EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • Orthologs
Description
Ensembl ID
ENSSHAG00000007969 (Gene tree)
Gene ID
100928826
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Sarcophilus_harrisii
Status
putative
Strand
Plus strand
Length
76379 bases
Position
chrGL857007.1:371371-447749
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSHAP00000009204tRNA_anti-codonPF01336.253.9e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSHAT00000009283RPA1-2014730-ENSSHAP00000009204621 (aa)-G3W199
Gene Model
Click here to download ENSSHAG00000007969's gene model file
Pathways
Pathway IDPathway NameSource
shr03030DNA replicationKEGG
shr03420Nucleotide excision repairKEGG
shr03430Mismatch repairKEGG
shr03440Homologous recombinationKEGG
shr03460Fanconi anemia pathwayKEGG
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSHAG00000007969RPA19758.929ENSAPOG00000019409RPA17865.217Acanthochromis_polyacanthus
ENSSHAG00000007969RPA19861.375ENSAPOG00000011658rpa19961.856Acanthochromis_polyacanthus
ENSSHAG00000007969RPA19884.565ENSAMEG00000007706RPA19884.236Ailuropoda_melanoleuca
ENSSHAG00000007969RPA19557.360ENSACIG00000007277rpa19956.684Amphilophus_citrinellus
ENSSHAG00000007969RPA19559.696ENSACIG00000012881RPA19959.528Amphilophus_citrinellus
ENSSHAG00000007969RPA19862.131ENSAOCG00000023376rpa19962.306Amphiprion_ocellaris
ENSSHAG00000007969RPA19855.300ENSAOCG00000009003RPA19855.745Amphiprion_ocellaris
ENSSHAG00000007969RPA19854.780ENSAPEG00000019132RPA18265.760Amphiprion_percula
ENSSHAG00000007969RPA19862.295ENSAPEG00000008634rpa19962.478Amphiprion_percula
ENSSHAG00000007969RPA19463.761ENSATEG00000022024rpa19963.761Anabas_testudineus
ENSSHAG00000007969RPA19656.962ENSATEG00000006443RPA19756.329Anabas_testudineus
ENSSHAG00000007969RPA19777.033ENSAPLG00000012442RPA19077.033Anas_platyrhynchos
ENSSHAG00000007969RPA19862.981ENSACAG00000014490RPA19864.169Anolis_carolinensis
ENSSHAG00000007969RPA19783.775ENSANAG00000023456RPA19983.444Aotus_nancymaae
ENSSHAG00000007969RPA19363.951ENSACLG00000006640rpa19963.951Astatotilapia_calliptera
ENSSHAG00000007969RPA19658.360ENSACLG00000005223RPA19758.132Astatotilapia_calliptera
ENSSHAG00000007969RPA19861.639ENSAMXG00000008418rpa19961.475Astyanax_mexicanus
ENSSHAG00000007969RPA19883.961ENSBTAG00000009711RPA19983.797Bos_taurus
ENSSHAG00000007969RPA16930.734WBGene00017546rpa-16530.734Caenorhabditis_elegans
ENSSHAG00000007969RPA19883.306ENSCJAG00000001848RPA19982.979Callithrix_jacchus
ENSSHAG00000007969RPA19884.918ENSCAFG00000019249RPA19984.590Canis_familiaris
ENSSHAG00000007969RPA19884.918ENSCAFG00020009847RPA19984.590Canis_lupus_dingo
ENSSHAG00000007969RPA19883.633ENSCHIG00000026308RPA19983.306Capra_hircus
ENSSHAG00000007969RPA19884.124ENSTSYG00000003482-9983.797Carlito_syrichta
ENSSHAG00000007969RPA19882.160ENSCPOG00000000035RPA19981.997Cavia_porcellus
ENSSHAG00000007969RPA19872.638ENSCCAG00000010981RPA19972.313Cebus_capucinus
ENSSHAG00000007969RPA19883.142ENSCLAG00000005185-9982.815Chinchilla_lanigera
