EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSHAG00000007727 (Gene tree)
Gene ID
100920142
Gene Symbol
RAB5B
Alias
-
Full Name
RAB5B%2C member RAS oncogene family
Gene Type
protein_coding
Species
Sarcophilus_harrisii
Status
putative
Strand
Minus strand
Length
5813 bases
Position
chrGL861720.1:346762-352574
Accession
100920142
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSHAP00000008922MMR_HSR1PF01926.230.0001111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSHAT00000008996RAB5B-201648-ENSSHAP00000008922215 (aa)XP_003772206G3W0G7
Gene Model
Click here to download ENSSHAG00000007727's gene model file
Pathways
Pathway IDPathway NameSource
shr04014Ras signaling pathwayKEGG
shr04144EndocytosisKEGG
shr04145PhagosomeKEGG
shr04962Vasopressin-regulated water reabsorptionKEGG
shr05146AmoebiasisKEGG
shr05152TuberculosisKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000007727's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSHAG00000007727RAB5B8036.842ENSSHAG00000013263RAB158336.158
ENSSHAG00000007727RAB5B8030.460ENSSHAG00000017856-8430.460
ENSSHAG00000007727RAB5B9442.718ENSSHAG00000003597RAB1A9443.878
ENSSHAG00000007727RAB5B7942.938ENSSHAG00000007613RAB188642.938
ENSSHAG00000007727RAB5B8735.638ENSSHAG00000001489RAB128335.638
ENSSHAG00000007727RAB5B9848.585ENSSHAG00000009306RAB179848.585
ENSSHAG00000007727RAB5B8834.158ENSSHAG00000008520-8934.158
ENSSHAG00000007727RAB5B10082.407ENSSHAG00000006787RAB5A10082.407
ENSSHAG00000007727RAB5B7842.442ENSSHAG00000016787RAB7A8342.442
ENSSHAG00000007727RAB5B7930.994ENSSHAG00000001457-8830.994
ENSSHAG00000007727RAB5B9885.308ENSSHAG00000005267-9885.308
ENSSHAG00000007727RAB5B7632.727ENSSHAG00000006631KRAS8332.335
ENSSHAG00000007727RAB5B9141.827ENSSHAG00000006816-9441.827
ENSSHAG00000007727RAB5B9047.959ENSSHAG00000016302RAB22A9847.959
ENSSHAG00000007727RAB5B6935.135ENSSHAG00000006379RAB236736.250
ENSSHAG00000007727RAB5B9140.686ENSSHAG00000006622RAB11A9440.686
ENSSHAG00000007727RAB5B8934.359ENSSHAG00000007153RAB3D8634.359
ENSSHAG00000007727RAB5B9040.196ENSSHAG00000013327RAB259340.196
ENSSHAG00000007727RAB5B7646.626ENSSHAG00000010376-8146.626
ENSSHAG00000007727RAB5B7436.478ENSSHAG00000006833-9636.478
ENSSHAG00000007727RAB5B8935.938ENSSHAG00000011866-9535.938
ENSSHAG00000007727RAB5B6930.000ENSSHAG00000016060RRAS28530.000
ENSSHAG00000007727RAB5B8640.217ENSSHAG00000013149-8740.217
ENSSHAG00000007727RAB5B9045.876ENSSHAG00000006085RAB319745.876
ENSSHAG00000007727RAB5B9034.826ENSSHAG00000012788RAB9B9734.826
ENSSHAG00000007727RAB5B7842.105ENSSHAG00000018081RAB308342.105
ENSSHAG00000007727RAB5B7544.720ENSSHAG00000017800RAB147544.720
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSHAG00000007727RAB5B10098.605ENSG00000111540RAB5B10099.130Homo_sapiens
ENSSHAG00000007727RAB5B10097.235ENSAMEG00000003196RAB5B10097.235Ailuropoda_melanoleuca
ENSSHAG00000007727RAB5B10096.279ENSACAG00000005380RAB5B10096.279Anolis_carolinensis
ENSSHAG00000007727RAB5B10098.605ENSANAG00000033215RAB5B9598.605Aotus_nancymaae
ENSSHAG00000007727RAB5B10098.140ENSBTAG00000014129RAB5B10098.140Bos_taurus
ENSSHAG00000007727RAB5B10098.605ENSCJAG00000041780RAB5B9598.605Callithrix_jacchus
ENSSHAG00000007727RAB5B10098.605ENSCAFG00000000087RAB5B10098.605Canis_familiaris
ENSSHAG00000007727RAB5B10098.605ENSCAFG00020026094RAB5B10098.605Canis_lupus_dingo
ENSSHAG00000007727RAB5B9898.104ENSCHIG00000010333RAB5B9898.104Capra_hircus
ENSSHAG00000007727RAB5B10098.140ENSTSYG00000009576RAB5B10098.140Carlito_syrichta
ENSSHAG00000007727RAB5B10098.605ENSCPOG00000034818RAB5B10098.605Cavia_porcellus
ENSSHAG00000007727RAB5B10097.674ENSCCAG00000019480RAB5B10097.674Cebus_capucinus
