EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000007152 (Gene tree)
Gene ID: 100933991
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 8747 bases
Position: chrGL849722.1:289386-298132
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000008257	SYF2	PF08231.12	1.4e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000008324	-	621	-	ENSSHAP00000008257	206 (aa)	-	G3VYK2

Gene Model

Click here to download ENSSHAG00000007152's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000007152's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000007152	-	100	97.087	ENSSHAG00000015630	-	82	97.087

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000007152	-	100	93.204	ENSG00000117614	SYF2	84	93.204	Homo_sapiens
ENSSHAG00000007152	-	100	84.466	ENSAPOG00000001174	syf2	86	84.466	Acanthochromis_polyacanthus
ENSSHAG00000007152	-	100	92.233	ENSAMEG00000010115	-	84	92.233	Ailuropoda_melanoleuca
ENSSHAG00000007152	-	95	93.333	ENSAMEG00000010134	-	100	93.333	Ailuropoda_melanoleuca
ENSSHAG00000007152	-	100	81.553	ENSACIG00000023688	syf2	82	81.553	Amphilophus_citrinellus
ENSSHAG00000007152	-	100	84.951	ENSAOCG00000022046	syf2	87	84.951	Amphiprion_ocellaris
ENSSHAG00000007152	-	92	83.598	ENSAOCG00000010912	syf2	59	83.598	Amphiprion_ocellaris
ENSSHAG00000007152	-	100	84.951	ENSAPEG00000018858	syf2	79	84.951	Amphiprion_percula
ENSSHAG00000007152	-	100	83.495	ENSATEG00000007745	syf2	86	83.495	Anabas_testudineus
ENSSHAG00000007152	-	97	91.457	ENSAPLG00000016435	SYF2	99	91.457	Anas_platyrhynchos
ENSSHAG00000007152	-	97	88.945	ENSACAG00000013653	-	98	88.945	Anolis_carolinensis
ENSSHAG00000007152	-	81	77.246	ENSACAG00000026777	-	100	77.246	Anolis_carolinensis
ENSSHAG00000007152	-	100	94.175	ENSANAG00000032473	SYF2	84	94.175	Aotus_nancymaae
ENSSHAG00000007152	-	100	81.553	ENSACLG00000019916	syf2	86	81.553	Astatotilapia_calliptera
ENSSHAG00000007152	-	100	83.010	ENSAMXG00000004051	syf2	86	83.010	Astyanax_mexicanus
ENSSHAG00000007152	-	100	93.204	ENSBTAG00000001651	SYF2	87	93.204	Bos_taurus
ENSSHAG00000007152	-	96	52.261	WBGene00019402	syf-2	85	52.261	Caenorhabditis_elegans
ENSSHAG00000007152	-	100	94.175	ENSCJAG00000046570	SYF2	84	94.175	Callithrix_jacchus
ENSSHAG00000007152	-	99	89.268	ENSCAFG00000030331	-	89	89.268	Canis_familiaris
ENSSHAG00000007152	-	100	92.718	ENSCAFG00000012895	-	83	92.718	Canis_familiaris
ENSSHAG00000007152	-	88	85.714	ENSCAFG00020021094	-	95	85.714	Canis_lupus_dingo
ENSSHAG00000007152	-	100	92.718	ENSCAFG00020021091	-	83	92.718	Canis_lupus_dingo
ENSSHAG00000007152	-	100	93.204	ENSCHIG00000020874	SYF2	85	93.204	Capra_hircus
ENSSHAG00000007152	-	100	93.689	ENSTSYG00000005114	SYF2	84	93.689	Carlito_syrichta
ENSSHAG00000007152	-	96	94.444	ENSCAPG00000010006	SYF2	100	94.444	Cavia_aperea
