EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000008386 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: LARK|RBM4A|ZCCHC21|ZCRB3A
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 6249 bases
Position: chrGL864912.1:414978-421226
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000009688	zf-CCHC	PF00098.23	1.1e-07	1	1
ENSSHAP00000009688	RRM_5	PF13893.6	1.7e-08	1	2
ENSSHAP00000009688	RRM_5	PF13893.6	1.7e-08	2	2
ENSSHAP00000009688	RRM_1	PF00076.22	7e-34	1	2
ENSSHAP00000009688	RRM_1	PF00076.22	7e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000009773	-	1041	-	ENSSHAP00000009688	346 (aa)	-	G3W2N3

Gene Model

Click here to download ENSSHAG00000008386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000008386's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000008386	-	50	35.398	ENSSHAG00000015970	-	81	35.398
ENSSHAG00000008386	-	98	85.816	ENSSHAG00000008133	-	99	86.170

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000008386	-	100	87.945	ENSG00000173933	RBM4	100	98.780	Homo_sapiens
ENSSHAG00000008386	-	99	63.388	ENSG00000248643	RBM14-RBM4	100	62.740	Homo_sapiens
ENSSHAG00000008386	-	100	87.222	ENSG00000173914	RBM4B	97	98.561	Homo_sapiens
ENSSHAG00000008386	-	100	88.333	ENSAMEG00000010906	RBM4B	100	88.333	Ailuropoda_melanoleuca
ENSSHAG00000008386	-	100	86.849	ENSAMEG00000010914	RBM4	100	87.123	Ailuropoda_melanoleuca
ENSSHAG00000008386	-	100	87.500	ENSANAG00000023478	RBM4B	97	98.561	Aotus_nancymaae
ENSSHAG00000008386	-	100	86.740	ENSBTAG00000031688	RBM4	100	87.017	Bos_taurus
ENSSHAG00000008386	-	100	87.500	ENSBTAG00000000423	RBM4B	100	87.778	Bos_taurus
ENSSHAG00000008386	-	100	86.944	ENSCJAG00000013666	RBM4B	97	98.561	Callithrix_jacchus
ENSSHAG00000008386	-	100	88.056	ENSCAFG00000012378	RBM4B	100	88.056	Canis_familiaris
ENSSHAG00000008386	-	100	86.849	ENSCAFG00000012388	RBM4	100	87.123	Canis_familiaris
ENSSHAG00000008386	-	100	86.849	ENSCAFG00020015515	RBM4	100	87.123	Canis_lupus_dingo
ENSSHAG00000008386	-	100	88.056	ENSCAFG00020015519	RBM4B	100	88.056	Canis_lupus_dingo
ENSSHAG00000008386	-	100	86.740	ENSCHIG00000020613	RBM4	100	87.017	Capra_hircus
ENSSHAG00000008386	-	100	87.778	ENSCHIG00000008907	RBM4B	100	88.056	Capra_hircus
ENSSHAG00000008386	-	64	78.390	ENSTSYG00000009580	RBM4B	96	78.814	Carlito_syrichta
ENSSHAG00000008386	-	100	87.778	ENSCAPG00000009570	RBM4B	100	88.056	Cavia_aperea
ENSSHAG00000008386	-	100	87.397	ENSCAPG00000016600	RBM4	97	99.275	Cavia_aperea
ENSSHAG00000008386	-	100	87.778	ENSCPOG00000013689	RBM4B	100	88.056	Cavia_porcellus
