EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000007423 (Gene tree)
Gene ID: 100915929
Gene Symbol: ERCC3
Alias: BTF2|GTF2H|RAD25|TFIIH|XPB
Full Name: ERCC excision repair 3%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 41244 bases
Position: chrGL849598.1:315240-356483
Accession: 100915929
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000008570	ResIII	PF04851.15	9.7e-16	1	1
ENSSHAP00000008569	ResIII	PF04851.15	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000008640	ERCC3-201	3594	-	ENSSHAP00000008569	783 (aa)	-	G3VZG4
ENSSHAT00000008641	ERCC3-202	3594	-	ENSSHAP00000008570	783 (aa)	XP_003763813	G3VZG5

Gene Model

Click here to download ENSSHAG00000007423's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03022	Basal transcription factors	KEGG
shr03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000007423's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000007423	ERCC3	100	94.253	ENSG00000163161	ERCC3	99	100.000	Homo_sapiens
ENSSHAG00000007423	ERCC3	100	87.913	ENSAPOG00000014383	ercc3	96	89.550	Acanthochromis_polyacanthus
ENSSHAG00000007423	ERCC3	100	94.125	ENSAMEG00000016840	ERCC3	98	94.517	Ailuropoda_melanoleuca
ENSSHAG00000007423	ERCC3	99	87.516	ENSACIG00000000126	ercc3	98	87.979	Amphilophus_citrinellus
ENSSHAG00000007423	ERCC3	100	87.405	ENSAOCG00000009396	ercc3	96	89.418	Amphiprion_ocellaris
ENSSHAG00000007423	ERCC3	100	87.405	ENSAPEG00000023077	ercc3	96	89.418	Amphiprion_percula
ENSSHAG00000007423	ERCC3	100	87.913	ENSATEG00000014860	ercc3	96	89.153	Anabas_testudineus
ENSSHAG00000007423	ERCC3	90	93.927	ENSAPLG00000012068	ERCC3	98	93.927	Anas_platyrhynchos
ENSSHAG00000007423	ERCC3	92	94.298	ENSACAG00000009919	ERCC3	100	94.298	Anolis_carolinensis
ENSSHAG00000007423	ERCC3	100	94.381	ENSANAG00000031091	ERCC3	98	94.778	Aotus_nancymaae
ENSSHAG00000007423	ERCC3	100	87.659	ENSACLG00000022508	ercc3	97	88.259	Astatotilapia_calliptera
ENSSHAG00000007423	ERCC3	100	87.755	ENSAMXG00000036947	ercc3	97	89.153	Astyanax_mexicanus
ENSSHAG00000007423	ERCC3	100	94.253	ENSBTAG00000020777	ERCC3	98	94.648	Bos_taurus
ENSSHAG00000007423	ERCC3	98	62.703	WBGene00013441	xpb-1	97	63.928	Caenorhabditis_elegans
ENSSHAG00000007423	ERCC3	100	94.253	ENSCJAG00000010416	ERCC3	98	94.648	Callithrix_jacchus
ENSSHAG00000007423	ERCC3	98	94.909	ENSCAFG00000004497	ERCC3	98	94.909	Canis_familiaris
ENSSHAG00000007423	ERCC3	98	94.909	ENSCAFG00020003495	ERCC3	98	94.909	Canis_lupus_dingo
ENSSHAG00000007423	ERCC3	100	94.636	ENSCHIG00000014551	ERCC3	98	95.039	Capra_hircus
ENSSHAG00000007423	ERCC3	99	93.928	ENSTSYG00000004137	ERCC3	97	94.834	Carlito_syrichta
ENSSHAG00000007423	ERCC3	89	79.971	ENSCAPG00000017027	ERCC3	100	79.971	Cavia_aperea
