EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000007360 (Gene tree)
Gene ID: -
Gene Symbol: LRRC47
Alias: KIAA1185|RP1-286D6.3
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 12663 bases
Position: chrGL849764.1:310125-322787
Accession: 29207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000008496	B3_4	PF03483.17	8.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000008565	LRRC47-201	1755	-	ENSSHAP00000008496	584 (aa)	-	G3VZ91

Gene Model

Click here to download ENSSHAG00000007360's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000007360's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000007360	LRRC47	100	62.121	ENSG00000130764	LRRC47	98	62.436	Homo_sapiens
ENSSHAG00000007360	LRRC47	98	49.742	ENSAPOG00000019553	lrrc47	99	49.308	Acanthochromis_polyacanthus
ENSSHAG00000007360	LRRC47	73	67.290	ENSAMEG00000009152	LRRC47	93	66.042	Ailuropoda_melanoleuca
ENSSHAG00000007360	LRRC47	66	71.354	ENSAPLG00000003167	LRRC47	100	71.354	Anas_platyrhynchos
ENSSHAG00000007360	LRRC47	64	69.681	ENSACAG00000008267	LRRC47	99	66.667	Anolis_carolinensis
ENSSHAG00000007360	LRRC47	100	61.448	ENSANAG00000025576	LRRC47	98	61.750	Aotus_nancymaae
ENSSHAG00000007360	LRRC47	98	61.407	ENSBTAG00000004738	LRRC47	98	60.757	Bos_taurus
ENSSHAG00000007360	LRRC47	95	61.837	ENSCAFG00000019492	LRRC47	97	61.407	Canis_familiaris
ENSSHAG00000007360	LRRC47	99	62.010	ENSCAFG00020009667	LRRC47	99	61.578	Canis_lupus_dingo
ENSSHAG00000007360	LRRC47	99	61.720	ENSCHIG00000022607	LRRC47	98	61.446	Capra_hircus
ENSSHAG00000007360	LRRC47	95	61.661	ENSTSYG00000009326	LRRC47	98	62.069	Carlito_syrichta
ENSSHAG00000007360	LRRC47	64	71.958	ENSCAPG00000016517	LRRC47	100	69.761	Cavia_aperea
ENSSHAG00000007360	LRRC47	99	60.406	ENSCPOG00000014931	LRRC47	95	58.935	Cavia_porcellus
ENSSHAG00000007360	LRRC47	100	61.785	ENSCCAG00000024895	LRRC47	98	62.093	Cebus_capucinus
ENSSHAG00000007360	LRRC47	100	62.290	ENSCATG00000029337	LRRC47	98	62.436	Cercocebus_atys
ENSSHAG00000007360	LRRC47	99	60.951	ENSCLAG00000006093	LRRC47	98	59.138	Chinchilla_lanigera
ENSSHAG00000007360	LRRC47	100	62.290	ENSCSAG00000000727	LRRC47	98	62.436	Chlorocebus_sabaeus
ENSSHAG00000007360	LRRC47	99	56.312	ENSCPBG00000019404	LRRC47	98	56.303	Chrysemys_picta_bellii
ENSSHAG00000007360	LRRC47	75	66.890	ENSCANG00000030701	LRRC47	93	66.890	Colobus_angolensis_palliatus
ENSSHAG00000007360	LRRC47	98	59.145	ENSCGRG00001015159	Lrrc47	89	58.834	Cricetulus_griseus_chok1gshd
ENSSHAG00000007360	LRRC47	64	69.657	ENSCGRG00000017336	Lrrc47	100	69.312	Cricetulus_griseus_crigri
ENSSHAG00000007360	LRRC47	98	47.652	ENSCSEG00000006217	lrrc47	95	48.342	Cynoglossus_semilaevis
ENSSHAG00000007360	LRRC47	64	74.005	ENSDORG00000016594	Lrrc47	99	74.801	Dipodomys_ordii
ENSSHAG00000007360	LRRC47	99	61.591	ENSEASG00005021788	LRRC47	98	61.750	Equus_asinus_asinus
ENSSHAG00000007360	LRRC47	98	61.538	ENSECAG00000022472	LRRC47	89	61.407	Equus_caballus
ENSSHAG00000007360	LRRC47	99	47.279	ENSELUG00000017544	lrrc47	97	47.341	Esox_lucius
ENSSHAG00000007360	LRRC47	96	57.923	ENSFCAG00000011632	LRRC47	98	57.092	Felis_catus
ENSSHAG00000007360	LRRC47	68	67.742	ENSFALG00000009631	LRRC47	92	67.160	Ficedula_albicollis
