EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSHAG00000007969 (Gene tree)
Gene ID
100928826
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Sarcophilus_harrisii
Status
putative
Strand
Plus strand
Length
76379 bases
Position
chrGL857007.1:371371-447749
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSHAP00000009204tRNA_anti-codonPF01336.253.9e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSHAT00000009283RPA1-2014730-ENSSHAP00000009204621 (aa)-G3W199
Gene Model
Click here to download ENSSHAG00000007969's gene model file
Pathways
Pathway IDPathway NameSource
shr03030DNA replicationKEGG
shr03420Nucleotide excision repairKEGG
shr03430Mismatch repairKEGG
shr03440Homologous recombinationKEGG
shr03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000007969's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSHAG00000007969RPA19758.929ENSAPOG00000019409RPA17865.217Acanthochromis_polyacanthus
ENSSHAG00000007969RPA19861.375ENSAPOG00000011658rpa19961.856Acanthochromis_polyacanthus
ENSSHAG00000007969RPA19884.565ENSAMEG00000007706RPA19884.236Ailuropoda_melanoleuca
ENSSHAG00000007969RPA19557.360ENSACIG00000007277rpa19956.684Amphilophus_citrinellus
ENSSHAG00000007969RPA19559.696ENSACIG00000012881RPA19959.528Amphilophus_citrinellus
ENSSHAG00000007969RPA19862.131ENSAOCG00000023376rpa19962.306Amphiprion_ocellaris
ENSSHAG00000007969RPA19855.300ENSAOCG00000009003RPA19855.745Amphiprion_ocellaris
ENSSHAG00000007969RPA19854.780ENSAPEG00000019132RPA18265.760Amphiprion_percula
ENSSHAG00000007969RPA19862.295ENSAPEG00000008634rpa19962.478Amphiprion_percula
ENSSHAG00000007969RPA19463.761ENSATEG00000022024rpa19963.761Anabas_testudineus
ENSSHAG00000007969RPA19656.962ENSATEG00000006443RPA19756.329Anabas_testudineus
ENSSHAG00000007969RPA19777.033ENSAPLG00000012442RPA19077.033Anas_platyrhynchos
ENSSHAG00000007969RPA19862.981ENSACAG00000014490RPA19864.169Anolis_carolinensis
ENSSHAG00000007969RPA19783.775ENSANAG00000023456RPA19983.444Aotus_nancymaae
ENSSHAG00000007969RPA19363.951ENSACLG00000006640rpa19963.951Astatotilapia_calliptera
ENSSHAG00000007969RPA19658.360ENSACLG00000005223RPA19758.132Astatotilapia_calliptera
ENSSHAG00000007969RPA19861.639ENSAMXG00000008418rpa19961.475Astyanax_mexicanus
ENSSHAG00000007969RPA19883.961ENSBTAG00000009711RPA19983.797Bos_taurus
ENSSHAG00000007969RPA16930.734WBGene00017546rpa-16530.734Caenorhabditis_elegans
ENSSHAG00000007969RPA19883.306ENSCJAG00000001848RPA19982.979Callithrix_jacchus
ENSSHAG00000007969RPA19884.918ENSCAFG00000019249RPA19984.590Canis_familiaris
ENSSHAG00000007969RPA19884.918ENSCAFG00020009847RPA19984.590Canis_lupus_dingo
ENSSHAG00000007969RPA19883.633ENSCHIG00000026308RPA19983.306Capra_hircus
ENSSHAG00000007969RPA19884.124ENSTSYG00000003482-9983.797Carlito_syrichta
ENSSHAG00000007969RPA19882.160ENSCPOG00000000035RPA19981.997Cavia_porcellus
ENSSHAG00000007969RPA19872.638ENSCCAG00000010981RPA19972.313Cebus_capucinus
ENSSHAG00000007969RPA19883.142ENSCLAG00000005185-9982.815Chinchilla_lanigera