ENSSHAG00000007423	ERCC3	100	94.381	ENSCPOG00000002144	ERCC3	98	94.648	Cavia_porcellus
ENSSHAG00000007423	ERCC3	100	94.381	ENSCCAG00000024421	ERCC3	98	94.778	Cebus_capucinus
ENSSHAG00000007423	ERCC3	100	94.508	ENSCATG00000032313	ERCC3	98	94.909	Cercocebus_atys
ENSSHAG00000007423	ERCC3	100	94.508	ENSCLAG00000002965	ERCC3	94	94.778	Chinchilla_lanigera
ENSSHAG00000007423	ERCC3	100	94.508	ENSCSAG00000016827	ERCC3	98	94.909	Chlorocebus_sabaeus
ENSSHAG00000007423	ERCC3	83	97.076	ENSCHOG00000007414	ERCC3	80	97.076	Choloepus_hoffmanni
ENSSHAG00000007423	ERCC3	92	94.854	ENSCPBG00000013638	ERCC3	100	94.854	Chrysemys_picta_bellii
ENSSHAG00000007423	ERCC3	96	71.634	ENSCING00000002867	ercc3	96	71.634	Ciona_intestinalis
ENSSHAG00000007423	ERCC3	100	94.636	ENSCANG00000007094	ERCC3	98	95.039	Colobus_angolensis_palliatus
ENSSHAG00000007423	ERCC3	100	95.019	ENSCGRG00001009426	Ercc3	96	95.889	Cricetulus_griseus_chok1gshd
ENSSHAG00000007423	ERCC3	97	94.342	ENSCGRG00000015547	Ercc3	96	95.212	Cricetulus_griseus_crigri
ENSSHAG00000007423	ERCC3	100	86.658	ENSCSEG00000016479	ercc3	96	87.715	Cynoglossus_semilaevis
ENSSHAG00000007423	ERCC3	96	89.550	ENSCVAG00000015177	ercc3	96	89.550	Cyprinodon_variegatus
ENSSHAG00000007423	ERCC3	96	89.669	ENSDARG00000002402	ercc3	96	89.669	Danio_rerio
ENSSHAG00000007423	ERCC3	56	97.506	ENSDNOG00000035027	ERCC3	95	97.506	Dasypus_novemcinctus
ENSSHAG00000007423	ERCC3	100	95.147	ENSDORG00000004671	Ercc3	100	95.147	Dipodomys_ordii
ENSSHAG00000007423	ERCC3	99	68.672	FBgn0001179	hay	94	70.604	Drosophila_melanogaster
ENSSHAG00000007423	ERCC3	90	95.048	ENSETEG00000019887	ERCC3	86	95.048	Echinops_telfairi
ENSSHAG00000007423	ERCC3	100	80.076	ENSEBUG00000009773	ercc3	95	81.854	Eptatretus_burgeri
ENSSHAG00000007423	ERCC3	100	92.154	ENSEASG00005022466	ERCC3	93	95.733	Equus_asinus_asinus
ENSSHAG00000007423	ERCC3	100	94.508	ENSECAG00000006589	ERCC3	98	94.909	Equus_caballus
ENSSHAG00000007423	ERCC3	93	93.042	ENSEEUG00000001057	ERCC3	98	93.706	Erinaceus_europaeus
ENSSHAG00000007423	ERCC3	100	86.387	ENSELUG00000000089	ercc3	96	87.335	Esox_lucius
ENSSHAG00000007423	ERCC3	100	94.125	ENSFCAG00000006989	ERCC3	98	94.386	Felis_catus
ENSSHAG00000007423	ERCC3	99	92.129	ENSFALG00000003936	ERCC3	98	92.177	Ficedula_albicollis
ENSSHAG00000007423	ERCC3	100	94.381	ENSFDAG00000011924	ERCC3	98	94.648	Fukomys_damarensis
ENSSHAG00000007423	ERCC3	100	87.659	ENSFHEG00000005185	ercc3	97	88.259	Fundulus_heteroclitus
ENSSHAG00000007423	ERCC3	100	84.949	ENSGMOG00000018032	ercc3	96	85.676	Gadus_morhua
ENSSHAG00000007423	ERCC3	98	93.081	ENSGALG00000011515	ERCC3	98	93.081	Gallus_gallus
ENSSHAG00000007423	ERCC3	100	88.168	ENSGAFG00000011936	ercc3	96	89.021	Gambusia_affinis
