EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000007680 (Gene tree)
Gene ID: 100930463
Gene Symbol: NEIL3
Alias: FLJ10858|FPG2|ZGRF3|hFPG2|hNEI3
Full Name: nei like DNA glycosylase 3
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 68255 bases
Position: chrGL864793.1:342595-410849
Accession: 100930463
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000008872	zf-RanBP	PF00641.18	4.1e-07	1	1
ENSSHAP00000008871	zf-RanBP	PF00641.18	4.1e-07	1	1
ENSSHAP00000008870	zf-RanBP	PF00641.18	4.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000008943	NEIL3-201	2612	-	ENSSHAP00000008870	620 (aa)	XP_023361606	G3W0B5
ENSSHAT00000008945	NEIL3-203	2570	-	ENSSHAP00000008872	606 (aa)	-	G3W0B7
ENSSHAT00000008944	NEIL3-202	2579	-	ENSSHAP00000008871	609 (aa)	-	G3W0B6

Gene Model

Click here to download ENSSHAG00000007680's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000007680's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000007680	NEIL3	100	67.105	ENSG00000109674	NEIL3	100	67.105	Homo_sapiens
ENSSHAG00000007680	NEIL3	100	50.000	ENSACIG00000002265	neil3	100	50.000	Amphilophus_citrinellus
ENSSHAG00000007680	NEIL3	100	50.647	ENSATEG00000004193	neil3	100	50.647	Anabas_testudineus
ENSSHAG00000007680	NEIL3	100	60.720	ENSANAG00000026464	NEIL3	100	60.720	Aotus_nancymaae
ENSSHAG00000007680	NEIL3	100	51.461	ENSACLG00000011270	neil3	100	51.461	Astatotilapia_calliptera
ENSSHAG00000007680	NEIL3	100	67.763	ENSBTAG00000005825	NEIL3	100	67.763	Bos_taurus
ENSSHAG00000007680	NEIL3	100	65.794	ENSCJAG00000005464	NEIL3	100	65.794	Callithrix_jacchus
ENSSHAG00000007680	NEIL3	100	66.941	ENSCHIG00000009157	NEIL3	100	66.941	Capra_hircus
ENSSHAG00000007680	NEIL3	100	68.791	ENSTSYG00000014680	NEIL3	100	68.791	Carlito_syrichta
ENSSHAG00000007680	NEIL3	84	67.836	ENSCAPG00000006333	NEIL3	98	67.836	Cavia_aperea
ENSSHAG00000007680	NEIL3	100	67.434	ENSCPOG00000003297	NEIL3	100	67.434	Cavia_porcellus
ENSSHAG00000007680	NEIL3	100	65.630	ENSCCAG00000018838	NEIL3	100	65.630	Cebus_capucinus
ENSSHAG00000007680	NEIL3	100	66.941	ENSCLAG00000015661	NEIL3	100	66.941	Chinchilla_lanigera
ENSSHAG00000007680	NEIL3	100	66.776	ENSCSAG00000003064	NEIL3	100	66.776	Chlorocebus_sabaeus
ENSSHAG00000007680	NEIL3	77	83.051	ENSCHOG00000008101	NEIL3	77	83.051	Choloepus_hoffmanni
ENSSHAG00000007680	NEIL3	100	66.338	ENSCANG00000043622	NEIL3	100	66.338	Colobus_angolensis_palliatus
ENSSHAG00000007680	NEIL3	100	51.858	ENSCSEG00000003828	neil3	99	51.858	Cynoglossus_semilaevis
ENSSHAG00000007680	NEIL3	100	52.174	ENSDARG00000020079	neil3	100	52.174	Danio_rerio
ENSSHAG00000007680	NEIL3	86	71.183	ENSDNOG00000012236	NEIL3	100	71.183	Dasypus_novemcinctus
ENSSHAG00000007680	NEIL3	100	65.794	ENSEASG00005022272	NEIL3	100	66.448	Equus_asinus_asinus
ENSSHAG00000007680	NEIL3	100	65.794	ENSECAG00000009121	NEIL3	100	66.448	Equus_caballus
ENSSHAG00000007680	NEIL3	74	59.251	ENSEEUG00000010848	NEIL3	100	59.251	Erinaceus_europaeus
ENSSHAG00000007680	NEIL3	100	67.103	ENSFCAG00000004956	NEIL3	100	67.103	Felis_catus
ENSSHAG00000007680	NEIL3	100	51.294	ENSHBUG00000023848	neil3	100	51.294	Haplochromis_burtoni
ENSSHAG00000007680	NEIL3	86	68.522	ENSHGLG00000006643	NEIL3	100	68.522	Heterocephalus_glaber_female
ENSSHAG00000007680	NEIL3	86	68.522	ENSHGLG00100006959	NEIL3	100	68.522	Heterocephalus_glaber_male
ENSSHAG00000007680	NEIL3	100	66.776	ENSSTOG00000016245	NEIL3	100	66.776	Ictidomys_tridecemlineatus
ENSSHAG00000007680	NEIL3	62	54.404	ENSLACG00000000308	NEIL3	99	54.404	Latimeria_chalumnae
ENSSHAG00000007680	NEIL3	100	66.447	ENSMFAG00000002547	NEIL3	100	66.447	Macaca_fascicularis
ENSSHAG00000007680	NEIL3	100	66.612	ENSMMUG00000007394	NEIL3	100	66.612	Macaca_mulatta
