EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000008181 (Gene tree)
Gene ID: 100932761
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 7800 bases
Position: chrGL841404.1:392373-400172
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000009454	RRM_1	PF00076.22	4.5e-28	1	2
ENSSHAP00000009454	RRM_1	PF00076.22	4.5e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000009537	-	4766	-	ENSSHAP00000009454	706 (aa)	-	G3W1Z9

Gene Model

Click here to download ENSSHAG00000008181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000008181's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000008181	-	71	50.000	ENSSHAG00000014568	RAVER2	92	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000008181	-	90	76.775	ENSG00000161847	RAVER1	90	77.219	Homo_sapiens
ENSSHAG00000008181	-	64	58.785	ENSAPOG00000017267	raver1	78	51.613	Acanthochromis_polyacanthus
ENSSHAG00000008181	-	90	76.991	ENSAMEG00000011738	RAVER1	88	77.286	Ailuropoda_melanoleuca
ENSSHAG00000008181	-	89	52.167	ENSAOCG00000005128	raver1	82	51.235	Amphiprion_ocellaris
ENSSHAG00000008181	-	72	86.792	ENSAPEG00000010854	raver1	75	86.792	Amphiprion_percula
ENSSHAG00000008181	-	90	52.615	ENSATEG00000021004	raver1	85	52.287	Anabas_testudineus
ENSSHAG00000008181	-	79	66.892	ENSACAG00000008386	-	85	66.554	Anolis_carolinensis
ENSSHAG00000008181	-	90	76.627	ENSANAG00000028226	RAVER1	88	77.071	Aotus_nancymaae
ENSSHAG00000008181	-	76	91.667	ENSACLG00000018492	raver1	85	52.879	Astatotilapia_calliptera
ENSSHAG00000008181	-	91	51.484	ENSAMXG00000005132	raver1	89	51.627	Astyanax_mexicanus
ENSSHAG00000008181	-	90	78.939	ENSBTAG00000015721	RAVER1	86	85.801	Bos_taurus
ENSSHAG00000008181	-	90	76.219	ENSCJAG00000005671	RAVER1	88	76.662	Callithrix_jacchus
ENSSHAG00000008181	-	90	79.939	ENSCAFG00000017861	RAVER1	88	80.245	Canis_familiaris
ENSSHAG00000008181	-	90	79.939	ENSCAFG00020024449	RAVER1	90	80.245	Canis_lupus_dingo
ENSSHAG00000008181	-	90	71.829	ENSCHIG00000006718	RAVER1	90	73.599	Capra_hircus
ENSSHAG00000008181	-	90	75.819	ENSTSYG00000027107	RAVER1	99	76.589	Carlito_syrichta
ENSSHAG00000008181	-	90	74.742	ENSCAPG00000002269	RAVER1	100	74.742	Cavia_aperea
ENSSHAG00000008181	-	90	75.888	ENSCPOG00000001008	RAVER1	90	76.036	Cavia_porcellus
ENSSHAG00000008181	-	90	76.148	ENSCCAG00000031723	RAVER1	88	77.037	Cebus_capucinus
ENSSHAG00000008181	-	90	77.071	ENSCATG00000043863	RAVER1	88	77.515	Cercocebus_atys
ENSSHAG00000008181	-	90	74.779	ENSCLAG00000009336	RAVER1	90	75.074	Chinchilla_lanigera
ENSSHAG00000008181	-	90	77.071	ENSCSAG00000007317	RAVER1	75	77.515	Chlorocebus_sabaeus
ENSSHAG00000008181	-	90	67.521	ENSCPBG00000005349	-	91	67.236	Chrysemys_picta_bellii