ENSSHAG00000008386	-	100	87.397	ENSCPOG00000013194	RBM4	97	99.275	Cavia_porcellus
ENSSHAG00000008386	-	100	87.222	ENSCCAG00000016501	RBM4B	97	98.561	Cebus_capucinus
ENSSHAG00000008386	-	57	71.717	ENSCCAG00000023319	-	98	71.717	Cebus_capucinus
ENSSHAG00000008386	-	100	87.222	ENSCATG00000035353	RBM4B	97	98.561	Cercocebus_atys
ENSSHAG00000008386	-	100	87.123	ENSCLAG00000014756	RBM4	97	99.275	Chinchilla_lanigera
ENSSHAG00000008386	-	100	88.301	ENSCLAG00000015287	RBM4B	100	88.579	Chinchilla_lanigera
ENSSHAG00000008386	-	100	87.222	ENSCSAG00000008361	RBM4B	100	87.500	Chlorocebus_sabaeus
ENSSHAG00000008386	-	100	88.611	ENSCHOG00000002892	RBM4B	100	88.889	Choloepus_hoffmanni
ENSSHAG00000008386	-	60	78.414	ENSCHOG00000009753	RBM14-RBM4	100	78.855	Choloepus_hoffmanni
ENSSHAG00000008386	-	100	72.178	ENSCPBG00000023800	-	100	72.105	Chrysemys_picta_bellii
ENSSHAG00000008386	-	100	87.222	ENSCANG00000021868	RBM4B	97	98.561	Colobus_angolensis_palliatus
ENSSHAG00000008386	-	100	87.500	ENSCGRG00001016609	-	97	99.275	Cricetulus_griseus_chok1gshd
ENSSHAG00000008386	-	100	86.592	ENSCGRG00001024693	Rbm4b	100	87.151	Cricetulus_griseus_chok1gshd
ENSSHAG00000008386	-	100	87.500	ENSCGRG00000010183	-	97	99.275	Cricetulus_griseus_crigri
ENSSHAG00000008386	-	100	86.592	ENSCGRG00000012112	Rbm4b	100	87.151	Cricetulus_griseus_crigri
ENSSHAG00000008386	-	100	87.465	ENSDNOG00000045639	-	100	87.744	Dasypus_novemcinctus
ENSSHAG00000008386	-	100	88.579	ENSDNOG00000019500	-	100	88.858	Dasypus_novemcinctus
ENSSHAG00000008386	-	100	86.301	ENSDNOG00000032390	RBM4	100	86.575	Dasypus_novemcinctus
ENSSHAG00000008386	-	100	87.052	ENSDORG00000004538	-	97	97.826	Dipodomys_ordii
ENSSHAG00000008386	-	100	87.395	ENSDORG00000029108	Rbm4b	100	87.675	Dipodomys_ordii
ENSSHAG00000008386	-	60	61.086	ENSETEG00000018142	-	100	61.538	Echinops_telfairi
ENSSHAG00000008386	-	100	87.812	ENSEASG00005005064	RBM4	100	88.089	Equus_asinus_asinus
ENSSHAG00000008386	-	100	87.778	ENSEASG00005005068	RBM4B	100	88.056	Equus_asinus_asinus
ENSSHAG00000008386	-	100	87.812	ENSECAG00000022940	RBM4	100	88.089	Equus_caballus
ENSSHAG00000008386	-	100	87.778	ENSECAG00000022987	RBM4B	100	88.056	Equus_caballus
ENSSHAG00000008386	-	100	85.753	ENSEEUG00000000058	RBM4B	100	86.575	Erinaceus_europaeus
ENSSHAG00000008386	-	100	86.849	ENSFCAG00000029651	RBM4	97	98.551	Felis_catus
ENSSHAG00000008386	-	100	88.333	ENSFCAG00000007394	RBM4B	97	98.561	Felis_catus
ENSSHAG00000008386	-	88	83.521	ENSFALG00000002073	-	100	67.209	Ficedula_albicollis
ENSSHAG00000008386	-	100	88.301	ENSFDAG00000015530	RBM4B	100	88.579	Fukomys_damarensis
