cebus_capucinus
ENSSHAG00000007084	MRPS18C	94	63.235	ENSCCAG00000025155	-	87	63.235	Cebus_capucinus
ENSSHAG00000007084	MRPS18C	94	77.206	ENSCATG00000040697	MRPS18C	92	77.206	Cercocebus_atys
ENSSHAG00000007084	MRPS18C	99	72.727	ENSCLAG00000008205	-	97	72.727	Chinchilla_lanigera
ENSSHAG00000007084	MRPS18C	99	72.727	ENSCLAG00000017397	-	97	72.727	Chinchilla_lanigera
ENSSHAG00000007084	MRPS18C	94	77.206	ENSCANG00000038907	MRPS18C	92	77.206	Colobus_angolensis_palliatus
ENSSHAG00000007084	MRPS18C	72	77.670	ENSCANG00000041165	-	73	77.670	Colobus_angolensis_palliatus
ENSSHAG00000007084	MRPS18C	94	54.815	ENSCANG00000037347	-	74	73.256	Colobus_angolensis_palliatus
ENSSHAG00000007084	MRPS18C	87	81.746	ENSCGRG00001000103	Mrps18c	88	81.746	Cricetulus_griseus_chok1gshd
ENSSHAG00000007084	MRPS18C	87	81.746	ENSCGRG00000002192	Mrps18c	88	81.746	Cricetulus_griseus_crigri
ENSSHAG00000007084	MRPS18C	76	86.364	ENSDORG00000012749	Mrps18c	77	86.364	Dipodomys_ordii
ENSSHAG00000007084	MRPS18C	94	78.102	ENSEASG00005013234	MRPS18C	92	78.102	Equus_asinus_asinus
ENSSHAG00000007084	MRPS18C	94	78.102	ENSECAG00000020387	MRPS18C	92	78.102	Equus_caballus
ENSSHAG00000007084	MRPS18C	94	57.037	ENSEEUG00000003504	MRPS18C	92	57.037	Erinaceus_europaeus
ENSSHAG00000007084	MRPS18C	94	80.000	ENSFCAG00000042464	MRPS18C	92	80.000	Felis_catus
ENSSHAG00000007084	MRPS18C	94	62.500	ENSFDAG00000008778	-	92	62.500	Fukomys_damarensis
ENSSHAG00000007084	MRPS18C	76	85.455	ENSFDAG00000000250	-	76	85.455	Fukomys_damarensis
ENSSHAG00000007084	MRPS18C	76	56.881	ENSGGOG00000037903	-	69	56.881	Gorilla_gorilla
ENSSHAG00000007084	MRPS18C	100	59.028	ENSGGOG00000008603	MRPS18C	98	59.028	Gorilla_gorilla
ENSSHAG00000007084	MRPS18C	94	75.735	ENSHGLG00000002953	-	92	75.735	Heterocephalus_glaber_female
ENSSHAG00000007084	MRPS18C	76	83.636	ENSHGLG00000012671	-	81	83.636	Heterocephalus_glaber_female
ENSSHAG00000007084	MRPS18C	94	70.073	ENSHGLG00000020134	-	92	70.073	Heterocephalus_glaber_female
ENSSHAG00000007084	MRPS18C	94	70.073	ENSHGLG00100019678	-	92	70.073	Heterocephalus_glaber_male
ENSSHAG00000007084	MRPS18C	76	83.636	ENSHGLG00100015568	-	81	83.636	Heterocephalus_glaber_male
ENSSHAG00000007084	MRPS18C	94	75.735	ENSHGLG00100016235	-	92	75.735	Heterocephalus_glaber_male
ENSSHAG00000007084	MRPS18C	76	90.826	ENSSTOG00000007989	MRPS18C	76	90.826	Ictidomys_tridecemlineatus
ENSSHAG00000007084	MRPS18C	99	74.126	ENSLAFG00000001059	MRPS18C	97	74.126	Loxodonta_africana
ENSSHAG00000007084	MRPS18C	94	59.259	ENSMFAG00000041276	-	91	59.259	Macaca_fascicularis