ENSSHAG00000007969RPA19878.396ENSCLAG00000015045-9978.232Chinchilla_lanigera
ENSSHAG00000007969RPA19871.336ENSCSAG00000013833RPA19971.707Chlorocebus_sabaeus
ENSSHAG00000007969RPA19582.313ENSCHOG00000013540-9982.143Choloepus_hoffmanni
ENSSHAG00000007969RPA17087.872ENSCHOG00000009454-9987.872Choloepus_hoffmanni
ENSSHAG00000007969RPA19880.656ENSCPBG00000020377RPA19981.086Chrysemys_picta_bellii
ENSSHAG00000007969RPA19842.464ENSCING00000023482-9842.787Ciona_intestinalis
ENSSHAG00000007969RPA19779.504ENSCANG00000030911RPA19979.504Colobus_angolensis_palliatus
ENSSHAG00000007969RPA19883.660ENSCGRG00001008197Rpa19983.497Cricetulus_griseus_chok1gshd
ENSSHAG00000007969RPA18182.643ENSCGRG00000000582Rpa19982.446Cricetulus_griseus_crigri
ENSSHAG00000007969RPA19753.710ENSCSEG00000012726RPA19854.217Cynoglossus_semilaevis
ENSSHAG00000007969RPA19860.784ENSCSEG00000013066rpa19959.738Cynoglossus_semilaevis
ENSSHAG00000007969RPA19554.378ENSCVAG00000013446-9653.917Cyprinodon_variegatus
ENSSHAG00000007969RPA19564.587ENSCVAG00000019431rpa19964.818Cyprinodon_variegatus
ENSSHAG00000007969RPA19863.934ENSDARG00000003938rpa19963.115Danio_rerio
ENSSHAG00000007969RPA19885.362ENSDNOG00000017218RPA19885.033Dasypus_novemcinctus
ENSSHAG00000007969RPA19883.934ENSDORG00000006199Rpa19983.607Dipodomys_ordii
ENSSHAG00000007969RPA19841.667FBgn0010173RpA-709742.484Drosophila_melanogaster
ENSSHAG00000007969RPA18285.859ENSETEG00000017608RPA18285.859Echinops_telfairi
ENSSHAG00000007969RPA19785.997ENSEASG00005009372RPA19885.667Equus_asinus_asinus
ENSSHAG00000007969RPA19886.557ENSECAG00000023886RPA19986.230Equus_caballus
ENSSHAG00000007969RPA16787.112ENSEEUG00000002186-6887.112Erinaceus_europaeus
ENSSHAG00000007969RPA19962.806ENSELUG00000021071rpa19961.974Esox_lucius
ENSSHAG00000007969RPA18756.058ENSELUG00000006136RPA19956.058Esox_lucius
ENSSHAG00000007969RPA19884.615ENSFCAG00000006306RPA19984.288Felis_catus
ENSSHAG00000007969RPA19876.346ENSFALG00000006575RPA19976.346Ficedula_albicollis
ENSSHAG00000007969RPA19883.934ENSFDAG00000007720RPA19983.770Fukomys_damarensis
ENSSHAG00000007969RPA19563.406ENSFHEG00000003580rpa19663.069Fundulus_heteroclitus
ENSSHAG00000007969RPA19859.672ENSGMOG00000010382rpa19959.672Gadus_morhua
ENSSHAG00000007969RPA19876.759ENSGALG00000003072RPA19976.596Gallus_gallus
ENSSHAG00000007969RPA19563.805ENSGAFG00000012916rpa19762.542Gambusia_affinis
ENSSHAG00000007969RPA19855.215ENSGAFG00000020953RPA19954.601Gambusia_affinis
ENSSHAG00000007969RPA19861.438ENSGACG00000010856rpa19960.884Gasterosteus_aculeatus
ENSSHAG00000007969RPA19880.328ENSGAGG00000013611RPA19879.836Gopherus_agassizii
ENSSHAG00000007969RPA19880.328ENSGGOG00000014186RPA19980.328Gorilla_gorilla
ENSSHAG00000007969RPA19564.141ENSHBUG00000017773rpa19862.233Haplochromis_burtoni
ENSSHAG00000007969RPA19554.409ENSHBUG00000009348RPA19954.167Haplochromis_burtoni
ENSSHAG00000007969RPA19884.262ENSHGLG00000008846RPA19983.934Heterocephalus_glaber_female
ENSSHAG00000007969RPA19884.262ENSHGLG00100017755-9983.934Heterocephalus_glaber_male