ENSSHAG00000008386	-	100	87.945	ENSFDAG00000005447	RBM4	97	99.275	Fukomys_damarensis
ENSSHAG00000008386	-	100	73.067	ENSGALG00000037946	-	100	72.995	Gallus_gallus
ENSSHAG00000008386	-	100	73.037	ENSGAGG00000008553	-	100	72.441	Gopherus_agassizii
ENSSHAG00000008386	-	100	87.222	ENSGGOG00000011698	RBM4B	97	98.561	Gorilla_gorilla
ENSSHAG00000008386	-	78	56.782	ENSHGLG00000000117	-	95	66.763	Heterocephalus_glaber_female
ENSSHAG00000008386	-	100	87.671	ENSHGLG00000009991	RBM4	97	99.275	Heterocephalus_glaber_female
ENSSHAG00000008386	-	100	88.056	ENSHGLG00000016412	-	100	88.333	Heterocephalus_glaber_female
ENSSHAG00000008386	-	100	78.000	ENSHGLG00000002853	-	100	78.000	Heterocephalus_glaber_female
ENSSHAG00000008386	-	83	96.903	ENSHGLG00100003854	RBM4	97	99.275	Heterocephalus_glaber_male
ENSSHAG00000008386	-	95	79.580	ENSHGLG00100020033	-	99	79.580	Heterocephalus_glaber_male
ENSSHAG00000008386	-	100	88.301	ENSHGLG00100003978	-	100	88.579	Heterocephalus_glaber_male
ENSSHAG00000008386	-	100	87.123	ENSSTOG00000022811	RBM4	97	98.551	Ictidomys_tridecemlineatus
ENSSHAG00000008386	-	100	87.778	ENSSTOG00000011226	RBM4B	100	88.056	Ictidomys_tridecemlineatus
ENSSHAG00000008386	-	100	85.475	ENSJJAG00000020870	Rbm4b	100	85.754	Jaculus_jaculus
ENSSHAG00000008386	-	100	89.655	ENSLAFG00000028147	-	100	89.625	Loxodonta_africana
ENSSHAG00000008386	-	100	86.389	ENSLAFG00000002285	RBM4B	100	87.778	Loxodonta_africana
ENSSHAG00000008386	-	100	87.222	ENSMFAG00000033927	RBM4B	97	99.275	Macaca_fascicularis
ENSSHAG00000008386	-	100	87.222	ENSMNEG00000043371	RBM4B	97	98.561	Macaca_nemestrina
ENSSHAG00000008386	-	100	87.222	ENSMLEG00000028563	RBM4B	97	99.275	Mandrillus_leucophaeus
ENSSHAG00000008386	-	100	86.555	ENSMAUG00000017027	Rbm4b	100	86.835	Mesocricetus_auratus
ENSSHAG00000008386	-	100	87.778	ENSMICG00000003820	RBM4B	97	98.561	Microcebus_murinus
ENSSHAG00000008386	-	100	86.592	ENSMOCG00000001835	Rbm4b	100	86.872	Microtus_ochrogaster
ENSSHAG00000008386	-	100	89.373	ENSMODG00000008056	-	100	89.918	Monodelphis_domestica
ENSSHAG00000008386	-	100	87.430	MGP_CAROLIEiJ_G0022515	Rbm4b	100	87.709	Mus_caroli
ENSSHAG00000008386	-	99	63.260	MGP_CAROLIEiJ_G0022514	-	100	63.536	Mus_caroli
ENSSHAG00000008386	-	100	88.366	MGP_CAROLIEiJ_G0022516	-	97	99.275	Mus_caroli
ENSSHAG00000008386	-	100	87.812	ENSMUSG00000096370	Gm21992	100	88.089	Mus_musculus
ENSSHAG00000008386	-	100	87.812	ENSMUSG00000094936	Rbm4	100	99.419	Mus_musculus
ENSSHAG00000008386	-	100	87.151	ENSMUSG00000033760	Rbm4b	91	98.561	Mus_musculus
ENSSHAG00000008386	-	100	86.872	MGP_PahariEiJ_G0014012	Rbm4b	100	87.151	Mus_pahari