ENSSHAG00000007360	LRRC47	97	49.385	ENSGMOG00000015674	lrrc47	99	48.007	Gadus_morhua
ENSSHAG00000007360	LRRC47	98	52.586	ENSGALG00000050995	LRRC47	99	51.884	Gallus_gallus
ENSSHAG00000007360	LRRC47	98	48.611	ENSGACG00000005550	lrrc47	98	48.780	Gasterosteus_aculeatus
ENSSHAG00000007360	LRRC47	100	56.579	ENSGAGG00000022584	LRRC47	98	57.023	Gopherus_agassizii
ENSSHAG00000007360	LRRC47	100	62.290	ENSGGOG00000015571	LRRC47	98	62.607	Gorilla_gorilla
ENSSHAG00000007360	LRRC47	100	59.933	ENSHGLG00000018278	LRRC47	95	58.591	Heterocephalus_glaber_female
ENSSHAG00000007360	LRRC47	68	67.901	ENSHGLG00100008507	LRRC47	100	65.842	Heterocephalus_glaber_male
ENSSHAG00000007360	LRRC47	98	48.527	ENSHCOG00000006348	lrrc47	96	48.517	Hippocampus_comes
ENSSHAG00000007360	LRRC47	99	62.017	ENSSTOG00000027559	LRRC47	98	60.922	Ictidomys_tridecemlineatus
ENSSHAG00000007360	LRRC47	98	61.986	ENSJJAG00000017474	Lrrc47	95	60.069	Jaculus_jaculus
ENSSHAG00000007360	LRRC47	98	47.849	ENSKMAG00000003414	lrrc47	99	47.578	Kryptolebias_marmoratus
ENSSHAG00000007360	LRRC47	100	64.202	ENSLAFG00000011657	LRRC47	98	64.897	Loxodonta_africana
ENSSHAG00000007360	LRRC47	100	44.444	ENSMFAG00000045730	LRRC47	87	69.456	Macaca_fascicularis
ENSSHAG00000007360	LRRC47	98	62.222	ENSMNEG00000042488	LRRC47	98	62.264	Macaca_nemestrina
ENSSHAG00000007360	LRRC47	75	66.667	ENSMLEG00000043735	LRRC47	92	66.009	Mandrillus_leucophaeus
ENSSHAG00000007360	LRRC47	99	60.374	ENSMAUG00000021337	Lrrc47	97	59.247	Mesocricetus_auratus
ENSSHAG00000007360	LRRC47	100	61.551	ENSMICG00000026816	LRRC47	98	61.512	Microcebus_murinus
ENSSHAG00000007360	LRRC47	100	60.237	ENSMOCG00000021279	Lrrc47	98	60.345	Microtus_ochrogaster
ENSSHAG00000007360	LRRC47	98	49.827	ENSMMOG00000017007	lrrc47	99	50.865	Mola_mola
ENSSHAG00000007360	LRRC47	99	70.275	ENSMODG00000006554	LRRC47	98	69.338	Monodelphis_domestica
ENSSHAG00000007360	LRRC47	98	60.342	MGP_CAROLIEiJ_G0026864	Lrrc47	98	60.206	Mus_caroli
ENSSHAG00000007360	LRRC47	98	60.342	ENSMUSG00000029028	Lrrc47	98	60.103	Mus_musculus
ENSSHAG00000007360	LRRC47	98	59.556	MGP_PahariEiJ_G0029212	Lrrc47	98	59.760	Mus_pahari
ENSSHAG00000007360	LRRC47	98	60.068	MGP_SPRETEiJ_G0027857	Lrrc47	98	59.932	Mus_spretus
ENSSHAG00000007360	LRRC47	65	71.316	ENSMPUG00000007321	LRRC47	75	70.976	Mustela_putorius_furo
ENSSHAG00000007360	LRRC47	98	58.793	ENSNGAG00000022153	Lrrc47	98	59.138	Nannospalax_galili
ENSSHAG00000007360	LRRC47	100	62.203	ENSNLEG00000008131	LRRC47	98	62.176	Nomascus_leucogenys
ENSSHAG00000007360	LRRC47	83	61.789	ENSODEG00000010882	LRRC47	92	59.305	Octodon_degus
ENSSHAG00000007360	LRRC47	95	48.571	ENSORLG00000002532	lrrc47	99	48.837	Oryzias_latipes
ENSSHAG00000007360	LRRC47	98	49.135	ENSORLG00020019601	lrrc47	99	49.393	Oryzias_latipes_hni
ENSSHAG00000007360	LRRC47	98	48.789	ENSORLG00015014040	lrrc47	99	49.220	Oryzias_latipes_hsok
ENSSHAG00000007360	LRRC47	98	49.828	ENSOMEG00000008989	lrrc47	99	49.393	Oryzias_melastigma
ENSSHAG00000007360	LRRC47	99	61.083	ENSOGAG00000001553	LRRC47	98	61.235	Otolemur_garnettii
ENSSHAG00000007360	LRRC47	98	61.186	ENSOARG00000015290	LRRC47	98	61.063	Ovis_aries