ENSSHAG00000007969RPA19871.803ENSHGLG00100002005-9971.148Heterocephalus_glaber_male
ENSSHAG00000007969RPA19878.689ENSHGLG00100000799-9978.361Heterocephalus_glaber_male
ENSSHAG00000007969RPA19644.113ENSHCOG00000000351RPA19643.947Hippocampus_comes
ENSSHAG00000007969RPA19561.214ENSHCOG00000001401rpa19661.448Hippocampus_comes
ENSSHAG00000007969RPA19863.011ENSIPUG00000004400rpa19962.459Ictalurus_punctatus
ENSSHAG00000007969RPA19778.303ENSSTOG00000022475RPA19978.140Ictidomys_tridecemlineatus
ENSSHAG00000007969RPA19583.871ENSJJAG00000000876Rpa19883.531Jaculus_jaculus
ENSSHAG00000007969RPA19861.175ENSKMAG00000005605rpa19961.827Kryptolebias_marmoratus
ENSSHAG00000007969RPA19856.230ENSKMAG00000000234RPA19855.340Kryptolebias_marmoratus
ENSSHAG00000007969RPA19861.866ENSLBEG00000021604rpa19960.884Labrus_bergylta
ENSSHAG00000007969RPA19565.000ENSLBEG00000002281RPA18765.000Labrus_bergylta
ENSSHAG00000007969RPA18066.667ENSLACG00000007210RPA19767.901Latimeria_chalumnae
ENSSHAG00000007969RPA19866.939ENSLOCG00000006397rpa19966.285Lepisosteus_oculatus
ENSSHAG00000007969RPA19783.687ENSLAFG00000015354RPA19883.142Loxodonta_africana
ENSSHAG00000007969RPA18182.840ENSMFAG00000036138-9983.268Macaca_fascicularis
ENSSHAG00000007969RPA19876.307ENSMMUG00000002442-9976.144Macaca_mulatta
ENSSHAG00000007969RPA19783.140ENSMMUG00000011604-9983.498Macaca_mulatta
ENSSHAG00000007969RPA18879.710ENSMNEG00000029837-9979.710Macaca_nemestrina
ENSSHAG00000007969RPA19581.726ENSMNEG00000031632-9882.095Macaca_nemestrina
ENSSHAG00000007969RPA19777.430ENSMLEG00000038768-9977.355Mandrillus_leucophaeus
ENSSHAG00000007969RPA19563.805ENSMAMG00000017993rpa19962.371Mastacembelus_armatus
ENSSHAG00000007969RPA19553.528ENSMAMG00000020097RPA16563.864Mastacembelus_armatus
ENSSHAG00000007969RPA19658.360ENSMZEG00005024731RPA19758.132Maylandia_zebra
ENSSHAG00000007969RPA19862.848ENSMZEG00005007551rpa19962.193Maylandia_zebra
ENSSHAG00000007969RPA19875.530ENSMGAG00000005315RPA19975.367Meleagris_gallopavo
ENSSHAG00000007969RPA19784.718ENSMAUG00000010474Rpa19984.551Mesocricetus_auratus
ENSSHAG00000007969RPA19883.934ENSMICG00000012867RPA19983.934Microcebus_murinus
ENSSHAG00000007969RPA19883.415ENSMOCG00000013019Rpa19983.251Microtus_ochrogaster
ENSSHAG00000007969RPA19757.119ENSMMOG00000010868RPA19861.283Mola_mola
ENSSHAG00000007969RPA19562.373ENSMMOG00000014292rpa19961.616Mola_mola
ENSSHAG00000007969RPA19995.765ENSMODG00000010549RPA19995.765Monodelphis_domestica
ENSSHAG00000007969RPA19863.175ENSMALG00000011453rpa19962.848Monopterus_albus
ENSSHAG00000007969RPA19860.248ENSMALG00000001208RPA17664.073Monopterus_albus
ENSSHAG00000007969RPA19882.787MGP_CAROLIEiJ_G0016734Rpa19982.459Mus_caroli
ENSSHAG00000007969RPA19881.169ENSMUSG00000000751Rpa19981.006Mus_musculus
ENSSHAG00000007969RPA19883.034MGP_PahariEiJ_G0017871Rpa19982.708Mus_pahari
ENSSHAG00000007969RPA19881.199MGP_SPRETEiJ_G0017577Rpa19981.037Mus_spretus
ENSSHAG00000007969RPA19884.262ENSMPUG00000013119RPA19983.934Mustela_putorius_furo
ENSSHAG00000007969RPA19881.169ENSMLUG00000006113RPA19981.006Myotis_lucifugus