ENSSHAG00000008386	-	100	87.569	MGP_PahariEiJ_G0014013	-	97	99.275	Mus_pahari
ENSSHAG00000008386	-	100	87.569	MGP_PahariEiJ_G0014011	-	100	87.845	Mus_pahari
ENSSHAG00000008386	-	100	76.157	MGP_SPRETEiJ_G0023429	-	100	76.512	Mus_spretus
ENSSHAG00000008386	-	100	69.969	MGP_SPRETEiJ_G0023428	-	94	70.279	Mus_spretus
ENSSHAG00000008386	-	100	69.969	MGP_SPRETEiJ_G0023430	-	100	70.279	Mus_spretus
ENSSHAG00000008386	-	100	86.849	ENSMPUG00000003443	RBM4	100	87.123	Mustela_putorius_furo
ENSSHAG00000008386	-	100	88.611	ENSMPUG00000003450	RBM4B	100	88.611	Mustela_putorius_furo
ENSSHAG00000008386	-	99	85.359	ENSMLUG00000004076	RBM4	95	85.635	Myotis_lucifugus
ENSSHAG00000008386	-	100	90.028	ENSMLUG00000001290	RBM4B	100	90.028	Myotis_lucifugus
ENSSHAG00000008386	-	100	87.430	ENSNGAG00000016292	Rbm4b	100	87.709	Nannospalax_galili
ENSSHAG00000008386	-	100	86.944	ENSNLEG00000006213	RBM4B	97	98.561	Nomascus_leucogenys
ENSSHAG00000008386	-	100	87.945	ENSNLEG00000035021	RBM4	97	98.551	Nomascus_leucogenys
ENSSHAG00000008386	-	100	88.736	ENSMEUG00000001445	-	100	89.011	Notamacropus_eugenii
ENSSHAG00000008386	-	60	87.168	ENSMEUG00000005739	-	100	87.611	Notamacropus_eugenii
ENSSHAG00000008386	-	100	86.849	ENSOPRG00000009149	RBM4	100	87.123	Ochotona_princeps
ENSSHAG00000008386	-	100	87.778	ENSOPRG00000009158	RBM4B	100	88.056	Ochotona_princeps
ENSSHAG00000008386	-	100	87.778	ENSODEG00000017696	-	100	88.056	Octodon_degus
ENSSHAG00000008386	-	100	71.667	ENSODEG00000001866	-	100	72.222	Octodon_degus
ENSSHAG00000008386	-	100	90.778	ENSOANG00000011036	-	100	90.490	Ornithorhynchus_anatinus
ENSSHAG00000008386	-	100	81.197	ENSOANG00000003143	-	84	80.057	Ornithorhynchus_anatinus
ENSSHAG00000008386	-	100	91.354	ENSOCUG00000004731	RBM4	100	91.354	Oryctolagus_cuniculus
ENSSHAG00000008386	-	100	87.778	ENSOCUG00000006695	LARK	100	88.056	Oryctolagus_cuniculus
ENSSHAG00000008386	-	100	87.705	ENSOGAG00000015647	RBM4	100	86.849	Otolemur_garnettii
ENSSHAG00000008386	-	100	87.778	ENSOGAG00000015648	RBM4B	100	88.056	Otolemur_garnettii
ENSSHAG00000008386	-	100	85.635	ENSOARG00000007700	RBM4	100	85.912	Ovis_aries
ENSSHAG00000008386	-	100	87.088	ENSOARG00000007759	RBM4B	100	87.088	Ovis_aries
ENSSHAG00000008386	-	100	87.222	ENSPPAG00000015125	RBM4B	97	98.561	Pan_paniscus
ENSSHAG00000008386	-	100	88.611	ENSPPRG00000003388	RBM4B	97	98.561	Panthera_pardus
ENSSHAG00000008386	-	100	86.849	ENSPPRG00000003533	RBM4	97	98.551	Panthera_pardus
ENSSHAG00000008386	-	100	88.611	ENSPTIG00000015426	RBM4B	97	98.561	Panthera_tigris_altaica
ENSSHAG00000008386	-	100	79.834	ENSPTIG00000016180	RBM4	97	99.275	Panthera_tigris_altaica
