EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000008304 (Gene tree)
Gene ID: 100924995
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 14100 bases
Position: chrGL849684.1:405684-419783
Accession: 25898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000009597	PseudoU_synth_2	PF00849.22	9.4e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000009681	RPUSD4-201	3494	-	ENSSHAP00000009597	302 (aa)	-	G3W2E2

Gene Model

Click here to download ENSSHAG00000008304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000008304's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000008304	RPUSD4	64	30.392	ENSSHAG00000013500	RPUSD1	61	30.392

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000008304	RPUSD4	99	76.412	ENSG00000165526	RPUSD4	80	76.412	Homo_sapiens
ENSSHAG00000008304	RPUSD4	99	54.248	ENSAPOG00000011024	rpusd4	77	54.248	Acanthochromis_polyacanthus
ENSSHAG00000008304	RPUSD4	74	74.490	ENSAMEG00000005953	-	94	74.490	Ailuropoda_melanoleuca
ENSSHAG00000008304	RPUSD4	99	75.748	ENSAMEG00000000127	-	80	75.748	Ailuropoda_melanoleuca
ENSSHAG00000008304	RPUSD4	99	51.645	ENSACIG00000003533	rpusd4	89	51.645	Amphilophus_citrinellus
ENSSHAG00000008304	RPUSD4	99	54.248	ENSAOCG00000015409	rpusd4	76	54.248	Amphiprion_ocellaris
ENSSHAG00000008304	RPUSD4	99	54.575	ENSAPEG00000018935	rpusd4	76	54.575	Amphiprion_percula
ENSSHAG00000008304	RPUSD4	99	52.288	ENSATEG00000008059	rpusd4	76	52.288	Anabas_testudineus
ENSSHAG00000008304	RPUSD4	92	63.799	ENSAPLG00000013250	RPUSD4	99	62.373	Anas_platyrhynchos
ENSSHAG00000008304	RPUSD4	100	69.508	ENSACAG00000000189	RPUSD4	83	69.508	Anolis_carolinensis
ENSSHAG00000008304	RPUSD4	99	78.405	ENSANAG00000024050	RPUSD4	81	78.405	Aotus_nancymaae
ENSSHAG00000008304	RPUSD4	99	53.289	ENSACLG00000020996	rpusd4	78	53.289	Astatotilapia_calliptera
ENSSHAG00000008304	RPUSD4	99	52.632	ENSAMXG00000031479	rpusd4	86	52.632	Astyanax_mexicanus
ENSSHAG00000008304	RPUSD4	99	71.096	ENSBTAG00000020900	RPUSD4	80	71.096	Bos_taurus
ENSSHAG00000008304	RPUSD4	99	77.409	ENSCJAG00000042850	RPUSD4	76	77.409	Callithrix_jacchus
ENSSHAG00000008304	RPUSD4	99	75.415	ENSCAFG00000010488	RPUSD4	80	75.415	Canis_familiaris
ENSSHAG00000008304	RPUSD4	99	75.415	ENSCAFG00020010621	RPUSD4	80	75.415	Canis_lupus_dingo
ENSSHAG00000008304	RPUSD4	99	71.761	ENSCHIG00000009975	RPUSD4	80	71.761	Capra_hircus
ENSSHAG00000008304	RPUSD4	99	78.405	ENSTSYG00000008456	RPUSD4	80	78.405	Carlito_syrichta
ENSSHAG00000008304	RPUSD4	81	70.204	ENSCAPG00000006040	RPUSD4	95	70.204	Cavia_aperea
ENSSHAG00000008304	RPUSD4	99	74.751	ENSCPOG00000014971	RPUSD4	80	74.751	Cavia_porcellus
ENSSHAG00000008304	RPUSD4	99	79.070	ENSCCAG00000027838	RPUSD4	81	79.070	Cebus_capucinus