ENSSHAG00000008181	-	90	76.923	ENSCANG00000008337	RAVER1	88	77.367	Colobus_angolensis_palliatus
ENSSHAG00000008181	-	90	74.521	ENSCGRG00001013260	-	90	75.258	Cricetulus_griseus_chok1gshd
ENSSHAG00000008181	-	90	74.521	ENSCGRG00000015138	-	90	75.258	Cricetulus_griseus_crigri
ENSSHAG00000008181	-	90	50.932	ENSCSEG00000021092	raver1	85	50.980	Cynoglossus_semilaevis
ENSSHAG00000008181	-	90	52.986	ENSCVAG00000013971	raver1	85	52.352	Cyprinodon_variegatus
ENSSHAG00000008181	-	90	53.394	ENSDARG00000052617	raver1	86	52.584	Danio_rerio
ENSSHAG00000008181	-	59	78.146	ENSDNOG00000035742	-	61	78.808	Dasypus_novemcinctus
ENSSHAG00000008181	-	90	68.696	ENSDORG00000010106	-	90	67.681	Dipodomys_ordii
ENSSHAG00000008181	-	68	65.586	ENSETEG00000008201	-	73	86.813	Echinops_telfairi
ENSSHAG00000008181	-	58	86.826	ENSEASG00005010544	-	75	86.826	Equus_asinus_asinus
ENSSHAG00000008181	-	90	75.148	ENSECAG00000024966	RAVER1	88	76.401	Equus_caballus
ENSSHAG00000008181	-	90	54.545	ENSELUG00000023287	raver1	85	54.308	Esox_lucius
ENSSHAG00000008181	-	90	75.775	ENSFCAG00000009435	RAVER1	88	76.254	Felis_catus
ENSSHAG00000008181	-	90	74.374	ENSFDAG00000015113	RAVER1	90	74.521	Fukomys_damarensis
ENSSHAG00000008181	-	90	53.916	ENSGMOG00000003649	raver1	90	53.313	Gadus_morhua
ENSSHAG00000008181	-	74	40.959	ENSGALG00000050608	-	51	42.887	Gallus_gallus
ENSSHAG00000008181	-	90	52.914	ENSGAFG00000015944	raver1	85	51.813	Gambusia_affinis
ENSSHAG00000008181	-	90	50.000	ENSGACG00000013818	raver1	91	49.927	Gasterosteus_aculeatus
ENSSHAG00000008181	-	81	81.250	ENSGAGG00000011748	-	89	79.819	Gopherus_agassizii
ENSSHAG00000008181	-	90	76.923	ENSGGOG00000006015	RAVER1	88	77.367	Gorilla_gorilla
ENSSHAG00000008181	-	89	53.605	ENSHBUG00000021210	raver1	85	52.711	Haplochromis_burtoni
ENSSHAG00000008181	-	90	74.446	ENSHGLG00000015460	RAVER1	90	75.037	Heterocephalus_glaber_female
ENSSHAG00000008181	-	90	74.446	ENSHGLG00100000812	RAVER1	90	75.037	Heterocephalus_glaber_male
ENSSHAG00000008181	-	90	53.478	ENSHCOG00000000449	raver1	83	53.893	Hippocampus_comes
ENSSHAG00000008181	-	90	53.506	ENSIPUG00000013153	raver1	85	53.474	Ictalurus_punctatus
ENSSHAG00000008181	-	90	76.148	ENSSTOG00000003241	RAVER1	90	76.593	Ictidomys_tridecemlineatus
ENSSHAG00000008181	-	90	75.811	ENSJJAG00000018219	-	90	75.811	Jaculus_jaculus
ENSSHAG00000008181	-	90	52.914	ENSKMAG00000017355	raver1	85	52.134	Kryptolebias_marmoratus
ENSSHAG00000008181	-	81	51.871	ENSLBEG00000008268	raver1	80	51.630	Labrus_bergylta
ENSSHAG00000008181	-	90	60.145	ENSLACG00000005809	-	99	60.781	Latimeria_chalumnae
ENSSHAG00000008181	-	90	56.996	ENSLOCG00000007500	raver1	87	56.848	Lepisosteus_oculatus