ENSSHAG00000007969RPA19878.396ENSCLAG00000015045-9978.232Chinchilla_lanigera
ENSSHAG00000007969RPA19871.336ENSCSAG00000013833RPA19971.707Chlorocebus_sabaeus
ENSSHAG00000007969RPA19582.313ENSCHOG00000013540-9982.143Choloepus_hoffmanni
ENSSHAG00000007969RPA17087.872ENSCHOG00000009454-9987.872Choloepus_hoffmanni
ENSSHAG00000007969RPA19880.656ENSCPBG00000020377RPA19981.086Chrysemys_picta_bellii
ENSSHAG00000007969RPA19842.464ENSCING00000023482-9842.787Ciona_intestinalis
ENSSHAG00000007969RPA19779.504ENSCANG00000030911RPA19979.504Colobus_angolensis_palliatus
ENSSHAG00000007969RPA19883.660ENSCGRG00001008197Rpa19983.497Cricetulus_griseus_chok1gshd
ENSSHAG00000007969RPA18182.643ENSCGRG00000000582Rpa19982.446Cricetulus_griseus_crigri
ENSSHAG00000007969RPA19753.710ENSCSEG00000012726RPA19854.217Cynoglossus_semilaevis
ENSSHAG00000007969RPA19860.784ENSCSEG00000013066rpa19959.738Cynoglossus_semilaevis
ENSSHAG00000007969RPA19554.378ENSCVAG00000013446-9653.917Cyprinodon_variegatus
ENSSHAG00000007969RPA19564.587ENSCVAG00000019431rpa19964.818Cyprinodon_variegatus
ENSSHAG00000007969RPA19863.934ENSDARG00000003938rpa19963.115Danio_rerio
ENSSHAG00000007969RPA19885.362ENSDNOG00000017218RPA19885.033Dasypus_novemcinctus
ENSSHAG00000007969RPA19883.934ENSDORG00000006199Rpa19983.607Dipodomys_ordii
ENSSHAG00000007969RPA19841.667FBgn0010173RpA-709742.484Drosophila_melanogaster
ENSSHAG00000007969RPA18285.859ENSETEG00000017608RPA18285.859Echinops_telfairi
ENSSHAG00000007969RPA19785.997ENSEASG00005009372RPA19885.667Equus_asinus_asinus
ENSSHAG00000007969RPA19886.557ENSECAG00000023886RPA19986.230Equus_caballus
ENSSHAG00000007969RPA16787.112ENSEEUG00000002186-6887.112Erinaceus_europaeus
ENSSHAG00000007969RPA19962.806ENSELUG00000021071rpa19961.974Esox_lucius
ENSSHAG00000007969RPA18756.058ENSELUG00000006136RPA19956.058Esox_lucius
ENSSHAG00000007969RPA19884.615ENSFCAG00000006306RPA19984.288Felis_catus
ENSSHAG00000007969RPA19876.346ENSFALG00000006575RPA19976.346Ficedula_albicollis
ENSSHAG00000007969RPA19883.934ENSFDAG00000007720RPA19983.770Fukomys_damarensis
ENSSHAG00000007969RPA19563.406ENSFHEG00000003580rpa19663.069Fundulus_heteroclitus
ENSSHAG00000007969RPA19859.672ENSGMOG00000010382rpa19959.672Gadus_morhua
ENSSHAG00000007969RPA19876.759ENSGALG00000003072RPA19976.596Gallus_gallus
ENSSHAG00000007969RPA19563.805ENSGAFG00000012916rpa19762.542Gambusia_affinis
ENSSHAG00000007969RPA19855.215ENSGAFG00000020953RPA19954.601Gambusia_affinis
ENSSHAG00000007969RPA19861.438ENSGACG00000010856rpa19960.884Gasterosteus_aculeatus
ENSSHAG00000007969RPA19880.328ENSGAGG00000013611RPA19879.836Gopherus_agassizii
ENSSHAG00000007969RPA19880.328ENSGGOG00000014186RPA19980.328Gorilla_gorilla
ENSSHAG00000007969RPA19564.141ENSHBUG00000017773rpa19862.233Haplochromis_burtoni
ENSSHAG00000007969RPA19554.409ENSHBUG00000009348RPA19954.167Haplochromis_burtoni
ENSSHAG00000007969RPA19884.262ENSHGLG00000008846RPA19983.934Heterocephalus_glaber_female
ENSSHAG00000007969RPA19884.262ENSHGLG00100017755-9983.934Heterocephalus_glaber_male
