EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000007589 (Gene tree)
Gene ID: 100926303
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 37484 bases
Position: chrGL856752.1:333014-370497
Accession: 100926303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000008762	zf-CCCH	PF00642.24	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000008835	RC3H1-201	3549	XM_012547671	ENSSHAP00000008762	1134 (aa)	XP_003767489	G3W007

Gene Model

Click here to download ENSSHAG00000007589's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000007589's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000007589	RC3H1	97	52.663	ENSSHAG00000007498	RC3H2	93	52.397

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000007589	RC3H1	100	91.542	ENSG00000135870	RC3H1	100	91.454	Homo_sapiens
ENSSHAG00000007589	RC3H1	100	91.366	ENSAMEG00000015657	RC3H1	100	91.278	Ailuropoda_melanoleuca
ENSSHAG00000007589	RC3H1	100	86.672	ENSAPLG00000005341	RC3H1	100	86.585	Anas_platyrhynchos
ENSSHAG00000007589	RC3H1	100	83.537	ENSACAG00000015271	RC3H1	100	83.871	Anolis_carolinensis
ENSSHAG00000007589	RC3H1	100	91.189	ENSANAG00000036716	RC3H1	100	91.101	Aotus_nancymaae
ENSSHAG00000007589	RC3H1	100	90.396	ENSBTAG00000052708	RC3H1	100	90.308	Bos_taurus
ENSSHAG00000007589	RC3H1	100	91.013	ENSCJAG00000009106	RC3H1	100	90.925	Callithrix_jacchus
ENSSHAG00000007589	RC3H1	100	91.013	ENSCAFG00000014434	RC3H1	100	90.925	Canis_familiaris
ENSSHAG00000007589	RC3H1	100	90.933	ENSCAFG00020017112	RC3H1	99	97.753	Canis_lupus_dingo
ENSSHAG00000007589	RC3H1	100	90.396	ENSCHIG00000002873	RC3H1	100	90.308	Capra_hircus
ENSSHAG00000007589	RC3H1	99	90.396	ENSTSYG00000003913	RC3H1	99	90.308	Carlito_syrichta
ENSSHAG00000007589	RC3H1	100	87.236	ENSCPOG00000004349	RC3H1	100	87.324	Cavia_porcellus
ENSSHAG00000007589	RC3H1	100	89.604	ENSCCAG00000025652	RC3H1	100	89.515	Cebus_capucinus
ENSSHAG00000007589	RC3H1	100	91.454	ENSCATG00000033497	RC3H1	100	91.366	Cercocebus_atys
ENSSHAG00000007589	RC3H1	100	89.877	ENSCLAG00000011267	RC3H1	100	89.965	Chinchilla_lanigera
ENSSHAG00000007589	RC3H1	96	91.790	ENSCSAG00000011823	RC3H1	84	91.697	Chlorocebus_sabaeus
ENSSHAG00000007589	RC3H1	93	96.304	ENSCPBG00000014670	RC3H1	100	87.730	Chrysemys_picta_bellii
ENSSHAG00000007589	RC3H1	100	91.542	ENSCANG00000032120	RC3H1	100	91.454	Colobus_angolensis_palliatus
ENSSHAG00000007589	RC3H1	100	89.692	ENSCGRG00001020812	Rc3h1	100	89.604	Cricetulus_griseus_chok1gshd
ENSSHAG00000007589	RC3H1	100	89.692	ENSCGRG00000011952	Rc3h1	100	89.604	Cricetulus_griseus_crigri
ENSSHAG00000007589	RC3H1	55	87.781	ENSDNOG00000011494	RC3H1	99	87.781	Dasypus_novemcinctus
ENSSHAG00000007589	RC3H1	100	89.780	ENSDORG00000004855	Rc3h1	100	89.692	Dipodomys_ordii
ENSSHAG00000007589	RC3H1	81	91.727	ENSETEG00000012064	RC3H1	87	91.727	Echinops_telfairi
ENSSHAG00000007589	RC3H1	100	90.220	ENSEASG00005017000	RC3H1	100	90.132	Equus_asinus_asinus