ENSSHAG00000007423	ERCC3	100	86.768	ENSGACG00000015218	ercc3	99	87.500	Gasterosteus_aculeatus
ENSSHAG00000007423	ERCC3	92	94.993	ENSGAGG00000018579	ERCC3	100	94.993	Gopherus_agassizii
ENSSHAG00000007423	ERCC3	100	94.381	ENSGGOG00000015255	ERCC3	98	94.778	Gorilla_gorilla
ENSSHAG00000007423	ERCC3	100	87.659	ENSHBUG00000003818	ercc3	97	88.259	Haplochromis_burtoni
ENSSHAG00000007423	ERCC3	100	94.636	ENSHGLG00000011014	ERCC3	98	94.909	Heterocephalus_glaber_female
ENSSHAG00000007423	ERCC3	100	94.636	ENSHGLG00100013806	ERCC3	98	94.909	Heterocephalus_glaber_male
ENSSHAG00000007423	ERCC3	100	87.261	ENSHCOG00000016924	ercc3	96	87.931	Hippocampus_comes
ENSSHAG00000007423	ERCC3	100	87.516	ENSIPUG00000021000	ercc3	98	88.672	Ictalurus_punctatus
ENSSHAG00000007423	ERCC3	100	94.764	ENSSTOG00000011001	ERCC3	98	95.039	Ictidomys_tridecemlineatus
ENSSHAG00000007423	ERCC3	90	93.909	ENSJJAG00000001117	Ercc3	100	93.909	Jaculus_jaculus
ENSSHAG00000007423	ERCC3	100	88.041	ENSKMAG00000021764	ercc3	97	88.918	Kryptolebias_marmoratus
ENSSHAG00000007423	ERCC3	100	87.261	ENSLBEG00000000468	ercc3	96	88.212	Labrus_bergylta
ENSSHAG00000007423	ERCC3	100	87.044	ENSLACG00000014815	ERCC3	96	87.598	Latimeria_chalumnae
ENSSHAG00000007423	ERCC3	89	84.681	ENSLOCG00000010907	ercc3	87	84.681	Lepisosteus_oculatus
ENSSHAG00000007423	ERCC3	100	94.636	ENSLAFG00000014866	ERCC3	98	94.909	Loxodonta_africana
ENSSHAG00000007423	ERCC3	100	94.508	ENSMFAG00000003370	ERCC3	98	94.909	Macaca_fascicularis
ENSSHAG00000007423	ERCC3	100	90.542	ENSMNEG00000004215	ERCC3	98	90.851	Macaca_nemestrina
ENSSHAG00000007423	ERCC3	100	94.508	ENSMLEG00000042061	ERCC3	98	94.909	Mandrillus_leucophaeus
ENSSHAG00000007423	ERCC3	100	87.261	ENSMAMG00000004505	ercc3	96	88.477	Mastacembelus_armatus
ENSSHAG00000007423	ERCC3	100	87.659	ENSMZEG00005004854	ercc3	97	88.259	Maylandia_zebra
ENSSHAG00000007423	ERCC3	90	94.043	ENSMGAG00000011706	ERCC3	100	94.043	Meleagris_gallopavo
ENSSHAG00000007423	ERCC3	100	94.005	ENSMAUG00000004515	Ercc3	96	95.099	Mesocricetus_auratus
ENSSHAG00000007423	ERCC3	100	94.764	ENSMICG00000009578	ERCC3	98	95.039	Microcebus_murinus
ENSSHAG00000007423	ERCC3	100	94.125	ENSMOCG00000021767	Ercc3	96	94.960	Microtus_ochrogaster
ENSSHAG00000007423	ERCC3	99	86.434	ENSMMOG00000018174	ercc3	97	87.186	Mola_mola
ENSSHAG00000007423	ERCC3	100	98.851	ENSMODG00000018695	ERCC3	100	98.851	Monodelphis_domestica
ENSSHAG00000007423	ERCC3	100	86.387	ENSMALG00000014944	ercc3	97	88.360	Monopterus_albus
ENSSHAG00000007423	ERCC3	100	94.381	MGP_CAROLIEiJ_G0022075	Ercc3	96	95.225	Mus_caroli
ENSSHAG00000007423	ERCC3	100	93.878	ENSMUSG00000024382	Ercc3	96	94.702	Mus_musculus
