EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000007919 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 2938 bases
Position: chrGL841185.1:367169-370106
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000009145	DEAD	PF00270.29	2.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000009223	-	1824	-	ENSSHAP00000009145	608 (aa)	-	G3W140

Gene Model

Click here to download ENSSHAG00000007919's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000007919's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000007919	-	99	67.560	ENSSHAG00000012896	-	71	67.560
ENSSHAG00000007919	-	50	32.231	ENSSHAG00000012772	DDX5	53	32.231
ENSSHAG00000007919	-	53	32.216	ENSSHAG00000004578	DDX17	57	33.425

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000007919	-	99	60.979	ENSG00000198231	DDX42	81	61.424	Homo_sapiens
ENSSHAG00000007919	-	87	52.730	ENSAPOG00000017675	ddx42	67	52.152	Acanthochromis_polyacanthus
ENSSHAG00000007919	-	99	61.481	ENSAMEG00000003200	DDX42	71	61.926	Ailuropoda_melanoleuca
ENSSHAG00000007919	-	99	49.774	ENSACIG00000007376	ddx42	83	50.224	Amphilophus_citrinellus
ENSSHAG00000007919	-	87	52.881	ENSAOCG00000003520	ddx42	71	49.123	Amphiprion_ocellaris
ENSSHAG00000007919	-	99	49.037	ENSAPEG00000000984	ddx42	71	49.481	Amphiprion_percula
ENSSHAG00000007919	-	99	48.895	ENSATEG00000022920	ddx42	72	49.242	Anabas_testudineus
ENSSHAG00000007919	-	99	55.670	ENSAPLG00000010544	DDX42	71	56.047	Anas_platyrhynchos
ENSSHAG00000007919	-	99	56.036	ENSACAG00000003994	DDX42	70	56.148	Anolis_carolinensis
ENSSHAG00000007919	-	99	60.714	ENSANAG00000035693	DDX42	78	64.158	Aotus_nancymaae
ENSSHAG00000007919	-	85	53.022	ENSACLG00000025113	ddx42	71	49.774	Astatotilapia_calliptera
ENSSHAG00000007919	-	99	60.149	ENSBTAG00000021058	DDX42	77	64.469	Bos_taurus
ENSSHAG00000007919	-	99	60.565	ENSCJAG00000019649	DDX42	76	64.247	Callithrix_jacchus
ENSSHAG00000007919	-	99	61.070	ENSCAFG00000012818	DDX42	71	61.516	Canis_familiaris
ENSSHAG00000007919	-	99	61.128	ENSCAFG00020026631	DDX42	71	61.573	Canis_lupus_dingo
ENSSHAG00000007919	-	99	60.767	ENSCHIG00000014431	DDX42	71	61.652	Capra_hircus
ENSSHAG00000007919	-	99	58.211	ENSTSYG00000001380	DDX42	74	61.470	Carlito_syrichta
ENSSHAG00000007919	-	80	50.185	ENSCAPG00000013621	DDX42	78	50.185	Cavia_aperea
ENSSHAG00000007919	-	99	60.089	ENSCPOG00000005633	DDX42	71	60.386	Cavia_porcellus
ENSSHAG00000007919	-	99	60.358	ENSCCAG00000020612	DDX42	82	60.921	Cebus_capucinus
ENSSHAG00000007919	-	99	61.276	ENSCATG00000030490	DDX42	71	64.065	Cercocebus_atys
ENSSHAG00000007919	-	99	60.921	ENSCLAG00000003497	DDX42	71	60.921	Chinchilla_lanigera
ENSSHAG00000007919	-	98	60.752	ENSCSAG00000003914	DDX42	70	61.203	Chlorocebus_sabaeus
ENSSHAG00000007919	-	99	56.541	ENSCPBG00000026682	DDX42	71	57.413	Chrysemys_picta_bellii
ENSSHAG00000007919	-	63	45.309	ENSCING00000001837	-	95	45.309	Ciona_intestinalis
ENSSHAG00000007919	-	54	49.211	ENSCSAVG00000002180	-	99	49.211	Ciona_savignyi
ENSSHAG00000007919	-	99	61.276	ENSCANG00000034663	DDX42	81	61.721	Colobus_angolensis_palliatus