ENSSHAG00000007969RPA19871.803ENSHGLG00100002005-9971.148Heterocephalus_glaber_male
ENSSHAG00000007969RPA19878.689ENSHGLG00100000799-9978.361Heterocephalus_glaber_male
ENSSHAG00000007969RPA19644.113ENSHCOG00000000351RPA19643.947Hippocampus_comes
ENSSHAG00000007969RPA19561.214ENSHCOG00000001401rpa19661.448Hippocampus_comes
ENSSHAG00000007969RPA19863.011ENSIPUG00000004400rpa19962.459Ictalurus_punctatus
ENSSHAG00000007969RPA19778.303ENSSTOG00000022475RPA19978.140Ictidomys_tridecemlineatus
ENSSHAG00000007969RPA19583.871ENSJJAG00000000876Rpa19883.531Jaculus_jaculus
ENSSHAG00000007969RPA19861.175ENSKMAG00000005605rpa19961.827Kryptolebias_marmoratus
ENSSHAG00000007969RPA19856.230ENSKMAG00000000234RPA19855.340Kryptolebias_marmoratus
ENSSHAG00000007969RPA19861.866ENSLBEG00000021604rpa19960.884Labrus_bergylta
ENSSHAG00000007969RPA19565.000ENSLBEG00000002281RPA18765.000Labrus_bergylta
ENSSHAG00000007969RPA18066.667ENSLACG00000007210RPA19767.901Latimeria_chalumnae
ENSSHAG00000007969RPA19866.939ENSLOCG00000006397rpa19966.285Lepisosteus_oculatus
ENSSHAG00000007969RPA19783.687ENSLAFG00000015354RPA19883.142Loxodonta_africana
ENSSHAG00000007969RPA18182.840ENSMFAG00000036138-9983.268Macaca_fascicularis
ENSSHAG00000007969RPA19876.307ENSMMUG00000002442-9976.144Macaca_mulatta
ENSSHAG00000007969RPA19783.140ENSMMUG00000011604-9983.498Macaca_mulatta
ENSSHAG00000007969RPA18879.710ENSMNEG00000029837-9979.710Macaca_nemestrina
ENSSHAG00000007969RPA19581.726ENSMNEG00000031632-9882.095Macaca_nemestrina
ENSSHAG00000007969RPA19777.430ENSMLEG00000038768-9977.355Mandrillus_leucophaeus
ENSSHAG00000007969RPA19563.805ENSMAMG00000017993rpa19962.371Mastacembelus_armatus
ENSSHAG00000007969RPA19553.528ENSMAMG00000020097RPA16563.864Mastacembelus_armatus
ENSSHAG00000007969RPA19658.360ENSMZEG00005024731RPA19758.132Maylandia_zebra
ENSSHAG00000007969RPA19862.848ENSMZEG00005007551rpa19962.193Maylandia_zebra
ENSSHAG00000007969RPA19875.530ENSMGAG00000005315RPA19975.367Meleagris_gallopavo
ENSSHAG00000007969RPA19784.718ENSMAUG00000010474Rpa19984.551Mesocricetus_auratus
ENSSHAG00000007969RPA19883.934ENSMICG00000012867RPA19983.934Microcebus_murinus
ENSSHAG00000007969RPA19883.415ENSMOCG00000013019Rpa19983.251Microtus_ochrogaster
ENSSHAG00000007969RPA19757.119ENSMMOG00000010868RPA19861.283Mola_mola
ENSSHAG00000007969RPA19562.373ENSMMOG00000014292rpa19961.616Mola_mola
ENSSHAG00000007969RPA19995.765ENSMODG00000010549RPA19995.765Monodelphis_domestica
ENSSHAG00000007969RPA19863.175ENSMALG00000011453rpa19962.848Monopterus_albus
ENSSHAG00000007969RPA19860.248ENSMALG00000001208RPA17664.073Monopterus_albus
ENSSHAG00000007969RPA19882.787MGP_CAROLIEiJ_G0016734Rpa19982.459Mus_caroli
ENSSHAG00000007969RPA19881.169ENSMUSG00000000751Rpa19981.006Mus_musculus
ENSSHAG00000007969RPA19883.034MGP_PahariEiJ_G0017871Rpa19982.708Mus_pahari
ENSSHAG00000007969RPA19881.199MGP_SPRETEiJ_G0017577Rpa19981.037Mus_spretus
ENSSHAG00000007969RPA19884.262ENSMPUG00000013119RPA19983.934Mustela_putorius_furo
ENSSHAG00000007969RPA19881.169ENSMLUG00000006113RPA19981.006Myotis_lucifugus
