EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000007338 (Gene tree)
Gene ID: 100920762
Gene Symbol: -
Alias: -
Full Name: NYN domain and retroviral integrase containing
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 34960 bases
Position: chrGL834498.1:307762-342721
Accession: 100920762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000008471	RNase_Zc3h12a	PF11977.8	1.5e-59	1	1
ENSSHAP00000008470	RNase_Zc3h12a	PF11977.8	1.6e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000008539	-	5883	-	ENSSHAP00000008470	1809 (aa)	XP_003755952	G3VZ65
ENSSHAT00000008540	-	5613	-	ENSSHAP00000008471	1719 (aa)	-	G3VZ66

Gene Model

Click here to download ENSSHAG00000007338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000007338's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000007338	-	97	54.947	ENSG00000205978	NYNRIN	88	55.029	Homo_sapiens
ENSSHAG00000007338	-	96	55.172	ENSAMEG00000015934	NYNRIN	87	55.300	Ailuropoda_melanoleuca
ENSSHAG00000007338	-	90	57.292	ENSANAG00000036690	NYNRIN	82	57.366	Aotus_nancymaae
ENSSHAG00000007338	-	95	55.229	ENSBTAG00000007149	NYNRIN	87	55.229	Bos_taurus
ENSSHAG00000007338	-	93	57.552	ENSCJAG00000006385	NYNRIN	85	57.639	Callithrix_jacchus
ENSSHAG00000007338	-	93	57.712	ENSCAFG00000012390	NYNRIN	84	57.712	Canis_familiaris
ENSSHAG00000007338	-	93	57.452	ENSCAFG00020024302	NYNRIN	83	57.452	Canis_lupus_dingo
ENSSHAG00000007338	-	99	52.941	ENSCHIG00000017197	NYNRIN	90	55.256	Capra_hircus
ENSSHAG00000007338	-	93	56.957	ENSTSYG00000036783	NYNRIN	85	56.957	Carlito_syrichta
ENSSHAG00000007338	-	97	54.776	ENSCPOG00000014420	NYNRIN	86	54.776	Cavia_porcellus
ENSSHAG00000007338	-	92	57.205	ENSCCAG00000032076	NYNRIN	84	57.292	Cebus_capucinus
ENSSHAG00000007338	-	93	55.074	ENSCATG00000034653	NYNRIN	85	55.256	Cercocebus_atys
ENSSHAG00000007338	-	96	55.257	ENSCLAG00000009622	NYNRIN	87	55.155	Chinchilla_lanigera
ENSSHAG00000007338	-	93	57.292	ENSCSAG00000015855	NYNRIN	85	57.378	Chlorocebus_sabaeus
ENSSHAG00000007338	-	93	56.944	ENSCANG00000033188	NYNRIN	85	57.031	Colobus_angolensis_palliatus
ENSSHAG00000007338	-	90	55.986	ENSCGRG00001008471	Nynrin	85	55.965	Cricetulus_griseus_chok1gshd
ENSSHAG00000007338	-	90	55.986	ENSCGRG00000014985	Nynrin	85	55.965	Cricetulus_griseus_crigri
ENSSHAG00000007338	-	92	56.213	ENSDNOG00000049474	NYNRIN	85	56.213	Dasypus_novemcinctus
ENSSHAG00000007338	-	92	56.578	ENSEASG00005012250	NYNRIN	83	56.604	Equus_asinus_asinus
ENSSHAG00000007338	-	93	56.552	ENSECAG00000016595	NYNRIN	83	56.518	Equus_caballus
ENSSHAG00000007338	-	93	57.366	ENSFCAG00000022114	NYNRIN	84	57.279	Felis_catus
ENSSHAG00000007338	-	85	56.780	ENSFDAG00000013425	NYNRIN	82	56.780	Fukomys_damarensis
ENSSHAG00000007338	-	93	57.031	ENSGGOG00000016176	NYNRIN	85	57.118	Gorilla_gorilla
ENSSHAG00000007338	-	91	56.574	ENSHGLG00000002148	NYNRIN	84	56.560	Heterocephalus_glaber_female
ENSSHAG00000007338	-	88	56.574	ENSHGLG00100010082	NYNRIN	84	56.560	Heterocephalus_glaber_male
ENSSHAG00000007338	-	91	56.537	ENSSTOG00000024004	NYNRIN	82	56.412	Ictidomys_tridecemlineatus
ENSSHAG00000007338	-	92	57.367	ENSJJAG00000022144	Nynrin	87	57.367	Jaculus_jaculus
