EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000007489 (Gene tree)
Gene ID: 100926928
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 5515 bases
Position: chrGL857019.1:321788-327302
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000008644	RRM_1	PF00076.22	9.2e-32	1	2
ENSSHAP00000008644	RRM_1	PF00076.22	9.2e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000008716	-	1699	-	ENSSHAP00000008644	521 (aa)	-	G3VZN9

Gene Model

Click here to download ENSSHAG00000007489's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000007489's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000007489	-	50	86.873	ENSSHAG00000002702	-	62	86.873

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000007489	-	51	36.491	ENSAPOG00000014534	-	70	36.803	Acanthochromis_polyacanthus
ENSSHAG00000007489	-	51	36.071	ENSAPEG00000013612	-	65	36.431	Amphiprion_percula
ENSSHAG00000007489	-	57	33.866	ENSATEG00000019862	-	83	35.955	Anabas_testudineus
ENSSHAG00000007489	-	50	62.879	ENSAPLG00000012897	-	66	63.258	Anas_platyrhynchos
ENSSHAG00000007489	-	92	54.635	ENSACAG00000001006	-	57	60.839	Anolis_carolinensis
ENSSHAG00000007489	-	51	49.265	ENSAMXG00000001647	ncl	84	52.486	Astyanax_mexicanus
ENSSHAG00000007489	-	61	62.044	ENSCHIG00000003401	-	69	53.175	Capra_hircus
ENSSHAG00000007489	-	100	53.223	ENSCPBG00000016444	-	59	64.773	Chrysemys_picta_bellii
ENSSHAG00000007489	-	63	50.453	ENSDNOG00000040257	-	57	58.436	Dasypus_novemcinctus
ENSSHAG00000007489	-	53	41.197	ENSELUG00000022826	-	83	42.105	Esox_lucius
ENSSHAG00000007489	-	50	58.712	ENSFALG00000007592	-	58	58.333	Ficedula_albicollis
ENSSHAG00000007489	-	50	61.364	ENSGALG00000032930	NCL	58	61.364	Gallus_gallus
ENSSHAG00000007489	-	100	53.442	ENSGAGG00000013330	-	58	63.636	Gopherus_agassizii
ENSSHAG00000007489	-	66	52.140	ENSLBEG00000019073	ncl	57	52.140	Labrus_bergylta
ENSSHAG00000007489	-	52	44.681	ENSLACG00000022167	-	86	45.833	Latimeria_chalumnae
ENSSHAG00000007489	-	55	33.077	ENSMAMG00000003479	-	72	32.800	Mastacembelus_armatus
ENSSHAG00000007489	-	100	84.130	ENSMODG00000002470	-	94	80.712	Monodelphis_domestica
ENSSHAG00000007489	-	99	71.111	ENSMEUG00000012335	-	58	91.506	Notamacropus_eugenii
ENSSHAG00000007489	-	90	57.588	ENSOANG00000008732	-	64	75.862	Ornithorhynchus_anatinus
ENSSHAG00000007489	-	56	44.551	ENSORLG00015013815	ncl	89	53.125	Oryzias_latipes_hsok
ENSSHAG00000007489	-	99	54.927	ENSPSIG00000002361	-	56	65.267	Pelodiscus_sinensis
ENSSHAG00000007489	-	65	48.555	ENSPMGG00000004709	ncl	83	55.026	Periophthalmus_magnuspinnatus
ENSSHAG00000007489	-	100	84.091	ENSPCIG00000003293	-	57	94.208	Phascolarctos_cinereus
ENSSHAG00000007489	-	50	50.758	ENSPFOG00000024205	ncl	53	51.698	Poecilia_formosa
ENSSHAG00000007489	-	50	49.621	ENSPLAG00000024026	ncl	53	50.566	Poecilia_latipinna
ENSSHAG00000007489	-	50	50.758	ENSPMEG00000006000	ncl	53	51.698	Poecilia_mexicana
ENSSHAG00000007489	-	65	50.584	ENSPNYG00000020494	ncl	55	50.973	Pundamilia_nyererei
ENSSHAG00000007489	-	65	32.213	ENSSMAG00000007582	-	69	35.531	Scophthalmus_maximus
ENSSHAG00000007489	-	50	51.504	ENSSDUG00000006128	ncl	88	50.965	Seriola_dumerili
ENSSHAG00000007489	-	51	35.106	ENSSLDG00000015784	-	68	35.472	Seriola_lalandi_dorsalis
ENSSHAG00000007489	-	69	73.276	ENSSARG00000010007	-	64	72.650	Sorex_araneus
ENSSHAG00000007489	-	77	57.820	ENSSPUG00000008244	-	59	63.910	Sphenodon_punctatus
ENSSHAG00000007489	-	63	50.150	ENSTRUG00000008185	ncl	57	52.510	Takifugu_rubripes
ENSSHAG00000007489	-	50	37.600	ENSXCOG00000003524	ncl	88	37.000	Xiphophorus_couchianus
ENSSHAG00000007489	-	50	51.894	ENSXMAG00000005914	ncl	53	51.698	Xiphophorus_maculatus