EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000008260 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 6005 bases
Position: chrGL861666.1:399480-405484
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000009548	MMR_HSR1	PF01926.23	3.3e-23	1	3
ENSSHAP00000009548	MMR_HSR1	PF01926.23	3.3e-23	2	3
ENSSHAP00000009548	MMR_HSR1	PF01926.23	3.3e-23	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000009631	-	2004	-	ENSSHAP00000009548	668 (aa)	-	G3W293

Gene Model

Click here to download ENSSHAG00000008260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000008260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000008260	-	89	45.000	ENSSHAG00000000786	-	77	45.000
ENSSHAG00000008260	-	90	52.913	ENSSHAG00000010554	-	77	52.913
ENSSHAG00000008260	-	87	52.222	ENSSHAG00000011315	-	99	52.222
ENSSHAG00000008260	-	92	44.500	ENSSHAG00000008887	-	83	44.500
ENSSHAG00000008260	-	89	48.624	ENSSHAG00000000842	-	66	48.624
ENSSHAG00000008260	-	87	47.236	ENSSHAG00000000843	-	83	47.236
ENSSHAG00000008260	-	96	82.511	ENSSHAG00000000570	-	89	82.511
ENSSHAG00000008260	-	99	89.820	ENSSHAG00000005895	-	98	89.820
ENSSHAG00000008260	-	91	44.292	ENSSHAG00000000612	-	73	44.292
ENSSHAG00000008260	-	88	42.784	ENSSHAG00000009322	-	88	42.784