ENSSHAG00000007152	-	100	93.204	ENSCPOG00000005326	SYF2	84	93.204	Cavia_porcellus
ENSSHAG00000007152	-	100	94.175	ENSCCAG00000022459	SYF2	84	94.175	Cebus_capucinus
ENSSHAG00000007152	-	97	94.472	ENSCATG00000026917	SYF2	82	94.472	Cercocebus_atys
ENSSHAG00000007152	-	100	94.175	ENSCLAG00000008474	SYF2	84	94.175	Chinchilla_lanigera
ENSSHAG00000007152	-	97	94.472	ENSCSAG00000000948	SYF2	82	94.472	Chlorocebus_sabaeus
ENSSHAG00000007152	-	63	87.597	ENSCHOG00000005273	-	79	87.597	Choloepus_hoffmanni
ENSSHAG00000007152	-	100	90.291	ENSCPBG00000025073	SYF2	83	90.291	Chrysemys_picta_bellii
ENSSHAG00000007152	-	98	54.412	ENSCING00000003017	-	85	53.922	Ciona_intestinalis
ENSSHAG00000007152	-	98	53.431	ENSCSAVG00000006627	-	93	53.431	Ciona_savignyi
ENSSHAG00000007152	-	97	79.397	ENSCANG00000037322	SYF2	79	79.397	Colobus_angolensis_palliatus
ENSSHAG00000007152	-	100	90.777	ENSCGRG00001020733	Syf2	85	90.777	Cricetulus_griseus_chok1gshd
ENSSHAG00000007152	-	95	92.347	ENSCGRG00000005095	Syf2	96	91.960	Cricetulus_griseus_crigri
ENSSHAG00000007152	-	100	79.126	ENSCSEG00000000117	syf2	86	79.126	Cynoglossus_semilaevis
ENSSHAG00000007152	-	100	81.553	ENSCVAG00000019543	syf2	86	81.553	Cyprinodon_variegatus
ENSSHAG00000007152	-	100	83.495	ENSDARG00000004706	syf2	86	83.495	Danio_rerio
ENSSHAG00000007152	-	100	92.233	ENSDNOG00000047605	SYF2	84	92.233	Dasypus_novemcinctus
ENSSHAG00000007152	-	100	94.175	ENSDORG00000001274	Syf2	84	94.175	Dipodomys_ordii
ENSSHAG00000007152	-	98	57.843	FBgn0033556	CG12343	90	57.843	Drosophila_melanogaster
ENSSHAG00000007152	-	93	75.000	ENSETEG00000015729	SYF2	83	75.000	Echinops_telfairi
ENSSHAG00000007152	-	96	59.898	ENSEBUG00000015402	syf2	95	59.898	Eptatretus_burgeri
ENSSHAG00000007152	-	100	93.689	ENSEASG00005004224	-	84	93.689	Equus_asinus_asinus
ENSSHAG00000007152	-	100	81.068	ENSEASG00005004232	-	85	81.068	Equus_asinus_asinus
ENSSHAG00000007152	-	100	93.689	ENSECAG00000010440	-	86	93.689	Equus_caballus
ENSSHAG00000007152	-	100	93.689	ENSECAG00000012023	-	84	93.689	Equus_caballus
ENSSHAG00000007152	-	70	82.069	ENSEEUG00000015084	SYF2	79	82.069	Erinaceus_europaeus
ENSSHAG00000007152	-	100	84.951	ENSELUG00000003465	syf2	86	84.951	Esox_lucius
ENSSHAG00000007152	-	100	94.660	ENSFCAG00000010324	-	71	94.660	Felis_catus
ENSSHAG00000007152	-	100	92.718	ENSFCAG00000043095	-	83	92.718	Felis_catus
ENSSHAG00000007152	-	96	88.384	ENSFALG00000000460	SYF2	83	86.893	Ficedula_albicollis
ENSSHAG00000007152	-	100	93.689	ENSFDAG00000008310	SYF2	84	93.689	Fukomys_damarensis
ENSSHAG00000007152	-	100	66.667	ENSFHEG00000007238	syf2	91	66.667	Fundulus_heteroclitus
ENSSHAG00000007152	-	100	82.524	ENSGMOG00000019138	syf2	92	82.524	Gadus_morhua
ENSSHAG00000007152	-	100	90.291	ENSGALG00000013639	SYF2	81	90.291	Gallus_gallus
ENSSHAG00000007152	-	100	80.097	ENSGAFG00000019435	syf2	86	80.097	Gambusia_affinis