ENSSHAG00000008386	-	100	87.222	ENSPTRG00000003935	RBM4B	97	98.561	Pan_troglodytes
ENSSHAG00000008386	-	100	87.222	ENSPANG00000020672	RBM4B	97	98.561	Papio_anubis
ENSSHAG00000008386	-	80	78.547	ENSPSIG00000003477	-	96	77.027	Pelodiscus_sinensis
ENSSHAG00000008386	-	100	73.387	ENSPSIG00000003430	-	100	73.315	Pelodiscus_sinensis
ENSSHAG00000008386	-	100	87.465	ENSPEMG00000009144	Rbm4b	100	87.744	Peromyscus_maniculatus_bairdii
ENSSHAG00000008386	-	100	87.222	ENSPPYG00000003010	RBM4B	100	87.500	Pongo_abelii
ENSSHAG00000008386	-	100	86.849	ENSPPYG00000003012	RBM4	100	86.264	Pongo_abelii
ENSSHAG00000008386	-	100	86.575	ENSPCAG00000003393	-	100	86.849	Procavia_capensis
ENSSHAG00000008386	-	100	87.500	ENSPCOG00000027885	RBM4B	97	98.561	Propithecus_coquereli
ENSSHAG00000008386	-	100	86.301	ENSPVAG00000010486	RBM4	100	86.575	Pteropus_vampyrus
ENSSHAG00000008386	-	100	88.056	ENSPVAG00000010487	RBM4B	100	88.333	Pteropus_vampyrus
ENSSHAG00000008386	-	100	87.709	ENSRNOG00000061795	Rbm4b	100	87.989	Rattus_norvegicus
ENSSHAG00000008386	-	100	86.849	ENSRNOG00000050741	Rbm4	97	99.275	Rattus_norvegicus
ENSSHAG00000008386	-	100	87.222	ENSRBIG00000019394	RBM4B	97	98.561	Rhinopithecus_bieti
ENSSHAG00000008386	-	100	87.222	ENSRROG00000032850	RBM4B	97	98.561	Rhinopithecus_roxellana
ENSSHAG00000008386	-	100	86.944	ENSSBOG00000034474	RBM4B	97	97.842	Saimiri_boliviensis_boliviensis
ENSSHAG00000008386	-	100	88.022	ENSSARG00000010710	RBM4B	100	88.301	Sorex_araneus
ENSSHAG00000008386	-	100	86.849	ENSSSCG00000032437	RBM4	100	87.123	Sus_scrofa
ENSSHAG00000008386	-	81	78.694	ENSTGUG00000016779	-	95	76.351	Taeniopygia_guttata
ENSSHAG00000008386	-	67	94.545	ENSTBEG00000003727	-	68	95.305	Tupaia_belangeri
ENSSHAG00000008386	-	100	87.989	ENSTBEG00000003748	RBM4B	100	88.268	Tupaia_belangeri
ENSSHAG00000008386	-	100	87.637	ENSTTRG00000011164	RBM4	100	87.912	Tursiops_truncatus
ENSSHAG00000008386	-	100	87.778	ENSTTRG00000011166	RBM4B	100	88.056	Tursiops_truncatus
ENSSHAG00000008386	-	100	86.849	ENSUAMG00000014882	RBM4	97	98.551	Ursus_americanus
ENSSHAG00000008386	-	100	88.611	ENSUAMG00000004745	RBM4B	100	88.611	Ursus_americanus
ENSSHAG00000008386	-	68	94.468	ENSUMAG00000011738	-	97	98.551	Ursus_maritimus
ENSSHAG00000008386	-	100	86.575	ENSVPAG00000001949	RBM4	100	86.849	Vicugna_pacos
ENSSHAG00000008386	-	100	87.778	ENSVPAG00000001950	RBM4B	100	88.056	Vicugna_pacos
ENSSHAG00000008386	-	100	88.056	ENSVVUG00000010619	RBM4B	100	88.056	Vulpes_vulpes
ENSSHAG00000008386	-	100	86.301	ENSVVUG00000010622	RBM4	100	86.575	Vulpes_vulpes