ENSSHAG00000008181	-	90	75.628	ENSLAFG00000003664	-	88	81.250	Loxodonta_africana
ENSSHAG00000008181	-	90	76.923	ENSMFAG00000037977	RAVER1	88	77.367	Macaca_fascicularis
ENSSHAG00000008181	-	90	77.071	ENSMMUG00000014897	RAVER1	88	77.515	Macaca_mulatta
ENSSHAG00000008181	-	90	77.071	ENSMNEG00000028390	RAVER1	88	77.515	Macaca_nemestrina
ENSSHAG00000008181	-	90	77.071	ENSMLEG00000041959	RAVER1	88	77.515	Mandrillus_leucophaeus
ENSSHAG00000008181	-	72	80.000	ENSMAMG00000012059	raver1	85	52.454	Mastacembelus_armatus
ENSSHAG00000008181	-	76	91.667	ENSMZEG00005019002	raver1	85	53.253	Maylandia_zebra
ENSSHAG00000008181	-	90	74.374	ENSMAUG00000017948	-	90	75.110	Mesocricetus_auratus
ENSSHAG00000008181	-	90	79.531	ENSMICG00000010326	RAVER1	90	79.531	Microcebus_murinus
ENSSHAG00000008181	-	90	74.816	ENSMOCG00000015553	-	90	75.552	Microtus_ochrogaster
ENSSHAG00000008181	-	90	51.846	ENSMMOG00000012093	raver1	85	51.920	Mola_mola
ENSSHAG00000008181	-	87	95.425	ENSMODG00000005584	-	80	95.114	Monodelphis_domestica
ENSSHAG00000008181	-	90	52.134	ENSMALG00000016569	raver1	85	51.750	Monopterus_albus
ENSSHAG00000008181	-	90	73.353	MGP_CAROLIEiJ_G0031860	-	90	74.231	Mus_caroli
ENSSHAG00000008181	-	90	73.353	ENSMUSG00000010205	Raver1	90	74.085	Mus_musculus
ENSSHAG00000008181	-	90	72.489	MGP_PahariEiJ_G0014726	-	90	74.236	Mus_pahari
ENSSHAG00000008181	-	90	73.206	MGP_SPRETEiJ_G0032984	-	90	73.939	Mus_spretus
ENSSHAG00000008181	-	90	76.254	ENSMPUG00000006712	RAVER1	88	76.549	Mustela_putorius_furo
ENSSHAG00000008181	-	90	76.805	ENSMLUG00000012328	RAVER1	90	78.714	Myotis_lucifugus
ENSSHAG00000008181	-	90	73.669	ENSNGAG00000001260	-	90	73.964	Nannospalax_galili
ENSSHAG00000008181	-	90	46.812	ENSNBRG00000010139	raver1	85	47.352	Neolamprologus_brichardi
ENSSHAG00000008181	-	90	76.775	ENSNLEG00000012181	RAVER1	88	77.219	Nomascus_leucogenys
ENSSHAG00000008181	-	90	87.632	ENSMEUG00000003281	-	100	87.632	Notamacropus_eugenii
ENSSHAG00000008181	-	90	74.080	ENSODEG00000016260	RAVER1	90	75.184	Octodon_degus
ENSSHAG00000008181	-	90	52.932	ENSONIG00000001559	raver1	93	52.870	Oreochromis_niloticus
ENSSHAG00000008181	-	90	70.833	ENSOCUG00000020918	RAVER1	90	69.701	Oryctolagus_cuniculus
ENSSHAG00000008181	-	90	51.446	ENSORLG00000005458	raver1	85	51.054	Oryzias_latipes
ENSSHAG00000008181	-	90	51.891	ENSORLG00020004392	raver1	85	51.355	Oryzias_latipes_hni
ENSSHAG00000008181	-	90	52.345	ENSORLG00015017222	raver1	85	51.958	Oryzias_latipes_hsok
ENSSHAG00000008181	-	59	87.755	ENSOMEG00000023956	raver1	60	87.755	Oryzias_melastigma
ENSSHAG00000008181	-	90	76.706	ENSOGAG00000011071	RAVER1	88	76.706	Otolemur_garnettii
ENSSHAG00000008181	-	90	71.787	ENSOARG00000015886	RAVER1	88	72.083	Ovis_aries