ENSSHAG00000007152	-	100	82.524	ENSGACG00000007305	syf2	86	82.524	Gasterosteus_aculeatus
ENSSHAG00000007152	-	100	90.777	ENSGAGG00000010670	SYF2	83	90.777	Gopherus_agassizii
ENSSHAG00000007152	-	100	93.689	ENSGGOG00000012796	SYF2	84	93.689	Gorilla_gorilla
ENSSHAG00000007152	-	100	81.553	ENSHBUG00000020477	syf2	88	81.553	Haplochromis_burtoni
ENSSHAG00000007152	-	100	94.660	ENSHGLG00000014393	SYF2	84	94.660	Heterocephalus_glaber_female
ENSSHAG00000007152	-	100	81.068	ENSHGLG00000004304	-	85	81.553	Heterocephalus_glaber_female
ENSSHAG00000007152	-	100	94.660	ENSHGLG00100014722	SYF2	84	94.660	Heterocephalus_glaber_male
ENSSHAG00000007152	-	100	83.010	ENSHCOG00000012904	syf2	67	83.010	Hippocampus_comes
ENSSHAG00000007152	-	100	83.981	ENSIPUG00000019859	syf2	86	83.981	Ictalurus_punctatus
ENSSHAG00000007152	-	71	93.151	ENSSTOG00000023984	SYF2	100	93.151	Ictidomys_tridecemlineatus
ENSSHAG00000007152	-	97	94.000	ENSJJAG00000013301	Syf2	95	94.000	Jaculus_jaculus
ENSSHAG00000007152	-	100	82.039	ENSKMAG00000013856	syf2	86	82.039	Kryptolebias_marmoratus
ENSSHAG00000007152	-	100	83.981	ENSLBEG00000014425	syf2	86	83.981	Labrus_bergylta
ENSSHAG00000007152	-	100	84.466	ENSLACG00000012064	SYF2	86	84.466	Latimeria_chalumnae
ENSSHAG00000007152	-	100	83.981	ENSLOCG00000002728	syf2	82	83.981	Lepisosteus_oculatus
ENSSHAG00000007152	-	87	63.889	ENSLAFG00000030814	-	97	63.889	Loxodonta_africana
ENSSHAG00000007152	-	100	92.233	ENSLAFG00000023150	-	84	92.233	Loxodonta_africana
ENSSHAG00000007152	-	97	94.472	ENSMFAG00000041831	SYF2	82	94.472	Macaca_fascicularis
ENSSHAG00000007152	-	97	94.472	ENSMMUG00000002968	SYF2	82	94.472	Macaca_mulatta
ENSSHAG00000007152	-	97	94.472	ENSMNEG00000030180	SYF2	82	94.472	Macaca_nemestrina
ENSSHAG00000007152	-	97	94.472	ENSMLEG00000030248	SYF2	82	94.472	Mandrillus_leucophaeus
ENSSHAG00000007152	-	100	81.068	ENSMAMG00000010403	syf2	85	81.068	Mastacembelus_armatus
ENSSHAG00000007152	-	100	81.553	ENSMZEG00005006429	syf2	86	81.553	Maylandia_zebra
ENSSHAG00000007152	-	97	91.457	ENSMGAG00000002019	SYF2	100	91.457	Meleagris_gallopavo
ENSSHAG00000007152	-	100	91.748	ENSMAUG00000018974	Syf2	85	91.748	Mesocricetus_auratus
ENSSHAG00000007152	-	97	94.975	ENSMICG00000016191	SYF2	100	94.975	Microcebus_murinus
ENSSHAG00000007152	-	100	91.748	ENSMOCG00000022938	Syf2	85	91.748	Microtus_ochrogaster
ENSSHAG00000007152	-	100	80.583	ENSMMOG00000002396	syf2	86	80.583	Mola_mola
ENSSHAG00000007152	-	100	89.904	ENSMODG00000013951	-	90	89.904	Monodelphis_domestica
ENSSHAG00000007152	-	100	81.159	ENSMALG00000010706	syf2	85	81.643	Monopterus_albus
ENSSHAG00000007152	-	100	91.262	MGP_CAROLIEiJ_G0026633	Syf2	85	91.262	Mus_caroli
ENSSHAG00000007152	-	100	91.262	ENSMUSG00000028821	Syf2	85	91.262	Mus_musculus