ENSSHAG00000007680	NEIL3	100	66.118	ENSMNEG00000036177	NEIL3	100	66.118	Macaca_nemestrina
ENSSHAG00000007680	NEIL3	100	51.378	ENSMAMG00000017052	neil3	100	51.378	Mastacembelus_armatus
ENSSHAG00000007680	NEIL3	100	51.294	ENSMZEG00005001680	neil3	100	51.294	Maylandia_zebra
ENSSHAG00000007680	NEIL3	90	78.253	ENSMODG00000003813	NEIL3	99	78.253	Monodelphis_domestica
ENSSHAG00000007680	NEIL3	100	65.359	MGP_CAROLIEiJ_G0031052	Neil3	100	65.359	Mus_caroli
ENSSHAG00000007680	NEIL3	100	65.196	ENSMUSG00000039396	Neil3	100	65.196	Mus_musculus
ENSSHAG00000007680	NEIL3	100	65.523	MGP_PahariEiJ_G0021518	Neil3	100	65.523	Mus_pahari
ENSSHAG00000007680	NEIL3	100	65.686	MGP_SPRETEiJ_G0032167	Neil3	100	65.686	Mus_spretus
ENSSHAG00000007680	NEIL3	100	50.247	ENSNBRG00000013229	neil3	100	50.247	Neolamprologus_brichardi
ENSSHAG00000007680	NEIL3	100	66.776	ENSNLEG00000016818	NEIL3	100	66.776	Nomascus_leucogenys
ENSSHAG00000007680	NEIL3	100	66.831	ENSODEG00000004102	NEIL3	100	67.049	Octodon_degus
ENSSHAG00000007680	NEIL3	100	52.019	ENSONIG00000001176	neil3	100	52.019	Oreochromis_niloticus
ENSSHAG00000007680	NEIL3	99	65.512	ENSOCUG00000001040	NEIL3	99	65.681	Oryctolagus_cuniculus
ENSSHAG00000007680	NEIL3	99	48.539	ENSOMEG00000014798	neil3	99	48.539	Oryzias_melastigma
ENSSHAG00000007680	NEIL3	100	65.789	ENSOGAG00000012624	NEIL3	100	65.789	Otolemur_garnettii
ENSSHAG00000007680	NEIL3	96	66.667	ENSOARG00000006852	NEIL3	99	68.231	Ovis_aries
ENSSHAG00000007680	NEIL3	100	67.270	ENSPPAG00000035318	NEIL3	100	67.270	Pan_paniscus
ENSSHAG00000007680	NEIL3	100	67.594	ENSPPRG00000003958	NEIL3	100	67.594	Panthera_pardus
ENSSHAG00000007680	NEIL3	100	67.758	ENSPTIG00000012966	NEIL3	100	67.758	Panthera_tigris_altaica
ENSSHAG00000007680	NEIL3	100	67.599	ENSPTRG00000016617	NEIL3	100	67.599	Pan_troglodytes
ENSSHAG00000007680	NEIL3	100	66.612	ENSPANG00000014727	NEIL3	100	67.892	Papio_anubis
ENSSHAG00000007680	NEIL3	100	49.838	ENSPFOG00000018858	neil3	100	49.838	Poecilia_formosa
ENSSHAG00000007680	NEIL3	100	49.676	ENSPLAG00000010685	neil3	100	49.676	Poecilia_latipinna
ENSSHAG00000007680	NEIL3	100	50.000	ENSPMEG00000013971	neil3	100	50.000	Poecilia_mexicana
ENSSHAG00000007680	NEIL3	100	49.106	ENSPREG00000009841	neil3	100	49.106	Poecilia_reticulata
ENSSHAG00000007680	NEIL3	68	78.814	ENSPCAG00000006386	NEIL3	81	78.814	Procavia_capensis
ENSSHAG00000007680	NEIL3	77	81.356	ENSPCOG00000010888	NEIL3	97	81.356	Propithecus_coquereli
ENSSHAG00000007680	NEIL3	99	66.667	ENSPVAG00000002255	NEIL3	99	66.667	Pteropus_vampyrus
ENSSHAG00000007680	NEIL3	100	52.039	ENSPNYG00000021276	neil3	100	52.039	Pundamilia_nyererei
ENSSHAG00000007680	NEIL3	98	48.241	ENSPNAG00000019983	neil3	100	47.906	Pygocentrus_nattereri
ENSSHAG00000007680	NEIL3	100	64.869	ENSRNOG00000011688	Neil3	100	64.869	Rattus_norvegicus
ENSSHAG00000007680	NEIL3	100	66.338	ENSRBIG00000023002	NEIL3	100	66.338	Rhinopithecus_bieti
ENSSHAG00000007680	NEIL3	100	66.338	ENSRROG00000000069	NEIL3	100	66.338	Rhinopithecus_roxellana
ENSSHAG00000007680	NEIL3	100	65.794	ENSSBOG00000032601	NEIL3	100	65.794	Saimiri_boliviensis_boliviensis
ENSSHAG00000007680	NEIL3	100	50.799	ENSSMAG00000009621	neil3	100	50.799	Scophthalmus_maximus
ENSSHAG00000007680	NEIL3	100	66.121	ENSSSCG00000015771	NEIL3	100	66.121	Sus_scrofa
ENSSHAG00000007680	NEIL3	100	66.776	ENSTTRG00000013224	NEIL3	100	66.776	Tursiops_truncatus
ENSSHAG00000007680	NEIL3	100	60.755	ENSVPAG00000005020	NEIL3	100	60.755	Vicugna_pacos
ENSSHAG00000007680	NEIL3	86	49.714	ENSXCOG00000014831	neil3	96	49.714	Xiphophorus_couchianus
ENSSHAG00000007680	NEIL3	100	49.032	ENSXMAG00000028638	neil3	100	49.032	Xiphophorus_maculatus