ENSSHAG00000008181	-	90	76.775	ENSPPAG00000002611	RAVER1	88	77.219	Pan_paniscus
ENSSHAG00000008181	-	90	76.254	ENSPPRG00000009912	RAVER1	88	76.549	Panthera_pardus
ENSSHAG00000008181	-	90	76.775	ENSPTRG00000010466	RAVER1	88	77.219	Pan_troglodytes
ENSSHAG00000008181	-	90	77.071	ENSPANG00000004122	RAVER1	88	77.515	Papio_anubis
ENSSHAG00000008181	-	90	74.853	ENSPEMG00000016411	-	90	75.588	Peromyscus_maniculatus_bairdii
ENSSHAG00000008181	-	90	93.808	ENSPCIG00000018695	-	90	93.808	Phascolarctos_cinereus
ENSSHAG00000008181	-	90	52.591	ENSPFOG00000007016	raver1	85	52.424	Poecilia_formosa
ENSSHAG00000008181	-	83	51.252	ENSPLAG00000020793	raver1	85	50.453	Poecilia_latipinna
ENSSHAG00000008181	-	90	53.621	ENSPMEG00000011220	raver1	85	53.282	Poecilia_mexicana
ENSSHAG00000008181	-	90	52.960	ENSPREG00000006864	raver1	84	52.426	Poecilia_reticulata
ENSSHAG00000008181	-	90	75.592	ENSPPYG00000010514	RAVER1	75	76.331	Pongo_abelii
ENSSHAG00000008181	-	90	75.588	ENSPCOG00000026605	RAVER1	88	75.735	Propithecus_coquereli
ENSSHAG00000008181	-	90	75.261	ENSPVAG00000003689	RAVER1	90	76.374	Pteropus_vampyrus
ENSSHAG00000008181	-	58	86.538	ENSPNYG00000013284	raver1	66	69.468	Pundamilia_nyererei
ENSSHAG00000008181	-	90	53.040	ENSPNAG00000015476	raver1	85	52.959	Pygocentrus_nattereri
ENSSHAG00000008181	-	90	74.231	ENSRNOG00000020710	Raver1	90	74.671	Rattus_norvegicus
ENSSHAG00000008181	-	90	79.877	ENSRBIG00000034702	RAVER1	88	80.338	Rhinopithecus_bieti
ENSSHAG00000008181	-	90	79.877	ENSRROG00000031186	RAVER1	88	80.338	Rhinopithecus_roxellana
ENSSHAG00000008181	-	90	79.969	ENSSBOG00000023423	RAVER1	88	80.586	Saimiri_boliviensis_boliviensis
ENSSHAG00000008181	-	90	50.463	ENSSMAG00000004546	raver1	85	50.912	Scophthalmus_maximus
ENSSHAG00000008181	-	90	51.772	ENSSDUG00000021063	raver1	85	52.527	Seriola_dumerili
ENSSHAG00000008181	-	90	51.529	ENSSLDG00000014505	raver1	85	52.527	Seriola_lalandi_dorsalis
ENSSHAG00000008181	-	90	54.037	ENSSPAG00000000688	raver1	85	52.968	Stegastes_partitus
ENSSHAG00000008181	-	90	80.031	ENSSSCG00000013650	-	90	80.492	Sus_scrofa
ENSSHAG00000008181	-	90	52.824	ENSTRUG00000025641	raver1	85	52.519	Takifugu_rubripes
ENSSHAG00000008181	-	90	75.816	ENSTTRG00000009552	RAVER1	90	77.151	Tursiops_truncatus
ENSSHAG00000008181	-	90	76.844	ENSUAMG00000020385	RAVER1	88	77.139	Ursus_americanus
ENSSHAG00000008181	-	90	79.632	ENSVVUG00000028976	RAVER1	88	79.939	Vulpes_vulpes
ENSSHAG00000008181	-	90	60.061	ENSXETG00000011622	raver1	89	60.061	Xenopus_tropicalis
ENSSHAG00000008181	-	90	52.599	ENSXCOG00000016368	raver1	85	51.598	Xiphophorus_couchianus
ENSSHAG00000008181	-	90	52.527	ENSXMAG00000000217	raver1	85	51.524	Xiphophorus_maculatus