ENSSHAG00000007969RPA19584.550ENSNGAG00000004522Rpa19484.380Nannospalax_galili
ENSSHAG00000007969RPA19463.746ENSNBRG00000020595rpa19963.746Neolamprologus_brichardi
ENSSHAG00000007969RPA19656.734ENSNBRG00000009672RPA19556.734Neolamprologus_brichardi
ENSSHAG00000007969RPA19882.787ENSNLEG00000017149RPA19982.815Nomascus_leucogenys
ENSSHAG00000007969RPA19884.704ENSMEUG00000006714RPA19984.046Notamacropus_eugenii
ENSSHAG00000007969RPA19581.940ENSODEG00000009038RPA19681.711Octodon_degus
ENSSHAG00000007969RPA19863.132ENSONIG00000013135rpa19962.075Oreochromis_niloticus
ENSSHAG00000007969RPA19784.793ENSOANG00000010880RPA19984.463Ornithorhynchus_anatinus
ENSSHAG00000007969RPA19880.967ENSOCUG00000001504RPA19980.125Oryctolagus_cuniculus
ENSSHAG00000007969RPA19862.684ENSORLG00000004856rpa19961.967Oryzias_latipes
ENSSHAG00000007969RPA19555.031ENSORLG00000003368RPA19754.488Oryzias_latipes
ENSSHAG00000007969RPA19553.478ENSORLG00020015284RPA18660.125Oryzias_latipes_hni
ENSSHAG00000007969RPA19862.848ENSORLG00020008980rpa19962.131Oryzias_latipes_hni
ENSSHAG00000007969RPA19555.377ENSORLG00015020383RPA19754.896Oryzias_latipes_hsok
ENSSHAG00000007969RPA16762.981ENSORLG00015005867-9562.981Oryzias_latipes_hsok
ENSSHAG00000007969RPA19862.848ENSORLG00015013982rpa19962.131Oryzias_latipes_hsok
ENSSHAG00000007969RPA19754.093ENSOMEG00000011040RPA19957.366Oryzias_melastigma
ENSSHAG00000007969RPA19861.047ENSOMEG00000004704rpa19960.492Oryzias_melastigma
ENSSHAG00000007969RPA19279.359ENSOGAG00000029379-9877.936Otolemur_garnettii
ENSSHAG00000007969RPA19883.607ENSOGAG00000005581-9983.443Otolemur_garnettii
ENSSHAG00000007969RPA19883.633ENSOARG00000014479RPA19983.306Ovis_aries
ENSSHAG00000007969RPA19882.623ENSPPAG00000039680RPA19982.651Pan_paniscus
ENSSHAG00000007969RPA19884.452ENSPPRG00000011807RPA19984.124Panthera_pardus
ENSSHAG00000007969RPA19884.288ENSPTIG00000007898RPA19983.961Panthera_tigris_altaica
ENSSHAG00000007969RPA19882.623ENSPTRG00000008539RPA19982.651Pan_troglodytes
ENSSHAG00000007969RPA19882.651ENSPANG00000024592RPA19983.007Papio_anubis
ENSSHAG00000007969RPA19363.040ENSPKIG00000008053rpa19363.212Paramormyrops_kingsleyae
ENSSHAG00000007969RPA19779.368ENSPSIG00000015617RPA19978.843Pelodiscus_sinensis
ENSSHAG00000007969RPA19562.755ENSPMGG00000011589rpa19862.925Periophthalmus_magnuspinnatus
ENSSHAG00000007969RPA19456.507ENSPMGG00000000543RPA19957.043Periophthalmus_magnuspinnatus
ENSSHAG00000007969RPA19883.744ENSPEMG00000021061Rpa19983.415Peromyscus_maniculatus_bairdii
ENSSHAG00000007969RPA19994.951ENSPCIG00000019049RPA19994.625Phascolarctos_cinereus
ENSSHAG00000007969RPA19563.912ENSPFOG00000003987rpa19663.131Poecilia_formosa
ENSSHAG00000007969RPA19563.636ENSPLAG00000004984rpa19662.963Poecilia_latipinna
ENSSHAG00000007969RPA19056.333ENSPLAG00000008844-9455.980Poecilia_latipinna
ENSSHAG00000007969RPA19563.912ENSPMEG00000020602rpa19963.636Poecilia_mexicana
ENSSHAG00000007969RPA19056.500ENSPMEG00000003627-9356.260Poecilia_mexicana
ENSSHAG00000007969RPA19654.186ENSPREG00000010119RPA18562.213Poecilia_reticulata