ENSSHAG00000007919	-	99	59.407	ENSCGRG00001009775	Ddx42	71	60.417	Cricetulus_griseus_chok1gshd
ENSSHAG00000007919	-	99	59.407	ENSCGRG00000011718	Ddx42	71	60.417	Cricetulus_griseus_crigri
ENSSHAG00000007919	-	99	48.286	ENSCSEG00000021574	ddx42	72	49.327	Cynoglossus_semilaevis
ENSSHAG00000007919	-	99	48.421	ENSCVAG00000011404	ddx42	71	49.321	Cyprinodon_variegatus
ENSSHAG00000007919	-	99	46.936	ENSDARG00000037928	ddx42	70	47.025	Danio_rerio
ENSSHAG00000007919	-	99	54.383	ENSDNOG00000007961	DDX42	70	55.126	Dasypus_novemcinctus
ENSSHAG00000007919	-	99	58.370	ENSDORG00000004199	Ddx42	74	58.370	Dipodomys_ordii
ENSSHAG00000007919	-	64	44.176	FBgn0036104	CG6418	57	44.176	Drosophila_melanogaster
ENSSHAG00000007919	-	73	53.663	ENSEBUG00000001155	ddx42	60	53.465	Eptatretus_burgeri
ENSSHAG00000007919	-	99	60.534	ENSEASG00005013089	DDX42	78	64.364	Equus_asinus_asinus
ENSSHAG00000007919	-	99	60.534	ENSECAG00000022684	DDX42	71	61.721	Equus_caballus
ENSSHAG00000007919	-	52	64.685	ENSEEUG00000009144	DDX42	50	64.685	Erinaceus_europaeus
ENSSHAG00000007919	-	99	48.235	ENSELUG00000020593	ddx42	72	48.382	Esox_lucius
ENSSHAG00000007919	-	99	60.979	ENSFCAG00000003499	DDX42	82	62.166	Felis_catus
ENSSHAG00000007919	-	99	60.386	ENSFDAG00000020516	DDX42	71	60.534	Fukomys_damarensis
ENSSHAG00000007919	-	99	48.876	ENSFHEG00000023290	ddx42	70	48.449	Fundulus_heteroclitus
ENSSHAG00000007919	-	99	55.058	ENSGALG00000000581	DDX42	71	55.491	Gallus_gallus
ENSSHAG00000007919	-	87	52.470	ENSGAFG00000011846	ddx42	66	52.152	Gambusia_affinis
ENSSHAG00000007919	-	84	49.917	ENSGACG00000009782	ddx42	67	50.590	Gasterosteus_aculeatus
ENSSHAG00000007919	-	99	57.872	ENSGAGG00000024411	DDX42	71	57.872	Gopherus_agassizii
ENSSHAG00000007919	-	99	61.128	ENSGGOG00000006779	DDX42	77	64.065	Gorilla_gorilla
ENSSHAG00000007919	-	85	53.022	ENSHBUG00000008705	ddx42	70	49.774	Haplochromis_burtoni
ENSSHAG00000007919	-	99	60.863	ENSHGLG00000010024	DDX42	74	60.863	Heterocephalus_glaber_female
ENSSHAG00000007919	-	99	60.979	ENSHGLG00100004479	-	74	60.863	Heterocephalus_glaber_male
ENSSHAG00000007919	-	97	52.558	ENSHGLG00100007138	-	72	52.558	Heterocephalus_glaber_male
ENSSHAG00000007919	-	75	57.143	ENSHCOG00000003357	ddx42	82	47.281	Hippocampus_comes
ENSSHAG00000007919	-	69	56.723	ENSIPUG00000013327	ddx42	70	48.042	Ictalurus_punctatus
ENSSHAG00000007919	-	99	61.391	ENSSTOG00000008922	DDX42	71	61.391	Ictidomys_tridecemlineatus
ENSSHAG00000007919	-	99	60.389	ENSJJAG00000011727	Ddx42	71	60.688	Jaculus_jaculus
ENSSHAG00000007919	-	84	51.910	ENSKMAG00000009914	ddx42	71	49.408	Kryptolebias_marmoratus
ENSSHAG00000007919	-	85	55.882	ENSLACG00000013476	DDX42	68	52.624	Latimeria_chalumnae
ENSSHAG00000007919	-	99	49.028	ENSLOCG00000011764	ddx42	71	49.408	Lepisosteus_oculatus
ENSSHAG00000007919	-	99	60.624	ENSLAFG00000003249	DDX42	71	61.367	Loxodonta_africana
ENSSHAG00000007919	-	99	61.128	ENSMFAG00000031356	DDX42	72	64.065	Macaca_fascicularis
ENSSHAG00000007919	-	99	61.161	ENSMMUG00000016762	DDX42	81	61.573	Macaca_mulatta
ENSSHAG00000007919	-	99	61.128	ENSMNEG00000038250	DDX42	72	64.065	Macaca_nemestrina