ENSSHAG00000007152	-	100	91.262	MGP_PahariEiJ_G0028966	Syf2	85	91.262	Mus_pahari
ENSSHAG00000007152	-	100	91.262	MGP_SPRETEiJ_G0027613	Syf2	85	91.262	Mus_spretus
ENSSHAG00000007152	-	100	92.233	ENSMPUG00000015802	-	83	92.233	Mustela_putorius_furo
ENSSHAG00000007152	-	100	93.689	ENSMPUG00000015801	-	83	93.689	Mustela_putorius_furo
ENSSHAG00000007152	-	100	92.233	ENSMLUG00000001885	SYF2	84	92.233	Myotis_lucifugus
ENSSHAG00000007152	-	100	93.204	ENSNGAG00000007912	Syf2	83	93.204	Nannospalax_galili
ENSSHAG00000007152	-	100	73.301	ENSNBRG00000010720	syf2	88	72.857	Neolamprologus_brichardi
ENSSHAG00000007152	-	100	93.689	ENSNLEG00000035185	SYF2	84	93.689	Nomascus_leucogenys
ENSSHAG00000007152	-	100	91.262	ENSOPRG00000012870	SYF2	84	91.262	Ochotona_princeps
ENSSHAG00000007152	-	100	92.718	ENSODEG00000017664	-	86	92.718	Octodon_degus
ENSSHAG00000007152	-	100	81.068	ENSODEG00000014338	-	84	81.068	Octodon_degus
ENSSHAG00000007152	-	100	81.068	ENSONIG00000008213	syf2	86	81.068	Oreochromis_niloticus
ENSSHAG00000007152	-	97	93.970	ENSOANG00000009552	SYF2	99	93.970	Ornithorhynchus_anatinus
ENSSHAG00000007152	-	100	93.204	ENSOCUG00000013050	SYF2	84	93.204	Oryctolagus_cuniculus
ENSSHAG00000007152	-	100	83.010	ENSORLG00000028820	syf2	88	83.010	Oryzias_latipes
ENSSHAG00000007152	-	100	83.010	ENSORLG00020018333	syf2	86	83.010	Oryzias_latipes_hni
ENSSHAG00000007152	-	100	83.010	ENSORLG00015014665	syf2	86	83.010	Oryzias_latipes_hsok
ENSSHAG00000007152	-	100	83.495	ENSOMEG00000013911	syf2	86	83.495	Oryzias_melastigma
ENSSHAG00000007152	-	100	94.175	ENSOGAG00000009962	SYF2	84	94.175	Otolemur_garnettii
ENSSHAG00000007152	-	100	92.308	ENSOARG00000006348	-	84	92.308	Ovis_aries
ENSSHAG00000007152	-	95	66.154	ENSOARG00000006269	-	100	66.154	Ovis_aries
ENSSHAG00000007152	-	100	93.689	ENSPPAG00000036579	SYF2	84	93.689	Pan_paniscus
ENSSHAG00000007152	-	100	94.660	ENSPPRG00000001638	-	83	94.660	Panthera_pardus
ENSSHAG00000007152	-	100	92.718	ENSPPRG00000001651	-	83	92.718	Panthera_pardus
ENSSHAG00000007152	-	100	92.718	ENSPTIG00000007036	-	83	92.718	Panthera_tigris_altaica
ENSSHAG00000007152	-	100	94.660	ENSPTIG00000005711	-	75	94.660	Panthera_tigris_altaica
ENSSHAG00000007152	-	100	93.689	ENSPTRG00000000352	SYF2	84	93.689	Pan_troglodytes
ENSSHAG00000007152	-	97	94.472	ENSPANG00000008139	SYF2	82	94.472	Papio_anubis
ENSSHAG00000007152	-	100	83.981	ENSPKIG00000008130	syf2	87	83.981	Paramormyrops_kingsleyae
ENSSHAG00000007152	-	100	89.806	ENSPSIG00000011816	SYF2	80	89.806	Pelodiscus_sinensis
ENSSHAG00000007152	-	100	80.583	ENSPMGG00000008755	syf2	80	80.583	Periophthalmus_magnuspinnatus
ENSSHAG00000007152	-	100	91.262	ENSPEMG00000008283	Syf2	85	91.262	Peromyscus_maniculatus_bairdii
ENSSHAG00000007152	-	100	96.602	ENSPCIG00000014235	SYF2	82	96.602	Phascolarctos_cinereus