ENSSHAG00000007727RAB5B8398.883ENSCATG00000034978RAB5B9898.883Cercocebus_atys
ENSSHAG00000007727RAB5B10098.605ENSCSAG00000005277RAB5B10098.605Chlorocebus_sabaeus
ENSSHAG00000007727RAB5B10096.744ENSCPBG00000012712RAB5B10096.744Chrysemys_picta_bellii
ENSSHAG00000007727RAB5B10098.140ENSCGRG00001000428Rab5b10098.140Cricetulus_griseus_chok1gshd
ENSSHAG00000007727RAB5B10098.140ENSCGRG00000009508-10098.140Cricetulus_griseus_crigri
ENSSHAG00000007727RAB5B10098.605ENSDORG00000025063Rab5b10098.605Dipodomys_ordii
ENSSHAG00000007727RAB5B10098.605ENSECAG00000023306RAB5B10098.605Equus_caballus
ENSSHAG00000007727RAB5B10097.674ENSEEUG00000006745RAB5B10097.674Erinaceus_europaeus
ENSSHAG00000007727RAB5B10098.605ENSFDAG00000008326RAB5B10098.605Fukomys_damarensis
ENSSHAG00000007727RAB5B10098.140ENSHGLG00000005995RAB5B10098.140Heterocephalus_glaber_female
ENSSHAG00000007727RAB5B10098.140ENSHGLG00100012955RAB5B10098.140Heterocephalus_glaber_male
ENSSHAG00000007727RAB5B10098.140ENSSTOG00000010536RAB5B10098.140Ictidomys_tridecemlineatus
ENSSHAG00000007727RAB5B10099.070ENSJJAG00000019506Rab5b10099.070Jaculus_jaculus
ENSSHAG00000007727RAB5B10097.696ENSLAFG00000018009RAB5B9597.696Loxodonta_africana
ENSSHAG00000007727RAB5B10098.605ENSMFAG00000029992RAB5B10098.605Macaca_fascicularis
ENSSHAG00000007727RAB5B10098.605ENSMMUG00000031853RAB5B10098.605Macaca_mulatta
ENSSHAG00000007727RAB5B10098.605ENSMNEG00000005338RAB5B10098.605Macaca_nemestrina
ENSSHAG00000007727RAB5B10098.605ENSMLEG00000034462RAB5B10098.605Mandrillus_leucophaeus
ENSSHAG00000007727RAB5B10098.605ENSMAUG00000011613Rab5b10098.605Mesocricetus_auratus
ENSSHAG00000007727RAB5B10098.140ENSMICG00000011086RAB5B10098.140Microcebus_murinus
ENSSHAG00000007727RAB5B10098.605ENSMUSG00000000711Rab5b10098.605Mus_musculus
ENSSHAG00000007727RAB5B10098.605MGP_PahariEiJ_G0031135Rab5b10098.605Mus_pahari
ENSSHAG00000007727RAB5B10098.140MGP_SPRETEiJ_G0016774Rab5b10098.140Mus_spretus
ENSSHAG00000007727RAB5B9997.222ENSMPUG00000000946RAB5B8997.222Mustela_putorius_furo
ENSSHAG00000007727RAB5B10098.605ENSNLEG00000017570-10098.605Nomascus_leucogenys
ENSSHAG00000007727RAB5B10098.605ENSOPRG00000007883RAB5B10098.605Ochotona_princeps
ENSSHAG00000007727RAB5B10098.140ENSODEG00000003860RAB5B10098.140Octodon_degus
ENSSHAG00000007727RAB5B10098.605ENSOCUG00000013895RAB5B9598.605Oryctolagus_cuniculus
ENSSHAG00000007727RAB5B10098.605ENSOARG00000010651RAB5B9598.605Ovis_aries
ENSSHAG00000007727RAB5B10098.605ENSPPAG00000035431RAB5B10098.605Pan_paniscus
ENSSHAG00000007727RAB5B10098.605ENSPTRG00000005071RAB5B9898.104Pan_troglodytes
ENSSHAG00000007727RAB5B9997.664ENSPANG00000021075RAB5B9797.664Papio_anubis
ENSSHAG00000007727RAB5B10098.605ENSPCOG00000016461RAB5B10098.605Propithecus_coquereli
ENSSHAG00000007727RAB5B10098.140ENSRNOG00000006130Rab5b10098.140Rattus_norvegicus
ENSSHAG00000007727RAB5B10098.605ENSRBIG00000013165RAB5B10098.605Rhinopithecus_bieti
ENSSHAG00000007727RAB5B10098.605ENSRROG00000037973RAB5B10098.605Rhinopithecus_roxellana
ENSSHAG00000007727RAB5B10082.791ENSSBOG00000035419RAB5B10082.791Saimiri_boliviensis_boliviensis
ENSSHAG00000007727RAB5B10098.605ENSSARG00000006237RAB5B10098.605Sorex_araneus
ENSSHAG00000007727RAB5B10096.279ENSSPUG00000014873RAB5B10096.279Sphenodon_punctatus
ENSSHAG00000007727RAB5B10098.605ENSTTRG00000015001RAB5B10098.605Tursiops_truncatus
ENSSHAG00000007727RAB5B10098.140ENSUAMG00000014651RAB5B10098.140Ursus_americanus
ENSSHAG00000007727RAB5B10098.140ENSUMAG00000016263RAB5B10098.140Ursus_maritimus
ENSSHAG00000007727RAB5B6899.315ENSVVUG00000022054RAB5B8199.315Vulpes_vulpes

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