ENSSHAG00000007589	RC3H1	100	90.044	ENSECAG00000021208	RC3H1	100	89.956	Equus_caballus
ENSSHAG00000007589	RC3H1	83	94.538	ENSEEUG00000014861	RC3H1	93	82.189	Erinaceus_europaeus
ENSSHAG00000007589	RC3H1	100	91.366	ENSFCAG00000014924	RC3H1	100	91.278	Felis_catus
ENSSHAG00000007589	RC3H1	100	85.428	ENSFALG00000002947	RC3H1	100	85.153	Ficedula_albicollis
ENSSHAG00000007589	RC3H1	100	89.965	ENSFDAG00000013303	RC3H1	100	89.877	Fukomys_damarensis
ENSSHAG00000007589	RC3H1	100	85.802	ENSGALG00000004587	RC3H1	100	85.714	Gallus_gallus
ENSSHAG00000007589	RC3H1	93	96.522	ENSGAGG00000018194	RC3H1	100	86.340	Gopherus_agassizii
ENSSHAG00000007589	RC3H1	100	85.903	ENSGGOG00000005735	RC3H1	100	85.514	Gorilla_gorilla
ENSSHAG00000007589	RC3H1	88	85.617	ENSHGLG00000004183	-	100	85.617	Heterocephalus_glaber_female
ENSSHAG00000007589	RC3H1	100	89.525	ENSHGLG00100008577	RC3H1	100	89.437	Heterocephalus_glaber_male
ENSSHAG00000007589	RC3H1	100	90.669	ENSSTOG00000016033	RC3H1	100	91.021	Ictidomys_tridecemlineatus
ENSSHAG00000007589	RC3H1	100	89.339	ENSJJAG00000018915	Rc3h1	100	89.339	Jaculus_jaculus
ENSSHAG00000007589	RC3H1	100	75.043	ENSLACG00000016186	RC3H1	100	78.361	Latimeria_chalumnae
ENSSHAG00000007589	RC3H1	97	91.909	ENSLAFG00000004367	RC3H1	100	91.818	Loxodonta_africana
ENSSHAG00000007589	RC3H1	100	91.278	ENSMFAG00000033725	RC3H1	100	91.189	Macaca_fascicularis
ENSSHAG00000007589	RC3H1	100	91.278	ENSMMUG00000000630	RC3H1	100	91.189	Macaca_mulatta
ENSSHAG00000007589	RC3H1	100	91.366	ENSMNEG00000035968	RC3H1	100	91.278	Macaca_nemestrina
ENSSHAG00000007589	RC3H1	100	91.278	ENSMLEG00000037455	RC3H1	100	91.189	Mandrillus_leucophaeus
ENSSHAG00000007589	RC3H1	88	90.040	ENSMAUG00000020864	Rc3h1	94	90.040	Mesocricetus_auratus
ENSSHAG00000007589	RC3H1	100	91.454	ENSMICG00000003000	RC3H1	100	91.366	Microcebus_murinus
ENSSHAG00000007589	RC3H1	93	88.091	ENSMOCG00000016587	Rc3h1	98	87.996	Microtus_ochrogaster
ENSSHAG00000007589	RC3H1	100	97.707	ENSMODG00000004289	RC3H1	100	97.707	Monodelphis_domestica
ENSSHAG00000007589	RC3H1	100	88.722	MGP_CAROLIEiJ_G0014756	Rc3h1	100	88.987	Mus_caroli
ENSSHAG00000007589	RC3H1	100	88.722	ENSMUSG00000040423	Rc3h1	100	88.634	Mus_musculus
ENSSHAG00000007589	RC3H1	100	88.899	MGP_PahariEiJ_G0027992	Rc3h1	100	88.811	Mus_pahari
ENSSHAG00000007589	RC3H1	100	88.634	MGP_SPRETEiJ_G0015563	Rc3h1	100	88.546	Mus_spretus
ENSSHAG00000007589	RC3H1	100	90.837	ENSMPUG00000004747	RC3H1	100	90.749	Mustela_putorius_furo
ENSSHAG00000007589	RC3H1	100	90.308	ENSMLUG00000011127	RC3H1	100	90.220	Myotis_lucifugus
ENSSHAG00000007589	RC3H1	100	90.396	ENSNGAG00000011135	Rc3h1	100	90.308	Nannospalax_galili
ENSSHAG00000007589	RC3H1	100	91.366	ENSNLEG00000015327	RC3H1	100	91.278	Nomascus_leucogenys
ENSSHAG00000007589	RC3H1	99	78.729	ENSOPRG00000013068	RC3H1	99	78.464	Ochotona_princeps