ENSSHAG00000007423	ERCC3	100	94.381	MGP_PahariEiJ_G0018809	Ercc3	96	95.099	Mus_pahari
ENSSHAG00000007423	ERCC3	100	94.133	MGP_SPRETEiJ_G0022987	Ercc3	96	94.967	Mus_spretus
ENSSHAG00000007423	ERCC3	100	94.381	ENSMPUG00000012021	ERCC3	98	94.648	Mustela_putorius_furo
ENSSHAG00000007423	ERCC3	92	89.931	ENSMLUG00000007429	ERCC3	99	89.931	Myotis_lucifugus
ENSSHAG00000007423	ERCC3	97	92.932	ENSNGAG00000019598	Ercc3	96	96.062	Nannospalax_galili
ENSSHAG00000007423	ERCC3	100	87.659	ENSNBRG00000019074	ercc3	97	88.259	Neolamprologus_brichardi
ENSSHAG00000007423	ERCC3	92	92.887	ENSNLEG00000015665	ERCC3	97	92.887	Nomascus_leucogenys
ENSSHAG00000007423	ERCC3	100	91.699	ENSOPRG00000004553	ERCC3	98	91.906	Ochotona_princeps
ENSSHAG00000007423	ERCC3	100	95.147	ENSODEG00000005795	ERCC3	98	95.431	Octodon_degus
ENSSHAG00000007423	ERCC3	100	87.659	ENSONIG00000003255	ercc3	97	88.391	Oreochromis_niloticus
ENSSHAG00000007423	ERCC3	100	94.891	ENSOCUG00000002248	ERCC3	100	94.891	Oryctolagus_cuniculus
ENSSHAG00000007423	ERCC3	100	87.150	ENSORLG00000004393	ercc3	96	88.360	Oryzias_latipes
ENSSHAG00000007423	ERCC3	100	87.023	ENSORLG00020017718	ercc3	95	89.407	Oryzias_latipes_hni
ENSSHAG00000007423	ERCC3	100	86.896	ENSORLG00015015695	ercc3	96	88.228	Oryzias_latipes_hsok
ENSSHAG00000007423	ERCC3	100	87.532	ENSOMEG00000015374	ercc3	96	88.889	Oryzias_melastigma
ENSSHAG00000007423	ERCC3	100	94.650	ENSOGAG00000009103	ERCC3	98	94.922	Otolemur_garnettii
ENSSHAG00000007423	ERCC3	100	94.508	ENSOARG00000016147	ERCC3	98	95.039	Ovis_aries
ENSSHAG00000007423	ERCC3	100	94.381	ENSPPAG00000036166	ERCC3	98	94.778	Pan_paniscus
ENSSHAG00000007423	ERCC3	100	94.253	ENSPPRG00000001305	ERCC3	98	94.517	Panthera_pardus
ENSSHAG00000007423	ERCC3	92	95.410	ENSPTIG00000016969	ERCC3	100	95.410	Panthera_tigris_altaica
ENSSHAG00000007423	ERCC3	100	94.381	ENSPTRG00000046940	ERCC3	98	94.778	Pan_troglodytes
ENSSHAG00000007423	ERCC3	100	94.508	ENSPANG00000007699	ERCC3	98	94.909	Papio_anubis
ENSSHAG00000007423	ERCC3	100	87.898	ENSPKIG00000001319	ercc3	99	89.272	Paramormyrops_kingsleyae
ENSSHAG00000007423	ERCC3	92	94.854	ENSPSIG00000014682	ERCC3	100	94.854	Pelodiscus_sinensis
ENSSHAG00000007423	ERCC3	96	89.523	ENSPMGG00000017885	ercc3	96	89.523	Periophthalmus_magnuspinnatus
ENSSHAG00000007423	ERCC3	100	94.508	ENSPEMG00000013733	Ercc3	96	95.358	Peromyscus_maniculatus_bairdii
ENSSHAG00000007423	ERCC3	90	79.441	ENSPMAG00000005081	ercc3	99	79.441	Petromyzon_marinus
ENSSHAG00000007423	ERCC3	100	99.106	ENSPCIG00000011821	ERCC3	100	99.106	Phascolarctos_cinereus
ENSSHAG00000007423	ERCC3	96	89.286	ENSPFOG00000015604	ercc3	97	89.286	Poecilia_formosa
ENSSHAG00000007423	ERCC3	96	86.544	ENSPLAG00000022245	ercc3	100	89.058	Poecilia_latipinna