ENSSHAG00000007338	-	96	55.130	ENSLAFG00000014582	NYNRIN	87	55.102	Loxodonta_africana
ENSSHAG00000007338	-	93	57.292	ENSMFAG00000042133	NYNRIN	85	57.378	Macaca_fascicularis
ENSSHAG00000007338	-	93	57.292	ENSMMUG00000009513	NYNRIN	85	57.378	Macaca_mulatta
ENSSHAG00000007338	-	93	57.292	ENSMNEG00000032900	NYNRIN	85	57.378	Macaca_nemestrina
ENSSHAG00000007338	-	93	57.205	ENSMLEG00000043583	NYNRIN	85	57.292	Mandrillus_leucophaeus
ENSSHAG00000007338	-	91	53.414	ENSMAUG00000008402	Nynrin	85	53.385	Mesocricetus_auratus
ENSSHAG00000007338	-	92	56.477	ENSMICG00000031725	NYNRIN	84	56.563	Microcebus_murinus
ENSSHAG00000007338	-	92	54.395	ENSMOCG00000008482	Nynrin	87	54.395	Microtus_ochrogaster
ENSSHAG00000007338	-	93	91.352	ENSMODG00000002972	-	98	89.728	Monodelphis_domestica
ENSSHAG00000007338	-	95	55.343	MGP_CAROLIEiJ_G0019322	Nynrin	89	55.343	Mus_caroli
ENSSHAG00000007338	-	93	54.909	ENSMUSG00000075592	Nynrin	88	54.909	Mus_musculus
ENSSHAG00000007338	-	92	54.996	MGP_PahariEiJ_G0030339	Nynrin	85	54.996	Mus_pahari
ENSSHAG00000007338	-	93	54.996	MGP_SPRETEiJ_G0020211	Nynrin	87	54.996	Mus_spretus
ENSSHAG00000007338	-	95	55.695	ENSMPUG00000005656	NYNRIN	86	55.695	Mustela_putorius_furo
ENSSHAG00000007338	-	95	53.283	ENSMLUG00000011291	NYNRIN	87	53.283	Myotis_lucifugus
ENSSHAG00000007338	-	91	56.353	ENSNGAG00000013937	Nynrin	86	56.822	Nannospalax_galili
ENSSHAG00000007338	-	93	56.722	ENSNLEG00000015511	NYNRIN	85	56.820	Nomascus_leucogenys
ENSSHAG00000007338	-	97	54.262	ENSODEG00000001595	NYNRIN	92	54.262	Octodon_degus
ENSSHAG00000007338	-	92	57.193	ENSOCUG00000015163	NYNRIN	84	57.193	Oryctolagus_cuniculus
ENSSHAG00000007338	-	93	57.031	ENSOGAG00000024360	NYNRIN	85	57.031	Otolemur_garnettii
ENSSHAG00000007338	-	99	53.028	ENSOARG00000019074	NYNRIN	91	52.984	Ovis_aries
ENSSHAG00000007338	-	97	54.947	ENSPPAG00000028719	NYNRIN	88	55.029	Pan_paniscus
ENSSHAG00000007338	-	93	57.626	ENSPPRG00000004961	NYNRIN	84	57.539	Panthera_pardus
ENSSHAG00000007338	-	96	54.691	ENSPTIG00000016800	NYNRIN	88	54.611	Panthera_tigris_altaica
ENSSHAG00000007338	-	97	54.947	ENSPTRG00000006219	NYNRIN	88	55.029	Pan_troglodytes
ENSSHAG00000007338	-	93	57.292	ENSPANG00000018562	NYNRIN	85	57.292	Papio_anubis
ENSSHAG00000007338	-	91	54.864	ENSPEMG00000018953	Nynrin	85	54.864	Peromyscus_maniculatus_bairdii
ENSSHAG00000007338	-	93	56.944	ENSPPYG00000005705	NYNRIN	85	57.031	Pongo_abelii
ENSSHAG00000007338	-	93	56.473	ENSPCOG00000027737	NYNRIN	85	56.473	Propithecus_coquereli
ENSSHAG00000007338	-	91	54.301	ENSRNOG00000048431	Nynrin	85	54.301	Rattus_norvegicus
ENSSHAG00000007338	-	93	57.168	ENSRBIG00000030244	NYNRIN	85	57.267	Rhinopithecus_bieti
ENSSHAG00000007338	-	93	57.118	ENSRROG00000037811	NYNRIN	85	57.217	Rhinopithecus_roxellana
ENSSHAG00000007338	-	93	57.378	ENSSBOG00000023644	NYNRIN	84	57.465	Saimiri_boliviensis_boliviensis
ENSSHAG00000007338	-	77	55.167	ENSSSCG00000032473	NYNRIN	81	55.248	Sus_scrofa
ENSSHAG00000007338	-	96	55.328	ENSUAMG00000007019	NYNRIN	87	55.220	Ursus_americanus
ENSSHAG00000007338	-	94	54.405	ENSUMAG00000022954	NYNRIN	88	54.323	Ursus_maritimus
ENSSHAG00000007338	-	92	57.626	ENSVVUG00000029210	NYNRIN	83	57.626	Vulpes_vulpes