ENSSHAG00000007152	-	100	80.583	ENSPFOG00000004116	syf2	85	80.583	Poecilia_formosa
ENSSHAG00000007152	-	100	80.583	ENSPLAG00000006691	syf2	88	80.583	Poecilia_latipinna
ENSSHAG00000007152	-	100	77.184	ENSPMEG00000011684	syf2	88	77.184	Poecilia_mexicana
ENSSHAG00000007152	-	100	80.583	ENSPREG00000003009	syf2	86	80.583	Poecilia_reticulata
ENSSHAG00000007152	-	100	93.689	ENSPPYG00000001713	SYF2	84	93.689	Pongo_abelii
ENSSHAG00000007152	-	77	75.472	ENSPCOG00000027011	SYF2	75	75.472	Propithecus_coquereli
ENSSHAG00000007152	-	100	80.583	ENSPVAG00000005841	SYF2	84	80.583	Pteropus_vampyrus
ENSSHAG00000007152	-	100	81.553	ENSPNYG00000004979	syf2	86	81.553	Pundamilia_nyererei
ENSSHAG00000007152	-	100	84.951	ENSPNAG00000015570	syf2	86	84.951	Pygocentrus_nattereri
ENSSHAG00000007152	-	100	91.262	ENSRNOG00000060597	Syf2	85	91.262	Rattus_norvegicus
ENSSHAG00000007152	-	97	91.457	ENSRBIG00000042970	SYF2	82	91.457	Rhinopithecus_bieti
ENSSHAG00000007152	-	97	94.472	ENSRROG00000001347	SYF2	82	94.472	Rhinopithecus_roxellana
ENSSHAG00000007152	-	100	93.689	ENSSBOG00000020184	SYF2	84	93.689	Saimiri_boliviensis_boliviensis
ENSSHAG00000007152	-	100	83.495	ENSSFOG00015023647	syf2	86	83.495	Scleropages_formosus
ENSSHAG00000007152	-	100	81.553	ENSSMAG00000009867	syf2	86	81.553	Scophthalmus_maximus
ENSSHAG00000007152	-	100	82.524	ENSSDUG00000013072	syf2	86	82.524	Seriola_dumerili
ENSSHAG00000007152	-	100	82.524	ENSSLDG00000012677	syf2	86	82.524	Seriola_lalandi_dorsalis
ENSSHAG00000007152	-	76	91.720	ENSSARG00000012889	SYF2	64	91.720	Sorex_araneus
ENSSHAG00000007152	-	100	88.350	ENSSPUG00000005251	SYF2	81	88.350	Sphenodon_punctatus
ENSSHAG00000007152	-	100	82.039	ENSSPAG00000009626	syf2	86	82.039	Stegastes_partitus
ENSSHAG00000007152	-	100	93.204	ENSSSCG00000037481	SYF2	84	93.204	Sus_scrofa
ENSSHAG00000007152	-	65	64.444	ENSTGUG00000001126	SYF2	51	79.412	Taeniopygia_guttata
ENSSHAG00000007152	-	100	80.097	ENSTRUG00000001499	syf2	82	80.097	Takifugu_rubripes
ENSSHAG00000007152	-	100	78.641	ENSTNIG00000016912	syf2	92	78.641	Tetraodon_nigroviridis
ENSSHAG00000007152	-	100	66.505	ENSTBEG00000017370	SYF2	81	66.505	Tupaia_belangeri
ENSSHAG00000007152	-	100	93.204	ENSTTRG00000003550	SYF2	84	93.204	Tursiops_truncatus
ENSSHAG00000007152	-	100	91.748	ENSUAMG00000002897	SYF2	83	91.748	Ursus_americanus
ENSSHAG00000007152	-	100	91.748	ENSUMAG00000013108	SYF2	83	91.748	Ursus_maritimus
ENSSHAG00000007152	-	100	91.748	ENSVPAG00000005705	SYF2	84	91.748	Vicugna_pacos
ENSSHAG00000007152	-	100	92.718	ENSVVUG00000027175	-	83	92.718	Vulpes_vulpes
ENSSHAG00000007152	-	100	92.718	ENSVVUG00000027181	-	83	92.718	Vulpes_vulpes
ENSSHAG00000007152	-	98	85.572	ENSXETG00000022797	syf2	81	85.572	Xenopus_tropicalis
ENSSHAG00000007152	-	100	80.583	ENSXMAG00000022698	syf2	86	80.583	Xiphophorus_maculatus