ENSSHAG00000008304	RPUSD4	99	75.748	ENSCATG00000041570	RPUSD4	80	75.748	Cercocebus_atys
ENSSHAG00000008304	RPUSD4	99	75.748	ENSCLAG00000016553	RPUSD4	80	75.748	Chinchilla_lanigera
ENSSHAG00000008304	RPUSD4	99	76.412	ENSCSAG00000002274	RPUSD4	80	76.412	Chlorocebus_sabaeus
ENSSHAG00000008304	RPUSD4	89	78.148	ENSCHOG00000010249	RPUSD4	95	78.148	Choloepus_hoffmanni
ENSSHAG00000008304	RPUSD4	94	70.526	ENSCPBG00000011175	RPUSD4	98	70.526	Chrysemys_picta_bellii
ENSSHAG00000008304	RPUSD4	89	42.806	ENSCSAVG00000000872	-	54	42.806	Ciona_savignyi
ENSSHAG00000008304	RPUSD4	99	75.748	ENSCANG00000039684	RPUSD4	80	75.748	Colobus_angolensis_palliatus
ENSSHAG00000008304	RPUSD4	99	75.415	ENSCGRG00001024141	Rpusd4	80	75.415	Cricetulus_griseus_chok1gshd
ENSSHAG00000008304	RPUSD4	99	75.415	ENSCGRG00000014415	Rpusd4	80	75.415	Cricetulus_griseus_crigri
ENSSHAG00000008304	RPUSD4	52	46.541	ENSCSEG00000006462	-	70	46.541	Cynoglossus_semilaevis
ENSSHAG00000008304	RPUSD4	99	54.455	ENSCVAG00000008761	rpusd4	77	54.455	Cyprinodon_variegatus
ENSSHAG00000008304	RPUSD4	99	54.785	ENSCVAG00000000392	rpusd4	85	54.785	Cyprinodon_variegatus
ENSSHAG00000008304	RPUSD4	100	50.820	ENSDARG00000012674	rpusd4	85	50.820	Danio_rerio
ENSSHAG00000008304	RPUSD4	99	72.757	ENSDNOG00000020026	RPUSD4	80	72.757	Dasypus_novemcinctus
ENSSHAG00000008304	RPUSD4	99	76.744	ENSDORG00000016717	Rpusd4	80	76.744	Dipodomys_ordii
ENSSHAG00000008304	RPUSD4	99	75.748	ENSETEG00000013953	RPUSD4	81	75.748	Echinops_telfairi
ENSSHAG00000008304	RPUSD4	99	76.080	ENSEASG00005022982	RPUSD4	80	76.080	Equus_asinus_asinus
ENSSHAG00000008304	RPUSD4	99	75.748	ENSECAG00000000557	RPUSD4	80	75.748	Equus_caballus
ENSSHAG00000008304	RPUSD4	77	72.727	ENSEEUG00000014036	RPUSD4	62	72.727	Erinaceus_europaeus
ENSSHAG00000008304	RPUSD4	99	56.766	ENSELUG00000008075	rpusd4	79	56.766	Esox_lucius
ENSSHAG00000008304	RPUSD4	99	75.083	ENSFCAG00000029789	RPUSD4	80	75.083	Felis_catus
ENSSHAG00000008304	RPUSD4	99	63.576	ENSFALG00000005171	RPUSD4	89	63.576	Ficedula_albicollis
ENSSHAG00000008304	RPUSD4	99	74.751	ENSFDAG00000014307	RPUSD4	81	74.751	Fukomys_damarensis
ENSSHAG00000008304	RPUSD4	99	54.125	ENSFHEG00000004329	rpusd4	78	54.125	Fundulus_heteroclitus
ENSSHAG00000008304	RPUSD4	97	52.685	ENSGMOG00000017726	rpusd4	89	52.685	Gadus_morhua
ENSSHAG00000008304	RPUSD4	92	65.950	ENSGALG00000024326	RPUSD4	84	63.667	Gallus_gallus
ENSSHAG00000008304	RPUSD4	97	51.007	ENSGAFG00000021559	rpusd4	76	51.007	Gambusia_affinis
ENSSHAG00000008304	RPUSD4	97	50.505	ENSGACG00000001657	rpusd4	97	48.929	Gasterosteus_aculeatus
ENSSHAG00000008304	RPUSD4	99	67.000	ENSGAGG00000000132	RPUSD4	83	67.000	Gopherus_agassizii