ENSSHAG00000007084	MRPS18C	94	77.941	ENSMFAG00000003991	MRPS18C	92	77.941	Macaca_fascicularis
ENSSHAG00000007084	MRPS18C	94	60.294	ENSMMUG00000015353	MRPS18C	91	60.294	Macaca_mulatta
ENSSHAG00000007084	MRPS18C	94	68.116	ENSMMUG00000048717	-	92	68.116	Macaca_mulatta
ENSSHAG00000007084	MRPS18C	94	65.185	ENSMMUG00000039146	-	92	65.185	Macaca_mulatta
ENSSHAG00000007084	MRPS18C	94	57.037	ENSMNEG00000018700	-	91	57.037	Macaca_nemestrina
ENSSHAG00000007084	MRPS18C	94	77.941	ENSMNEG00000043663	MRPS18C	92	77.941	Macaca_nemestrina
ENSSHAG00000007084	MRPS18C	94	77.206	ENSMLEG00000038884	MRPS18C	92	77.206	Mandrillus_leucophaeus
ENSSHAG00000007084	MRPS18C	94	56.204	ENSMICG00000037615	-	91	56.204	Microcebus_murinus
ENSSHAG00000007084	MRPS18C	94	77.206	ENSMICG00000032609	-	92	77.206	Microcebus_murinus
ENSSHAG00000007084	MRPS18C	87	80.952	ENSMOCG00000015591	-	88	80.952	Microtus_ochrogaster
ENSSHAG00000007084	MRPS18C	94	76.471	ENSMOCG00000009898	-	92	76.471	Microtus_ochrogaster
ENSSHAG00000007084	MRPS18C	100	83.916	ENSMODG00000020773	MRPS18C	100	83.916	Monodelphis_domestica
ENSSHAG00000007084	MRPS18C	80	83.621	MGP_CAROLIEiJ_G0027458	Mrps18c	81	83.621	Mus_caroli
ENSSHAG00000007084	MRPS18C	80	84.483	ENSMUSG00000016833	Mrps18c	81	84.483	Mus_musculus
ENSSHAG00000007084	MRPS18C	80	84.483	MGP_PahariEiJ_G0017236	Mrps18c	81	84.483	Mus_pahari
ENSSHAG00000007084	MRPS18C	65	84.043	MGP_SPRETEiJ_G0028455	Mrps18c	73	84.043	Mus_spretus
ENSSHAG00000007084	MRPS18C	93	79.699	ENSMLUG00000017057	MRPS18C	91	79.699	Myotis_lucifugus
ENSSHAG00000007084	MRPS18C	88	80.315	ENSNGAG00000015980	Mrps18c	99	74.306	Nannospalax_galili
ENSSHAG00000007084	MRPS18C	94	71.111	ENSNLEG00000018188	-	92	71.111	Nomascus_leucogenys
ENSSHAG00000007084	MRPS18C	94	77.941	ENSNLEG00000009119	MRPS18C	92	77.941	Nomascus_leucogenys
ENSSHAG00000007084	MRPS18C	64	67.391	ENSOPRG00000004113	MRPS18C	61	67.391	Ochotona_princeps
ENSSHAG00000007084	MRPS18C	76	86.364	ENSODEG00000020349	-	76	86.364	Octodon_degus
ENSSHAG00000007084	MRPS18C	94	73.529	ENSODEG00000007599	-	92	73.529	Octodon_degus
ENSSHAG00000007084	MRPS18C	94	77.372	ENSOARG00000002770	MRPS18C	92	77.372	Ovis_aries
ENSSHAG00000007084	MRPS18C	76	57.798	ENSPPAG00000037400	-	69	57.798	Pan_paniscus
ENSSHAG00000007084	MRPS18C	94	75.735	ENSPPAG00000037122	MRPS18C	92	75.735	Pan_paniscus
ENSSHAG00000007084	MRPS18C	94	79.259	ENSPPRG00000011089	MRPS18C	92	79.259	Panthera_pardus
ENSSHAG00000007084	MRPS18C	100	75.862	ENSPTIG00000021242	MRPS18C	99	75.862	Panthera_tigris_altaica
ENSSHAG00000007084	MRPS18C	75	55.556	ENSPTRG00000047058	-	67	55.556	Pan_troglodytes