ENSSHAG00000007423	ERCC3	96	89.286	ENSPMEG00000016987	ercc3	97	89.286	Poecilia_mexicana
ENSSHAG00000007423	ERCC3	100	88.041	ENSPREG00000020921	ercc3	96	89.021	Poecilia_reticulata
ENSSHAG00000007423	ERCC3	100	93.622	ENSPPYG00000012769	ERCC3	98	94.003	Pongo_abelii
ENSSHAG00000007423	ERCC3	100	95.019	ENSPCOG00000024903	ERCC3	98	95.431	Propithecus_coquereli
ENSSHAG00000007423	ERCC3	90	94.553	ENSPVAG00000013774	ERCC3	88	94.553	Pteropus_vampyrus
ENSSHAG00000007423	ERCC3	100	87.659	ENSPNYG00000001208	ercc3	97	88.259	Pundamilia_nyererei
ENSSHAG00000007423	ERCC3	100	87.771	ENSPNAG00000005748	ercc3	97	88.904	Pygocentrus_nattereri
ENSSHAG00000007423	ERCC3	100	94.508	ENSRNOG00000013180	Ercc3	96	95.232	Rattus_norvegicus
ENSSHAG00000007423	ERCC3	100	94.508	ENSRBIG00000027692	ERCC3	98	94.909	Rhinopithecus_bieti
ENSSHAG00000007423	ERCC3	100	94.770	ENSRROG00000040673	ERCC3	98	95.176	Rhinopithecus_roxellana
ENSSHAG00000007423	ERCC3	91	56.712	YIL143C	SSL2	85	56.617	Saccharomyces_cerevisiae
ENSSHAG00000007423	ERCC3	100	94.253	ENSSBOG00000023079	ERCC3	98	94.648	Saimiri_boliviensis_boliviensis
ENSSHAG00000007423	ERCC3	96	88.742	ENSSFOG00015012753	ercc3	96	88.742	Scleropages_formosus
ENSSHAG00000007423	ERCC3	100	86.785	ENSSMAG00000011915	ercc3	96	88.095	Scophthalmus_maximus
ENSSHAG00000007423	ERCC3	100	87.150	ENSSDUG00000021181	ercc3	96	88.757	Seriola_dumerili
ENSSHAG00000007423	ERCC3	100	87.405	ENSSLDG00000008744	ercc3	94	88.889	Seriola_lalandi_dorsalis
ENSSHAG00000007423	ERCC3	55	85.681	ENSSARG00000000751	-	85	85.681	Sorex_araneus
ENSSHAG00000007423	ERCC3	90	93.475	ENSSPUG00000015183	ERCC3	91	93.475	Sphenodon_punctatus
ENSSHAG00000007423	ERCC3	100	87.786	ENSSPAG00000004748	ercc3	96	89.286	Stegastes_partitus
ENSSHAG00000007423	ERCC3	100	94.764	ENSSSCG00000015721	ERCC3	100	95.847	Sus_scrofa
ENSSHAG00000007423	ERCC3	99	93.798	ENSTGUG00000004920	-	99	93.734	Taeniopygia_guttata
ENSSHAG00000007423	ERCC3	100	86.752	ENSTRUG00000017185	ercc3	97	88.079	Takifugu_rubripes
ENSSHAG00000007423	ERCC3	97	84.706	ENSTNIG00000005457	ercc3	99	86.490	Tetraodon_nigroviridis
ENSSHAG00000007423	ERCC3	80	95.048	ENSTBEG00000009381	ERCC3	81	95.048	Tupaia_belangeri
ENSSHAG00000007423	ERCC3	68	98.110	ENSUAMG00000009589	-	100	98.110	Ursus_americanus
ENSSHAG00000007423	ERCC3	100	94.253	ENSUMAG00000008361	ERCC3	98	94.648	Ursus_maritimus
ENSSHAG00000007423	ERCC3	92	95.688	ENSVVUG00000010431	ERCC3	100	95.688	Vulpes_vulpes
ENSSHAG00000007423	ERCC3	100	91.476	ENSXETG00000033646	ercc3	98	91.927	Xenopus_tropicalis
ENSSHAG00000007423	ERCC3	99	88.402	ENSXCOG00000001791	ercc3	97	89.153	Xiphophorus_couchianus
ENSSHAG00000007423	ERCC3	100	88.295	ENSXMAG00000003641	ercc3	96	89.286	Xiphophorus_maculatus