ENSSHAG00000007360	LRRC47	72	69.393	ENSPPAG00000036370	-	98	75.862	Pan_paniscus
ENSSHAG00000007360	LRRC47	99	59.044	ENSPPRG00000005261	LRRC47	98	58.419	Panthera_pardus
ENSSHAG00000007360	LRRC47	100	62.121	ENSPTRG00000000068	LRRC47	98	62.436	Pan_troglodytes
ENSSHAG00000007360	LRRC47	100	62.121	ENSPANG00000012437	LRRC47	98	62.264	Papio_anubis
ENSSHAG00000007360	LRRC47	64	76.984	ENSPSIG00000004196	LRRC47	99	76.720	Pelodiscus_sinensis
ENSSHAG00000007360	LRRC47	64	70.263	ENSPEMG00000021068	Lrrc47	100	69.737	Peromyscus_maniculatus_bairdii
ENSSHAG00000007360	LRRC47	98	75.563	ENSPCIG00000003638	LRRC47	98	75.784	Phascolarctos_cinereus
ENSSHAG00000007360	LRRC47	93	50.091	ENSPFOG00000000992	lrrc47	93	49.358	Poecilia_formosa
ENSSHAG00000007360	LRRC47	98	50.433	ENSPLAG00000008077	lrrc47	99	49.739	Poecilia_latipinna
ENSSHAG00000007360	LRRC47	98	50.690	ENSPMEG00000007367	lrrc47	99	50.261	Poecilia_mexicana
ENSSHAG00000007360	LRRC47	100	61.953	ENSPPYG00000001960	LRRC47	98	62.264	Pongo_abelii
ENSSHAG00000007360	LRRC47	98	62.158	ENSPCOG00000019161	LRRC47	98	62.199	Propithecus_coquereli
ENSSHAG00000007360	LRRC47	100	59.696	ENSPVAG00000009839	LRRC47	98	59.278	Pteropus_vampyrus
ENSSHAG00000007360	LRRC47	99	50.767	ENSPNAG00000017982	lrrc47	98	51.123	Pygocentrus_nattereri
ENSSHAG00000007360	LRRC47	100	58.655	ENSRNOG00000024796	Lrrc47	98	59.863	Rattus_norvegicus
ENSSHAG00000007360	LRRC47	100	62.795	ENSRBIG00000019437	LRRC47	98	62.950	Rhinopithecus_bieti
ENSSHAG00000007360	LRRC47	100	62.795	ENSRROG00000043182	LRRC47	98	62.950	Rhinopithecus_roxellana
ENSSHAG00000007360	LRRC47	75	67.793	ENSSBOG00000026334	LRRC47	90	67.793	Saimiri_boliviensis_boliviensis
ENSSHAG00000007360	LRRC47	98	51.207	ENSSMAG00000009344	lrrc47	99	50.519	Scophthalmus_maximus
ENSSHAG00000007360	LRRC47	98	49.483	ENSSDUG00000014618	lrrc47	99	50.865	Seriola_dumerili
ENSSHAG00000007360	LRRC47	98	50.345	ENSSLDG00000018908	lrrc47	99	48.671	Seriola_lalandi_dorsalis
ENSSHAG00000007360	LRRC47	98	54.412	ENSSPUG00000010277	LRRC47	98	57.070	Sphenodon_punctatus
ENSSHAG00000007360	LRRC47	98	50.000	ENSSPAG00000005188	lrrc47	99	49.654	Stegastes_partitus
ENSSHAG00000007360	LRRC47	99	61.083	ENSSSCG00000039516	LRRC47	98	60.997	Sus_scrofa
ENSSHAG00000007360	LRRC47	69	65.185	ENSTGUG00000002737	LRRC47	100	64.634	Taeniopygia_guttata
ENSSHAG00000007360	LRRC47	98	49.565	ENSTRUG00000017696	lrrc47	99	48.866	Takifugu_rubripes
ENSSHAG00000007360	LRRC47	99	48.616	ENSTNIG00000010923	lrrc47	98	48.342	Tetraodon_nigroviridis
ENSSHAG00000007360	LRRC47	100	59.259	ENSTTRG00000011751	LRRC47	98	59.348	Tursiops_truncatus
ENSSHAG00000007360	LRRC47	87	61.628	ENSUAMG00000012080	LRRC47	96	61.240	Ursus_americanus
ENSSHAG00000007360	LRRC47	65	73.684	ENSUMAG00000010781	LRRC47	81	72.632	Ursus_maritimus
ENSSHAG00000007360	LRRC47	99	58.277	ENSVVUG00000027118	LRRC47	94	60.823	Vulpes_vulpes
ENSSHAG00000007360	LRRC47	99	53.311	ENSXETG00000006029	lrrc47	98	53.276	Xenopus_tropicalis
ENSSHAG00000007360	LRRC47	99	50.344	ENSXCOG00000002813	lrrc47	98	50.435	Xiphophorus_couchianus
ENSSHAG00000007360	LRRC47	98	50.777	ENSXMAG00000019386	lrrc47	99	49.391	Xiphophorus_maculatus