ENSSHAG00000007969RPA19584.550ENSNGAG00000004522Rpa19484.380Nannospalax_galili
ENSSHAG00000007969RPA19463.746ENSNBRG00000020595rpa19963.746Neolamprologus_brichardi
ENSSHAG00000007969RPA19656.734ENSNBRG00000009672RPA19556.734Neolamprologus_brichardi
ENSSHAG00000007969RPA19882.787ENSNLEG00000017149RPA19982.815Nomascus_leucogenys
ENSSHAG00000007969RPA19884.704ENSMEUG00000006714RPA19984.046Notamacropus_eugenii
ENSSHAG00000007969RPA19581.940ENSODEG00000009038RPA19681.711Octodon_degus
ENSSHAG00000007969RPA19863.132ENSONIG00000013135rpa19962.075Oreochromis_niloticus
ENSSHAG00000007969RPA19784.793ENSOANG00000010880RPA19984.463Ornithorhynchus_anatinus
ENSSHAG00000007969RPA19880.967ENSOCUG00000001504RPA19980.125Oryctolagus_cuniculus
ENSSHAG00000007969RPA19862.684ENSORLG00000004856rpa19961.967Oryzias_latipes
ENSSHAG00000007969RPA19555.031ENSORLG00000003368RPA19754.488Oryzias_latipes
ENSSHAG00000007969RPA19553.478ENSORLG00020015284RPA18660.125Oryzias_latipes_hni
ENSSHAG00000007969RPA19862.848ENSORLG00020008980rpa19962.131Oryzias_latipes_hni
ENSSHAG00000007969RPA19555.377ENSORLG00015020383RPA19754.896Oryzias_latipes_hsok
ENSSHAG00000007969RPA16762.981ENSORLG00015005867-9562.981Oryzias_latipes_hsok
ENSSHAG00000007969RPA19862.848ENSORLG00015013982rpa19962.131Oryzias_latipes_hsok
ENSSHAG00000007969RPA19754.093ENSOMEG00000011040RPA19957.366Oryzias_melastigma
ENSSHAG00000007969RPA19861.047ENSOMEG00000004704rpa19960.492Oryzias_melastigma
ENSSHAG00000007969RPA19279.359ENSOGAG00000029379-9877.936Otolemur_garnettii
ENSSHAG00000007969RPA19883.607ENSOGAG00000005581-9983.443Otolemur_garnettii
ENSSHAG00000007969RPA19883.633ENSOARG00000014479RPA19983.306Ovis_aries
ENSSHAG00000007969RPA19882.623ENSPPAG00000039680RPA19982.651Pan_paniscus
ENSSHAG00000007969RPA19884.452ENSPPRG00000011807RPA19984.124Panthera_pardus
ENSSHAG00000007969RPA19884.288ENSPTIG00000007898RPA19983.961Panthera_tigris_altaica
ENSSHAG00000007969RPA19882.623ENSPTRG00000008539RPA19982.651Pan_troglodytes
ENSSHAG00000007969RPA19882.651ENSPANG00000024592RPA19983.007Papio_anubis
ENSSHAG00000007969RPA19363.040ENSPKIG00000008053rpa19363.212Paramormyrops_kingsleyae
ENSSHAG00000007969RPA19779.368ENSPSIG00000015617RPA19978.843Pelodiscus_sinensis
ENSSHAG00000007969RPA19562.755ENSPMGG00000011589rpa19862.925Periophthalmus_magnuspinnatus
ENSSHAG00000007969RPA19456.507ENSPMGG00000000543RPA19957.043Periophthalmus_magnuspinnatus
ENSSHAG00000007969RPA19883.744ENSPEMG00000021061Rpa19983.415Peromyscus_maniculatus_bairdii
ENSSHAG00000007969RPA19994.951ENSPCIG00000019049RPA19994.625Phascolarctos_cinereus
ENSSHAG00000007969RPA19563.912ENSPFOG00000003987rpa19663.131Poecilia_formosa
ENSSHAG00000007969RPA19563.636ENSPLAG00000004984rpa19662.963Poecilia_latipinna
ENSSHAG00000007969RPA19056.333ENSPLAG00000008844-9455.980Poecilia_latipinna
ENSSHAG00000007969RPA19563.912ENSPMEG00000020602rpa19963.636Poecilia_mexicana
ENSSHAG00000007969RPA19056.500ENSPMEG00000003627-9356.260Poecilia_mexicana
ENSSHAG00000007969RPA19654.186ENSPREG00000010119RPA18562.213Poecilia_reticulata