ENSSHAG00000007084	MRPS18C	94	75.735	ENSPTRG00000016233	MRPS18C	92	75.735	Pan_troglodytes
ENSSHAG00000007084	MRPS18C	94	65.185	ENSPANG00000034202	-	92	65.185	Papio_anubis
ENSSHAG00000007084	MRPS18C	94	77.206	ENSPANG00000033931	MRPS18C	92	77.206	Papio_anubis
ENSSHAG00000007084	MRPS18C	94	75.000	ENSPEMG00000008390	Mrps18c	92	75.000	Peromyscus_maniculatus_bairdii
ENSSHAG00000007084	MRPS18C	97	67.626	ENSPCIG00000000097	-	95	67.626	Phascolarctos_cinereus
ENSSHAG00000007084	MRPS18C	71	96.078	ENSPCIG00000019737	-	100	96.078	Phascolarctos_cinereus
ENSSHAG00000007084	MRPS18C	100	87.413	ENSPCIG00000005376	-	100	87.413	Phascolarctos_cinereus
ENSSHAG00000007084	MRPS18C	94	77.941	ENSPPYG00000025867	MRPS18C	92	77.941	Pongo_abelii
ENSSHAG00000007084	MRPS18C	94	72.593	ENSPPYG00000025835	-	93	72.593	Pongo_abelii
ENSSHAG00000007084	MRPS18C	99	69.718	ENSPCAG00000004975	MRPS18C	96	69.718	Procavia_capensis
ENSSHAG00000007084	MRPS18C	94	77.941	ENSPCOG00000017634	MRPS18C	92	77.941	Propithecus_coquereli
ENSSHAG00000007084	MRPS18C	65	74.468	ENSPVAG00000006439	MRPS18C	92	74.468	Pteropus_vampyrus
ENSSHAG00000007084	MRPS18C	85	74.436	ENSRNOG00000002178	Mrps18c	93	74.436	Rattus_norvegicus
ENSSHAG00000007084	MRPS18C	66	90.426	ENSRBIG00000035023	-	90	75.439	Rhinopithecus_bieti
ENSSHAG00000007084	MRPS18C	94	77.206	ENSRBIG00000041685	MRPS18C	92	77.206	Rhinopithecus_bieti
ENSSHAG00000007084	MRPS18C	66	90.426	ENSRROG00000033834	-	90	75.439	Rhinopithecus_roxellana
ENSSHAG00000007084	MRPS18C	94	77.206	ENSRROG00000044334	MRPS18C	92	77.206	Rhinopithecus_roxellana
ENSSHAG00000007084	MRPS18C	94	76.471	ENSSBOG00000027568	-	92	76.471	Saimiri_boliviensis_boliviensis
ENSSHAG00000007084	MRPS18C	68	73.196	ENSSBOG00000029234	-	72	73.196	Saimiri_boliviensis_boliviensis
ENSSHAG00000007084	MRPS18C	76	76.364	ENSSBOG00000032292	-	79	76.364	Saimiri_boliviensis_boliviensis
ENSSHAG00000007084	MRPS18C	94	67.647	ENSSBOG00000022205	-	86	67.647	Saimiri_boliviensis_boliviensis
ENSSHAG00000007084	MRPS18C	76	92.661	ENSSSCG00000038042	MRPS18C	76	92.661	Sus_scrofa
ENSSHAG00000007084	MRPS18C	94	73.529	ENSTBEG00000012505	MRPS18C	92	73.529	Tupaia_belangeri
ENSSHAG00000007084	MRPS18C	76	93.578	ENSTTRG00000004897	MRPS18C	76	93.578	Tursiops_truncatus
ENSSHAG00000007084	MRPS18C	94	81.022	ENSUAMG00000012878	MRPS18C	92	81.022	Ursus_americanus
ENSSHAG00000007084	MRPS18C	94	81.022	ENSUMAG00000008829	MRPS18C	92	81.022	Ursus_maritimus
ENSSHAG00000007084	MRPS18C	94	80.000	ENSVPAG00000011358	MRPS18C	92	80.000	Vicugna_pacos
ENSSHAG00000007084	MRPS18C	94	78.986	ENSVVUG00000015672	MRPS18C	92	78.986	Vulpes_vulpes