ENSSHAG00000008304	RPUSD4	99	76.412	ENSGGOG00000016494	RPUSD4	80	76.412	Gorilla_gorilla
ENSSHAG00000008304	RPUSD4	99	53.289	ENSHBUG00000022838	rpusd4	78	53.289	Haplochromis_burtoni
ENSSHAG00000008304	RPUSD4	99	74.751	ENSHGLG00000002285	RPUSD4	80	74.751	Heterocephalus_glaber_female
ENSSHAG00000008304	RPUSD4	99	74.751	ENSHGLG00100006385	RPUSD4	80	74.751	Heterocephalus_glaber_male
ENSSHAG00000008304	RPUSD4	99	54.605	ENSHCOG00000006612	rpusd4	77	54.605	Hippocampus_comes
ENSSHAG00000008304	RPUSD4	99	52.961	ENSIPUG00000023879	rusd4	78	52.961	Ictalurus_punctatus
ENSSHAG00000008304	RPUSD4	99	77.000	ENSSTOG00000025280	RPUSD4	83	77.000	Ictidomys_tridecemlineatus
ENSSHAG00000008304	RPUSD4	99	76.589	ENSJJAG00000018673	Rpusd4	81	76.589	Jaculus_jaculus
ENSSHAG00000008304	RPUSD4	99	54.785	ENSKMAG00000021805	rpusd4	78	54.785	Kryptolebias_marmoratus
ENSSHAG00000008304	RPUSD4	97	52.508	ENSLBEG00000020394	rpusd4	83	52.508	Labrus_bergylta
ENSSHAG00000008304	RPUSD4	98	65.101	ENSLACG00000011028	RPUSD4	75	65.101	Latimeria_chalumnae
ENSSHAG00000008304	RPUSD4	99	47.841	ENSLOCG00000003124	rpusd4	80	47.841	Lepisosteus_oculatus
ENSSHAG00000008304	RPUSD4	100	77.152	ENSLAFG00000005211	RPUSD4	100	66.552	Loxodonta_africana
ENSSHAG00000008304	RPUSD4	99	76.412	ENSMFAG00000039513	RPUSD4	80	76.412	Macaca_fascicularis
ENSSHAG00000008304	RPUSD4	99	76.080	ENSMMUG00000007933	RPUSD4	80	76.080	Macaca_mulatta
ENSSHAG00000008304	RPUSD4	99	76.412	ENSMNEG00000027414	RPUSD4	80	76.412	Macaca_nemestrina
ENSSHAG00000008304	RPUSD4	99	76.080	ENSMLEG00000042461	RPUSD4	80	76.080	Mandrillus_leucophaeus
ENSSHAG00000008304	RPUSD4	100	51.447	ENSMAMG00000023839	rpusd4	80	51.447	Mastacembelus_armatus
ENSSHAG00000008304	RPUSD4	99	53.289	ENSMZEG00005011999	rpusd4	78	53.289	Maylandia_zebra
ENSSHAG00000008304	RPUSD4	91	64.260	ENSMGAG00000000840	RPUSD4	92	61.667	Meleagris_gallopavo
ENSSHAG00000008304	RPUSD4	99	76.080	ENSMAUG00000010280	Rpusd4	80	76.080	Mesocricetus_auratus
ENSSHAG00000008304	RPUSD4	99	77.517	ENSMICG00000015979	RPUSD4	90	77.517	Microcebus_murinus
ENSSHAG00000008304	RPUSD4	98	74.662	ENSMOCG00000000661	Rpusd4	79	74.662	Microtus_ochrogaster
ENSSHAG00000008304	RPUSD4	97	54.515	ENSMMOG00000021731	rpusd4	88	54.515	Mola_mola
ENSSHAG00000008304	RPUSD4	94	87.324	ENSMODG00000004521	RPUSD4	73	87.324	Monodelphis_domestica
ENSSHAG00000008304	RPUSD4	99	52.614	ENSMALG00000005839	rpusd4	92	52.614	Monopterus_albus
ENSSHAG00000008304	RPUSD4	100	74.503	MGP_CAROLIEiJ_G0031954	Rpusd4	80	74.503	Mus_caroli
ENSSHAG00000008304	RPUSD4	100	73.510	ENSMUSG00000032044	Rpusd4	80	73.510	Mus_musculus
ENSSHAG00000008304	RPUSD4	100	74.172	MGP_PahariEiJ_G0014819	Rpusd4	80	74.172	Mus_pahari
ENSSHAG00000008304	RPUSD4	100	73.841	MGP_SPRETEiJ_G0033078	Rpusd4	80	73.841	Mus_spretus