ENSSHAG00000007969RPA19155.986ENSPREG00000010174rpa19555.106Poecilia_reticulata
ENSSHAG00000007969RPA19884.262ENSPCOG00000001799RPA19983.934Propithecus_coquereli
ENSSHAG00000007969RPA19883.770ENSPVAG00000002149RPA19983.443Pteropus_vampyrus
ENSSHAG00000007969RPA19564.310ENSPNYG00000016316rpa19963.903Pundamilia_nyererei
ENSSHAG00000007969RPA19658.039ENSPNYG00000024165RPA19757.810Pundamilia_nyererei
ENSSHAG00000007969RPA19855.189ENSPNAG00000008599rpa19756.197Pygocentrus_nattereri
ENSSHAG00000007969RPA19786.957ENSRNOG00000003123Rpa19984.401Rattus_norvegicus
ENSSHAG00000007969RPA19882.516ENSRBIG00000036587RPA19982.353Rhinopithecus_bieti
ENSSHAG00000007969RPA19876.634ENSRROG00000043278RPA19976.471Rhinopithecus_roxellana
ENSSHAG00000007969RPA19531.947YAR007CRFA16837.825Saccharomyces_cerevisiae
ENSSHAG00000007969RPA19780.000ENSSBOG00000030233RPA19979.669Saimiri_boliviensis_boliviensis
ENSSHAG00000007969RPA19864.098ENSSFOG00015005362rpa19164.098Scleropages_formosus
ENSSHAG00000007969RPA19753.313ENSSMAG00000019746RPA19853.159Scophthalmus_maximus
ENSSHAG00000007969RPA19853.176ENSSDUG00000016358RPA18266.000Seriola_dumerili
ENSSHAG00000007969RPA19863.666ENSSDUG00000011949rpa19962.848Seriola_dumerili
ENSSHAG00000007969RPA19863.115ENSSLDG00000011806rpa19962.295Seriola_lalandi_dorsalis
ENSSHAG00000007969RPA19852.725ENSSLDG00000020784RPA18165.996Seriola_lalandi_dorsalis
ENSSHAG00000007969RPA19766.612ENSSARG00000007506RPA19966.116Sorex_araneus
ENSSHAG00000007969RPA19675.920ENSSPUG00000007223RPA19975.753Sphenodon_punctatus
ENSSHAG00000007969RPA19862.357ENSSPAG00000009903rpa19961.311Stegastes_partitus
ENSSHAG00000007969RPA19758.843ENSSPAG00000011165RPA19858.581Stegastes_partitus
ENSSHAG00000007969RPA19784.437ENSSSCG00000017822RPA19984.106Sus_scrofa
ENSSHAG00000007969RPA19876.759ENSTGUG00000005775RPA19976.759Taeniopygia_guttata
ENSSHAG00000007969RPA19863.547ENSTRUG00000003616rpa19963.322Takifugu_rubripes
ENSSHAG00000007969RPA19564.019ENSTRUG00000000405RPA17463.616Takifugu_rubripes
ENSSHAG00000007969RPA19864.821ENSTNIG00000016199rpa19963.902Tetraodon_nigroviridis
ENSSHAG00000007969RPA17892.857ENSTBEG00000002709RPA18192.857Tupaia_belangeri
ENSSHAG00000007969RPA19884.477ENSTTRG00000001169RPA19984.150Tursiops_truncatus
ENSSHAG00000007969RPA18890.385ENSUAMG00000015676RPA19790.385Ursus_americanus
ENSSHAG00000007969RPA19884.590ENSUMAG00000009328RPA19984.262Ursus_maritimus
ENSSHAG00000007969RPA19980.945ENSVPAG00000009443RPA19980.782Vicugna_pacos
ENSSHAG00000007969RPA19884.918ENSVVUG00000021715RPA19984.590Vulpes_vulpes
ENSSHAG00000007969RPA19872.787ENSXETG00000013538rpa19872.623Xenopus_tropicalis
ENSSHAG00000007969RPA19456.997ENSXCOG00000009899-9956.655Xiphophorus_couchianus
ENSSHAG00000007969RPA19260.801ENSXCOG00000010068rpa19461.441Xiphophorus_couchianus
ENSSHAG00000007969RPA19562.732ENSXMAG00000004102rpa19962.478Xiphophorus_maculatus
ENSSHAG00000007969RPA19553.010ENSXMAG00000010333RPA19162.343Xiphophorus_maculatus

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