ENSSHAG00000007919	-	99	61.276	ENSMLEG00000043080	DDX42	71	62.842	Mandrillus_leucophaeus
ENSSHAG00000007919	-	87	52.891	ENSMAMG00000021888	ddx42	70	49.118	Mastacembelus_armatus
ENSSHAG00000007919	-	85	53.022	ENSMZEG00005023103	ddx42	70	49.774	Maylandia_zebra
ENSSHAG00000007919	-	99	54.820	ENSMGAG00000001822	DDX42	71	55.108	Meleagris_gallopavo
ENSSHAG00000007919	-	82	63.620	ENSMAUG00000020774	-	74	63.620	Mesocricetus_auratus
ENSSHAG00000007919	-	99	60.714	ENSMICG00000009952	DDX42	74	61.276	Microcebus_murinus
ENSSHAG00000007919	-	99	59.226	ENSMOCG00000015504	Ddx42	71	59.226	Microtus_ochrogaster
ENSSHAG00000007919	-	83	52.338	ENSMMOG00000016963	ddx42	59	52.151	Mola_mola
ENSSHAG00000007919	-	99	50.150	ENSMALG00000007800	ddx42	70	50.749	Monopterus_albus
ENSSHAG00000007919	-	99	59.259	MGP_CAROLIEiJ_G0017314	Ddx42	71	60.119	Mus_caroli
ENSSHAG00000007919	-	99	59.111	ENSMUSG00000020705	Ddx42	71	59.970	Mus_musculus
ENSSHAG00000007919	-	57	64.589	MGP_PahariEiJ_G0018444	-	58	64.373	Mus_pahari
ENSSHAG00000007919	-	99	58.963	MGP_SPRETEiJ_G0018158	Ddx42	71	59.821	Mus_spretus
ENSSHAG00000007919	-	99	60.441	ENSMPUG00000014921	DDX42	71	61.618	Mustela_putorius_furo
ENSSHAG00000007919	-	99	58.866	ENSMLUG00000011645	DDX42	71	60.320	Myotis_lucifugus
ENSSHAG00000007919	-	99	60.921	ENSNGAG00000021897	Ddx42	71	60.921	Nannospalax_galili
ENSSHAG00000007919	-	85	53.022	ENSNBRG00000004466	ddx42	71	49.774	Neolamprologus_brichardi
ENSSHAG00000007919	-	99	61.276	ENSNLEG00000004248	DDX42	78	64.247	Nomascus_leucogenys
ENSSHAG00000007919	-	79	64.602	ENSMEUG00000013227	-	67	64.602	Notamacropus_eugenii
ENSSHAG00000007919	-	99	60.831	ENSOPRG00000014960	DDX42	71	61.573	Ochotona_princeps
ENSSHAG00000007919	-	99	60.976	ENSODEG00000007810	DDX42	70	60.976	Octodon_degus
ENSSHAG00000007919	-	85	53.195	ENSONIG00000000734	ddx42	70	49.774	Oreochromis_niloticus
ENSSHAG00000007919	-	54	62.211	ENSOANG00000000265	DDX42	72	62.211	Ornithorhynchus_anatinus
ENSSHAG00000007919	-	91	61.367	ENSOCUG00000004304	DDX42	61	63.344	Oryctolagus_cuniculus
ENSSHAG00000007919	-	99	47.376	ENSORLG00000002395	ddx42	71	49.925	Oryzias_latipes
ENSSHAG00000007919	-	99	48.946	ENSORLG00020011621	ddx42	71	50.376	Oryzias_latipes_hni
ENSSHAG00000007919	-	99	48.795	ENSORLG00015004487	ddx42	71	49.548	Oryzias_latipes_hsok
ENSSHAG00000007919	-	73	57.285	ENSOMEG00000020093	ddx42	70	50.301	Oryzias_melastigma
ENSSHAG00000007919	-	99	61.778	ENSOGAG00000006872	DDX42	71	62.222	Otolemur_garnettii
ENSSHAG00000007919	-	99	59.389	ENSOARG00000013540	DDX42	71	60.699	Ovis_aries
ENSSHAG00000007919	-	99	61.276	ENSPPAG00000007496	DDX42	77	64.247	Pan_paniscus
ENSSHAG00000007919	-	99	60.682	ENSPPRG00000002740	DDX42	71	61.869	Panthera_pardus
ENSSHAG00000007919	-	99	60.831	ENSPTIG00000009932	DDX42	71	62.018	Panthera_tigris_altaica
ENSSHAG00000007919	-	99	61.276	ENSPTRG00000009523	DDX42	77	64.247	Pan_troglodytes
ENSSHAG00000007919	-	99	61.276	ENSPANG00000020990	DDX42	73	63.978	Papio_anubis
ENSSHAG00000007919	-	64	59.326	ENSPKIG00000002901	ddx42	69	47.519	Paramormyrops_kingsleyae
ENSSHAG00000007919	-	76	63.534	ENSPSIG00000010289	DDX42	65	63.383	Pelodiscus_sinensis