ENSSHAG00000008304	RPUSD4	99	75.748	ENSMPUG00000006608	RPUSD4	80	75.748	Mustela_putorius_furo
ENSSHAG00000008304	RPUSD4	99	75.920	ENSMLUG00000017328	-	79	75.920	Myotis_lucifugus
ENSSHAG00000008304	RPUSD4	84	75.197	ENSMLUG00000029348	-	100	75.197	Myotis_lucifugus
ENSSHAG00000008304	RPUSD4	99	77.076	ENSNGAG00000020847	Rpusd4	80	77.076	Nannospalax_galili
ENSSHAG00000008304	RPUSD4	99	53.289	ENSNBRG00000005207	rpusd4	88	53.289	Neolamprologus_brichardi
ENSSHAG00000008304	RPUSD4	99	76.412	ENSNLEG00000007465	RPUSD4	80	76.412	Nomascus_leucogenys
ENSSHAG00000008304	RPUSD4	100	89.404	ENSMEUG00000004370	RPUSD4	81	89.404	Notamacropus_eugenii
ENSSHAG00000008304	RPUSD4	99	74.086	ENSODEG00000004577	RPUSD4	80	74.086	Octodon_degus
ENSSHAG00000008304	RPUSD4	99	53.947	ENSONIG00000018879	rpusd4	82	53.947	Oreochromis_niloticus
ENSSHAG00000008304	RPUSD4	96	69.831	ENSOANG00000007247	RPUSD4	95	69.697	Ornithorhynchus_anatinus
ENSSHAG00000008304	RPUSD4	100	77.228	ENSOCUG00000017039	RPUSD4	81	77.228	Oryctolagus_cuniculus
ENSSHAG00000008304	RPUSD4	96	50.338	ENSORLG00000002750	rpusd4	82	50.338	Oryzias_latipes
ENSSHAG00000008304	RPUSD4	96	50.676	ENSORLG00020002044	rpusd4	74	50.676	Oryzias_latipes_hni
ENSSHAG00000008304	RPUSD4	96	50.676	ENSORLG00015020034	rpusd4	74	50.676	Oryzias_latipes_hsok
ENSSHAG00000008304	RPUSD4	96	53.535	ENSOMEG00000004861	rpusd4	73	53.535	Oryzias_melastigma
ENSSHAG00000008304	RPUSD4	99	78.333	ENSOGAG00000008922	RPUSD4	79	78.333	Otolemur_garnettii
ENSSHAG00000008304	RPUSD4	99	72.093	ENSOARG00000012238	RPUSD4	79	72.093	Ovis_aries
ENSSHAG00000008304	RPUSD4	99	76.412	ENSPPAG00000042883	RPUSD4	74	76.412	Pan_paniscus
ENSSHAG00000008304	RPUSD4	99	75.415	ENSPPRG00000003081	RPUSD4	80	75.415	Panthera_pardus
ENSSHAG00000008304	RPUSD4	100	75.497	ENSPTIG00000012059	RPUSD4	87	75.497	Panthera_tigris_altaica
ENSSHAG00000008304	RPUSD4	99	76.412	ENSPTRG00000004454	RPUSD4	80	76.412	Pan_troglodytes
ENSSHAG00000008304	RPUSD4	99	75.748	ENSPANG00000015040	RPUSD4	80	75.748	Papio_anubis
ENSSHAG00000008304	RPUSD4	99	58.224	ENSPKIG00000023986	rpusd4	78	58.224	Paramormyrops_kingsleyae
ENSSHAG00000008304	RPUSD4	99	67.333	ENSPSIG00000014268	RPUSD4	95	67.333	Pelodiscus_sinensis
ENSSHAG00000008304	RPUSD4	99	49.673	ENSPMGG00000002806	rpusd4	85	49.508	Periophthalmus_magnuspinnatus
ENSSHAG00000008304	RPUSD4	99	67.442	ENSPEMG00000000278	Rpusd4	79	67.442	Peromyscus_maniculatus_bairdii
ENSSHAG00000008304	RPUSD4	99	42.515	ENSPMAG00000008183	rpusd4	97	42.515	Petromyzon_marinus
ENSSHAG00000008304	RPUSD4	100	91.060	ENSPCIG00000010212	RPUSD4	83	91.060	Phascolarctos_cinereus
ENSSHAG00000008304	RPUSD4	97	53.000	ENSPFOG00000019030	rpusd4	78	53.000	Poecilia_formosa