ENSSHAG00000007969RPA19155.986ENSPREG00000010174rpa19555.106Poecilia_reticulata
ENSSHAG00000007969RPA19884.262ENSPCOG00000001799RPA19983.934Propithecus_coquereli
ENSSHAG00000007969RPA19883.770ENSPVAG00000002149RPA19983.443Pteropus_vampyrus
ENSSHAG00000007969RPA19564.310ENSPNYG00000016316rpa19963.903Pundamilia_nyererei
ENSSHAG00000007969RPA19658.039ENSPNYG00000024165RPA19757.810Pundamilia_nyererei
ENSSHAG00000007969RPA19855.189ENSPNAG00000008599rpa19756.197Pygocentrus_nattereri
ENSSHAG00000007969RPA19786.957ENSRNOG00000003123Rpa19984.401Rattus_norvegicus
ENSSHAG00000007969RPA19882.516ENSRBIG00000036587RPA19982.353Rhinopithecus_bieti
ENSSHAG00000007969RPA19876.634ENSRROG00000043278RPA19976.471Rhinopithecus_roxellana
ENSSHAG00000007969RPA19531.947YAR007CRFA16837.825Saccharomyces_cerevisiae
ENSSHAG00000007969RPA19780.000ENSSBOG00000030233RPA19979.669Saimiri_boliviensis_boliviensis
ENSSHAG00000007969RPA19864.098ENSSFOG00015005362rpa19164.098Scleropages_formosus
ENSSHAG00000007969RPA19753.313ENSSMAG00000019746RPA19853.159Scophthalmus_maximus
ENSSHAG00000007969RPA19853.176ENSSDUG00000016358RPA18266.000Seriola_dumerili
ENSSHAG00000007969RPA19863.666ENSSDUG00000011949rpa19962.848Seriola_dumerili
ENSSHAG00000007969RPA19863.115ENSSLDG00000011806rpa19962.295Seriola_lalandi_dorsalis
ENSSHAG00000007969RPA19852.725ENSSLDG00000020784RPA18165.996Seriola_lalandi_dorsalis
ENSSHAG00000007969RPA19766.612ENSSARG00000007506RPA19966.116Sorex_araneus
ENSSHAG00000007969RPA19675.920ENSSPUG00000007223RPA19975.753Sphenodon_punctatus
ENSSHAG00000007969RPA19862.357ENSSPAG00000009903rpa19961.311Stegastes_partitus
ENSSHAG00000007969RPA19758.843ENSSPAG00000011165RPA19858.581Stegastes_partitus
ENSSHAG00000007969RPA19784.437ENSSSCG00000017822RPA19984.106Sus_scrofa
ENSSHAG00000007969RPA19876.759ENSTGUG00000005775RPA19976.759Taeniopygia_guttata
ENSSHAG00000007969RPA19863.547ENSTRUG00000003616rpa19963.322Takifugu_rubripes
ENSSHAG00000007969RPA19564.019ENSTRUG00000000405RPA17463.616Takifugu_rubripes
ENSSHAG00000007969RPA19864.821ENSTNIG00000016199rpa19963.902Tetraodon_nigroviridis
ENSSHAG00000007969RPA17892.857ENSTBEG00000002709RPA18192.857Tupaia_belangeri
ENSSHAG00000007969RPA19884.477ENSTTRG00000001169RPA19984.150Tursiops_truncatus
ENSSHAG00000007969RPA18890.385ENSUAMG00000015676RPA19790.385Ursus_americanus
ENSSHAG00000007969RPA19884.590ENSUMAG00000009328RPA19984.262Ursus_maritimus
ENSSHAG00000007969RPA19980.945ENSVPAG00000009443RPA19980.782Vicugna_pacos
ENSSHAG00000007969RPA19884.918ENSVVUG00000021715RPA19984.590Vulpes_vulpes
ENSSHAG00000007969RPA19872.787ENSXETG00000013538rpa19872.623Xenopus_tropicalis
ENSSHAG00000007969RPA19456.997ENSXCOG00000009899-9956.655Xiphophorus_couchianus
ENSSHAG00000007969RPA19260.801ENSXCOG00000010068rpa19461.441Xiphophorus_couchianus
ENSSHAG00000007969RPA19562.732ENSXMAG00000004102rpa19962.478Xiphophorus_maculatus
ENSSHAG00000007969RPA19553.010ENSXMAG00000010333RPA19162.343Xiphophorus_maculatus

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