ENSSHAG00000007919	-	87	51.361	ENSPMGG00000009323	ddx42	72	48.872	Periophthalmus_magnuspinnatus
ENSSHAG00000007919	-	99	59.763	ENSPEMG00000006755	Ddx42	71	60.773	Peromyscus_maniculatus_bairdii
ENSSHAG00000007919	-	74	53.280	ENSPMAG00000005580	ddx42	64	53.465	Petromyzon_marinus
ENSSHAG00000007919	-	99	67.411	ENSPCIG00000009093	DDX42	71	67.411	Phascolarctos_cinereus
ENSSHAG00000007919	-	87	52.721	ENSPFOG00000014104	ddx42	71	49.265	Poecilia_formosa
ENSSHAG00000007919	-	87	52.551	ENSPLAG00000010522	ddx42	73	48.971	Poecilia_latipinna
ENSSHAG00000007919	-	99	47.353	ENSPMEG00000010744	ddx42	71	49.265	Poecilia_mexicana
ENSSHAG00000007919	-	99	46.479	ENSPREG00000009926	ddx42	71	48.613	Poecilia_reticulata
ENSSHAG00000007919	-	99	59.050	ENSPPYG00000008531	DDX42	71	59.496	Pongo_abelii
ENSSHAG00000007919	-	99	58.012	ENSPCAG00000002474	DDX42	77	59.199	Procavia_capensis
ENSSHAG00000007919	-	89	57.516	ENSPCOG00000001559	DDX42	77	58.011	Propithecus_coquereli
ENSSHAG00000007919	-	99	59.496	ENSPVAG00000000160	DDX42	71	59.496	Pteropus_vampyrus
ENSSHAG00000007919	-	85	52.473	ENSPNYG00000013954	ddx42	80	49.233	Pundamilia_nyererei
ENSSHAG00000007919	-	99	59.556	ENSRNOG00000009474	Ddx42	71	60.565	Rattus_norvegicus
ENSSHAG00000007919	-	99	61.128	ENSRBIG00000004781	DDX42	81	61.573	Rhinopithecus_bieti
ENSSHAG00000007919	-	99	61.128	ENSRROG00000029794	DDX42	81	61.573	Rhinopithecus_roxellana
ENSSHAG00000007919	-	99	60.656	ENSSBOG00000029624	DDX42	77	64.364	Saimiri_boliviensis_boliviensis
ENSSHAG00000007919	-	64	61.348	ENSSFOG00015014064	ddx42	53	58.571	Scleropages_formosus
ENSSHAG00000007919	-	99	48.657	ENSSMAG00000009077	ddx42	85	49.703	Scophthalmus_maximus
ENSSHAG00000007919	-	99	49.321	ENSSDUG00000022221	ddx42	71	49.323	Seriola_dumerili
ENSSHAG00000007919	-	99	49.319	ENSSLDG00000018483	ddx42	70	49.321	Seriola_lalandi_dorsalis
ENSSHAG00000007919	-	99	60.178	ENSSARG00000009847	DDX42	71	61.367	Sorex_araneus
ENSSHAG00000007919	-	99	56.866	ENSSPUG00000018806	DDX42	71	56.866	Sphenodon_punctatus
ENSSHAG00000007919	-	87	52.365	ENSSPAG00000013055	ddx42	70	49.188	Stegastes_partitus
ENSSHAG00000007919	-	99	60.296	ENSSSCG00000017289	DDX42	83	61.630	Sus_scrofa
ENSSHAG00000007919	-	99	56.029	ENSTGUG00000001931	DDX42	71	56.029	Taeniopygia_guttata
ENSSHAG00000007919	-	99	49.020	ENSTRUG00000010711	ddx42	64	50.075	Takifugu_rubripes
ENSSHAG00000007919	-	69	61.795	ENSTBEG00000010159	DDX42	63	61.795	Tupaia_belangeri
ENSSHAG00000007919	-	99	60.889	ENSTTRG00000006962	DDX42	71	61.926	Tursiops_truncatus
ENSSHAG00000007919	-	99	61.630	ENSUAMG00000007321	DDX42	71	62.074	Ursus_americanus
ENSSHAG00000007919	-	99	61.481	ENSUMAG00000017438	DDX42	71	61.926	Ursus_maritimus
ENSSHAG00000007919	-	99	57.675	ENSVPAG00000009633	DDX42	71	58.867	Vicugna_pacos
ENSSHAG00000007919	-	99	61.276	ENSVVUG00000006095	DDX42	71	61.721	Vulpes_vulpes
ENSSHAG00000007919	-	99	50.735	ENSXETG00000003245	ddx42	71	50.735	Xenopus_tropicalis
ENSSHAG00000007919	-	99	49.096	ENSXCOG00000017560	ddx42	81	49.321	Xiphophorus_couchianus
ENSSHAG00000007919	-	99	49.398	ENSXMAG00000008138	ddx42	70	49.623	Xiphophorus_maculatus