ENSSHAG00000008304	RPUSD4	97	53.691	ENSPLAG00000016848	rpusd4	75	53.691	Poecilia_latipinna
ENSSHAG00000008304	RPUSD4	97	53.020	ENSPMEG00000017534	rpusd4	75	53.020	Poecilia_mexicana
ENSSHAG00000008304	RPUSD4	93	52.613	ENSPREG00000005689	rpusd4	74	52.613	Poecilia_reticulata
ENSSHAG00000008304	RPUSD4	99	76.744	ENSPPYG00000004043	RPUSD4	80	76.744	Pongo_abelii
ENSSHAG00000008304	RPUSD4	77	71.348	ENSPCAG00000000753	RPUSD4	63	71.348	Procavia_capensis
ENSSHAG00000008304	RPUSD4	99	69.767	ENSPCOG00000020694	RPUSD4	80	69.767	Propithecus_coquereli
ENSSHAG00000008304	RPUSD4	99	77.076	ENSPVAG00000000988	RPUSD4	80	77.076	Pteropus_vampyrus
ENSSHAG00000008304	RPUSD4	99	52.961	ENSPNYG00000009652	rpusd4	78	52.961	Pundamilia_nyererei
ENSSHAG00000008304	RPUSD4	99	51.974	ENSPNAG00000012264	rpusd4	81	51.974	Pygocentrus_nattereri
ENSSHAG00000008304	RPUSD4	100	75.166	ENSRNOG00000011567	Rpusd4	80	75.166	Rattus_norvegicus
ENSSHAG00000008304	RPUSD4	99	77.181	ENSRBIG00000034842	RPUSD4	80	76.412	Rhinopithecus_bieti
ENSSHAG00000008304	RPUSD4	99	77.181	ENSRROG00000039753	RPUSD4	80	76.412	Rhinopithecus_roxellana
ENSSHAG00000008304	RPUSD4	99	78.073	ENSSBOG00000030413	RPUSD4	81	78.073	Saimiri_boliviensis_boliviensis
ENSSHAG00000008304	RPUSD4	99	58.746	ENSSFOG00015006203	rpusd4	82	58.882	Scleropages_formosus
ENSSHAG00000008304	RPUSD4	100	51.948	ENSSMAG00000020978	rpusd4	80	51.948	Scophthalmus_maximus
ENSSHAG00000008304	RPUSD4	97	50.836	ENSSDUG00000013399	rpusd4	79	50.836	Seriola_dumerili
ENSSHAG00000008304	RPUSD4	97	50.836	ENSSLDG00000023507	rpusd4	79	50.836	Seriola_lalandi_dorsalis
ENSSHAG00000008304	RPUSD4	99	68.667	ENSSPUG00000001401	RPUSD4	84	68.750	Sphenodon_punctatus
ENSSHAG00000008304	RPUSD4	100	55.049	ENSSPAG00000012163	rpusd4	78	55.049	Stegastes_partitus
ENSSHAG00000008304	RPUSD4	99	75.415	ENSSSCG00000015233	RPUSD4	80	75.415	Sus_scrofa
ENSSHAG00000008304	RPUSD4	99	64.667	ENSTGUG00000000773	RPUSD4	100	64.667	Taeniopygia_guttata
ENSSHAG00000008304	RPUSD4	100	51.792	ENSTRUG00000012283	rpusd4	79	51.792	Takifugu_rubripes
ENSSHAG00000008304	RPUSD4	98	50.993	ENSTNIG00000014676	rpusd4	77	50.993	Tetraodon_nigroviridis
ENSSHAG00000008304	RPUSD4	99	72.425	ENSTTRG00000001555	RPUSD4	80	72.425	Tursiops_truncatus
ENSSHAG00000008304	RPUSD4	99	75.748	ENSUMAG00000002219	RPUSD4	80	75.748	Ursus_maritimus
ENSSHAG00000008304	RPUSD4	67	75.862	ENSVPAG00000001066	RPUSD4	77	75.862	Vicugna_pacos
ENSSHAG00000008304	RPUSD4	99	75.083	ENSVVUG00000020101	RPUSD4	80	75.083	Vulpes_vulpes
ENSSHAG00000008304	RPUSD4	97	53.020	ENSXCOG00000004676	rpusd4	78	52.685	Xiphophorus_couchianus
ENSSHAG00000008304	RPUSD4	97	53.020	ENSXMAG00000023351	rpusd4	76	53.020	Xiphophorus_maculatus