ENSSHAG00000007589	RC3H1	100	89.701	ENSODEG00000014185	RC3H1	100	89.789	Octodon_degus
ENSSHAG00000007589	RC3H1	100	90.647	ENSOANG00000000924	RC3H1	100	90.734	Ornithorhynchus_anatinus
ENSSHAG00000007589	RC3H1	99	90.885	ENSOCUG00000004930	RC3H1	98	90.795	Oryctolagus_cuniculus
ENSSHAG00000007589	RC3H1	100	84.433	ENSOGAG00000004044	RC3H1	100	84.345	Otolemur_garnettii
ENSSHAG00000007589	RC3H1	100	90.710	ENSOARG00000013011	RC3H1	100	90.622	Ovis_aries
ENSSHAG00000007589	RC3H1	100	91.542	ENSPPAG00000039253	RC3H1	100	91.454	Pan_paniscus
ENSSHAG00000007589	RC3H1	100	90.661	ENSPPRG00000009007	RC3H1	100	90.573	Panthera_pardus
ENSSHAG00000007589	RC3H1	100	90.526	ENSPTIG00000015326	RC3H1	100	90.789	Panthera_tigris_altaica
ENSSHAG00000007589	RC3H1	100	91.542	ENSPTRG00000001702	RC3H1	100	91.454	Pan_troglodytes
ENSSHAG00000007589	RC3H1	100	91.366	ENSPANG00000008886	RC3H1	100	91.278	Papio_anubis
ENSSHAG00000007589	RC3H1	100	86.865	ENSPSIG00000016181	RC3H1	100	87.040	Pelodiscus_sinensis
ENSSHAG00000007589	RC3H1	100	88.987	ENSPEMG00000011966	Rc3h1	100	88.987	Peromyscus_maniculatus_bairdii
ENSSHAG00000007589	RC3H1	70	98.352	ENSPCIG00000002058	RC3H1	98	98.352	Phascolarctos_cinereus
ENSSHAG00000007589	RC3H1	100	88.546	ENSPPYG00000000490	RC3H1	98	91.205	Pongo_abelii
ENSSHAG00000007589	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSSHAG00000007589	RC3H1	83	89.659	ENSPCOG00000021795	RC3H1	96	89.552	Propithecus_coquereli
ENSSHAG00000007589	RC3H1	100	82.026	ENSPVAG00000007593	RC3H1	100	82.026	Pteropus_vampyrus
ENSSHAG00000007589	RC3H1	97	61.687	ENSPNAG00000023439	rc3h1a	95	90.766	Pygocentrus_nattereri
ENSSHAG00000007589	RC3H1	100	91.454	ENSRBIG00000037743	RC3H1	100	91.366	Rhinopithecus_bieti
ENSSHAG00000007589	RC3H1	100	91.366	ENSRROG00000036546	RC3H1	100	91.278	Rhinopithecus_roxellana
ENSSHAG00000007589	RC3H1	93	83.427	ENSSBOG00000010664	RC3H1	100	90.476	Saimiri_boliviensis_boliviensis
ENSSHAG00000007589	RC3H1	92	86.261	ENSSARG00000004660	RC3H1	85	86.261	Sorex_araneus
ENSSHAG00000007589	RC3H1	100	82.925	ENSSPUG00000018472	RC3H1	100	83.275	Sphenodon_punctatus
ENSSHAG00000007589	RC3H1	100	91.454	ENSSSCG00000015498	RC3H1	100	91.366	Sus_scrofa
ENSSHAG00000007589	RC3H1	100	85.890	ENSTGUG00000004090	RC3H1	100	85.802	Taeniopygia_guttata
ENSSHAG00000007589	RC3H1	89	93.188	ENSTBEG00000005015	RC3H1	89	93.188	Tupaia_belangeri
ENSSHAG00000007589	RC3H1	100	90.669	ENSTTRG00000008572	RC3H1	100	90.581	Tursiops_truncatus
ENSSHAG00000007589	RC3H1	100	90.749	ENSUAMG00000019525	RC3H1	100	90.661	Ursus_americanus
ENSSHAG00000007589	RC3H1	100	91.189	ENSUMAG00000020087	RC3H1	100	91.101	Ursus_maritimus
ENSSHAG00000007589	RC3H1	91	98.198	ENSVPAG00000002591	RC3H1	92	98.198	Vicugna_pacos
ENSSHAG00000007589	RC3H1	100	90.869	ENSVVUG00000014201	RC3H1	100	90.255	Vulpes_vulpes
ENSSHAG00000007589	RC3H1	100	78.155	ENSXETG00000020030	rc3h1	100	78.155	Xenopus_tropicalis