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000008260	-	98	44.512	ENSG00000171115	GIMAP8	96	44.512	Homo_sapiens
ENSSHAG00000008260	-	95	45.101	ENSAMEG00000002432	GIMAP8	95	45.101	Ailuropoda_melanoleuca
ENSSHAG00000008260	-	99	44.201	ENSANAG00000038300	GIMAP8	94	44.201	Aotus_nancymaae
ENSSHAG00000008260	-	95	42.879	ENSBTAG00000014402	GIMAP8	91	42.879	Bos_taurus
ENSSHAG00000008260	-	96	44.375	ENSCJAG00000010511	GIMAP8	95	44.375	Callithrix_jacchus
ENSSHAG00000008260	-	94	42.523	ENSCAFG00000004572	GIMAP8	97	42.523	Canis_familiaris
ENSSHAG00000008260	-	95	42.924	ENSCAFG00020006503	GIMAP8	99	42.924	Canis_lupus_dingo
ENSSHAG00000008260	-	94	41.433	ENSCHIG00000013015	-	95	41.433	Capra_hircus
ENSSHAG00000008260	-	93	41.121	ENSCHIG00000021733	-	99	41.121	Capra_hircus
ENSSHAG00000008260	-	93	48.387	ENSCHIG00000016726	-	91	48.387	Capra_hircus
ENSSHAG00000008260	-	99	44.144	ENSTSYG00000014287	GIMAP8	99	44.144	Carlito_syrichta
ENSSHAG00000008260	-	96	43.478	ENSCCAG00000022092	GIMAP8	95	43.478	Cebus_capucinus
ENSSHAG00000008260	-	99	43.202	ENSCATG00000013026	GIMAP8	97	43.202	Cercocebus_atys
ENSSHAG00000008260	-	99	43.202	ENSCSAG00000006880	GIMAP8	97	43.202	Chlorocebus_sabaeus
ENSSHAG00000008260	-	99	43.807	ENSCANG00000039247	GIMAP8	97	43.807	Colobus_angolensis_palliatus
ENSSHAG00000008260	-	95	40.000	ENSCGRG00001018061	Gimap8	96	40.212	Cricetulus_griseus_chok1gshd
ENSSHAG00000008260	-	95	40.000	ENSCGRG00000014281	Gimap8	96	40.212	Cricetulus_griseus_crigri
ENSSHAG00000008260	-	95	46.166	ENSEASG00005020627	GIMAP8	92	46.166	Equus_asinus_asinus
ENSSHAG00000008260	-	95	46.477	ENSECAG00000018802	GIMAP8	92	46.477	Equus_caballus
ENSSHAG00000008260	-	96	36.950	ENSEEUG00000000919	-	99	35.391	Erinaceus_europaeus
ENSSHAG00000008260	-	95	44.322	ENSFCAG00000011441	GIMAP8	96	44.322	Felis_catus
ENSSHAG00000008260	-	97	40.682	ENSFDAG00000007805	-	89	40.682	Fukomys_damarensis
ENSSHAG00000008260	-	98	44.360	ENSGGOG00000025687	GIMAP8	96	44.360	Gorilla_gorilla
ENSSHAG00000008260	-	95	43.730	ENSSTOG00000025007	GIMAP8	96	43.730	Ictidomys_tridecemlineatus
ENSSHAG00000008260	-	99	43.656	ENSMFAG00000002026	GIMAP8	97	43.656	Macaca_fascicularis
ENSSHAG00000008260	-	99	43.656	ENSMMUG00000022636	GIMAP8	97	43.656	Macaca_mulatta
ENSSHAG00000008260	-	99	43.656	ENSMNEG00000042139	GIMAP8	97	43.656	Macaca_nemestrina
ENSSHAG00000008260	-	98	41.860	ENSMLEG00000036169	GIMAP8	96	41.860	Mandrillus_leucophaeus
ENSSHAG00000008260	-	95	36.500	ENSMGAG00000001590	-	99	36.500	Meleagris_gallopavo
ENSSHAG00000008260	-	99	44.277	ENSMICG00000015448	GIMAP8	95	44.277	Microcebus_murinus
ENSSHAG00000008260	-	95	37.654	ENSMOCG00000005505	Gimap8	93	37.900	Microtus_ochrogaster
ENSSHAG00000008260	-	96	40.104	MGP_CAROLIEiJ_G0028347	Gimap8	93	40.104	Mus_caroli
ENSSHAG00000008260	-	96	40.063	ENSMUSG00000064262	Gimap8	95	40.063	Mus_musculus
ENSSHAG00000008260	-	99	38.416	MGP_PahariEiJ_G0022101	Gimap8	94	38.416	Mus_pahari
ENSSHAG00000008260	-	96	39.722	MGP_SPRETEiJ_G0029350	Gimap8	95	39.722	Mus_spretus
ENSSHAG00000008260	-	95	45.789	ENSMLUG00000012405	GIMAP8	97	45.789	Myotis_lucifugus
ENSSHAG00000008260	-	98	45.427	ENSNLEG00000003821	GIMAP8	96	45.427	Nomascus_leucogenys
ENSSHAG00000008260	-	95	56.358	ENSMEUG00000010750	-	96	56.358	Notamacropus_eugenii
ENSSHAG00000008260	-	87	30.936	ENSONIG00000005027	GIMAP8	91	30.936	Oreochromis_niloticus
ENSSHAG00000008260	-	95	44.094	ENSOCUG00000001150	GIMAP8	92	44.094	Oryctolagus_cuniculus
ENSSHAG00000008260	-	98	41.553	ENSOGAG00000030330	GIMAP8	97	41.553	Otolemur_garnettii
ENSSHAG00000008260	-	84	48.108	ENSOARG00000001131	-	80	48.108	Ovis_aries
ENSSHAG00000008260	-	95	38.272	ENSOARG00000001393	-	100	38.272	Ovis_aries
ENSSHAG00000008260	-	98	44.207	ENSPPAG00000038601	GIMAP8	96	44.207	Pan_paniscus
ENSSHAG00000008260	-	93	44.872	ENSPPRG00000020196	GIMAP8	94	44.872	Panthera_pardus
ENSSHAG00000008260	-	97	43.779	ENSPTIG00000009369	GIMAP8	98	43.779	Panthera_tigris_altaica
ENSSHAG00000008260	-	98	44.207	ENSPTRG00000019856	GIMAP8	96	44.207	Pan_troglodytes
ENSSHAG00000008260	-	98	44.207	ENSPTRG00000046210	-	96	44.207	Pan_troglodytes
ENSSHAG00000008260	-	99	43.202	ENSPANG00000008718	GIMAP8	97	43.202	Papio_anubis
ENSSHAG00000008260	-	94	41.757	ENSPEMG00000016086	Gimap8	90	41.757	Peromyscus_maniculatus_bairdii
ENSSHAG00000008260	-	99	43.788	ENSPPYG00000018169	GIMAP8	97	43.788	Pongo_abelii
ENSSHAG00000008260	-	99	44.260	ENSPCOG00000015779	GIMAP8	93	44.260	Propithecus_coquereli
ENSSHAG00000008260	-	98	44.211	ENSPVAG00000010750	GIMAP8	98	44.211	Pteropus_vampyrus
ENSSHAG00000008260	-	94	39.813	ENSRNOG00000020169	Gimap8	89	39.813	Rattus_norvegicus
ENSSHAG00000008260	-	99	43.807	ENSRBIG00000017674	GIMAP8	99	44.783	Rhinopithecus_bieti
ENSSHAG00000008260	-	99	43.807	ENSRROG00000040860	GIMAP8	97	43.807	Rhinopithecus_roxellana
ENSSHAG00000008260	-	96	44.118	ENSSBOG00000028699	GIMAP8	95	44.118	Saimiri_boliviensis_boliviensis
ENSSHAG00000008260	-	95	37.569	ENSSFOG00015007812	-	96	37.569	Scleropages_formosus
ENSSHAG00000008260	-	99	34.242	ENSSARG00000004013	-	98	34.242	Sorex_araneus
ENSSHAG00000008260	-	95	41.331	ENSSSCG00000016452	GIMAP8	93	41.390	Sus_scrofa
ENSSHAG00000008260	-	94	44.444	ENSTBEG00000009953	-	88	44.444	Tupaia_belangeri
ENSSHAG00000008260	-	96	46.073	ENSTTRG00000002323	GIMAP8	94	47.475	Tursiops_truncatus
ENSSHAG00000008260	-	95	45.242	ENSUAMG00000023316	GIMAP8	95	44.876	Ursus_americanus
ENSSHAG00000008260	-	95	45.268	ENSUMAG00000011031	GIMAP8	95	45.268	Ursus_maritimus
ENSSHAG00000008260	-	95	45.416	ENSVPAG00000007363	-	100	45.416	Vicugna_pacos
ENSSHAG00000008260	-	94	42.105	ENSVVUG00000009161	GIMAP8	96	42.105	Vulpes_vulpes