EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000008411 (Gene tree)
Gene ID: 100922024
Gene Symbol: -
Alias: -
Full Name: chromosome 2 C16orf91 homolog
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 131530 bases
Position: chrGL841555.1:418515-550044
Accession: 100922024
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000009717	zf-CCCH	PF00642.24	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000009803	-	720	-	ENSSHAP00000009718	239 (aa)	-	G3W2R3
ENSSHAT00000009802	-	2578	-	ENSSHAP00000009717	806 (aa)	-	G3W2R2
ENSSHAT00000009804	-	559	-	ENSSHAP00000009719	133 (aa)	XP_003762076	G3W2R4

Gene Model

Click here to download ENSSHAG00000008411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000008411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000008411	-	98	55.843	ENSSHAG00000017696	UNK	94	54.557

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000008411	-	95	79.379	ENSG00000059145	UNKL	96	80.403	Homo_sapiens
ENSSHAG00000008411	-	90	82.899	ENSAPOG00000023784	unkl	92	94.774	Acanthochromis_polyacanthus
ENSSHAG00000008411	-	81	94.774	ENSACIG00000023268	unkl	91	94.774	Amphilophus_citrinellus
ENSSHAG00000008411	-	90	82.609	ENSAOCG00000022845	unkl	92	94.425	Amphiprion_ocellaris
ENSSHAG00000008411	-	84	91.864	ENSAPEG00000011709	unkl	95	91.864	Amphiprion_percula
ENSSHAG00000008411	-	81	95.470	ENSATEG00000004328	unkl	92	95.470	Anabas_testudineus
ENSSHAG00000008411	-	83	92.308	ENSAPLG00000016186	-	98	71.539	Anas_platyrhynchos
ENSSHAG00000008411	-	99	65.409	ENSANAG00000021942	-	100	65.660	Aotus_nancymaae
ENSSHAG00000008411	-	82	94.425	ENSACLG00000006189	unkl	94	94.425	Astatotilapia_calliptera
ENSSHAG00000008411	-	99	75.310	ENSAMXG00000007890	unkl	97	89.423	Astyanax_mexicanus
ENSSHAG00000008411	-	99	62.390	ENSBTAG00000014126	-	96	67.044	Bos_taurus
ENSSHAG00000008411	-	97	75.504	ENSCJAG00000013151	-	96	86.644	Callithrix_jacchus
ENSSHAG00000008411	-	89	82.663	ENSCAFG00000019581	UNKL	97	65.912	Canis_familiaris
ENSSHAG00000008411	-	83	91.608	ENSCAFG00020001284	-	95	91.608	Canis_lupus_dingo
ENSSHAG00000008411	-	97	81.556	ENSTSYG00000033619	-	99	79.778	Carlito_syrichta
ENSSHAG00000008411	-	75	88.546	ENSCAPG00000014785	-	90	88.546	Cavia_aperea
ENSSHAG00000008411	-	93	78.814	ENSCPOG00000011846	-	96	79.827	Cavia_porcellus
ENSSHAG00000008411	-	99	67.421	ENSCCAG00000022808	-	96	84.830	Cebus_capucinus
ENSSHAG00000008411	-	98	79.096	ENSCATG00000033183	-	96	67.421	Cercocebus_atys
ENSSHAG00000008411	-	93	79.944	ENSCLAG00000015420	-	100	59.975	Chinchilla_lanigera
ENSSHAG00000008411	-	95	79.096	ENSCSAG00000011709	-	96	67.421	Chlorocebus_sabaeus
ENSSHAG00000008411	-	98	85.082	ENSCPBG00000002794	-	98	87.102	Chrysemys_picta_bellii
ENSSHAG00000008411	-	90	67.964	ENSCANG00000036315	-	100	77.978	Colobus_angolensis_palliatus
ENSSHAG00000008411	-	98	79.832	ENSCGRG00001014153	Unkl	96	70.189	Cricetulus_griseus_chok1gshd
ENSSHAG00000008411	-	98	79.832	ENSCGRG00000010384	Unkl	100	70.189	Cricetulus_griseus_crigri
ENSSHAG00000008411	-	83	95.122	ENSCSEG00000010415	unkl	94	86.239	Cynoglossus_semilaevis
ENSSHAG00000008411	-	82	91.304	ENSCVAG00000015910	unkl	95	88.291	Cyprinodon_variegatus
ENSSHAG00000008411	-	99	75.836	ENSDARG00000037838	unkl	97	75.746	Danio_rerio
ENSSHAG00000008411	-	81	90.000	ENSDORG00000015663	Unkl	91	90.000	Dipodomys_ordii
ENSSHAG00000008411	-	88	87.129	ENSEASG00005000274	-	96	87.129	Equus_asinus_asinus
ENSSHAG00000008411	-	89	82.698	ENSECAG00000010641	UNKL	96	82.698	Equus_caballus
ENSSHAG00000008411	-	82	95.122	ENSELUG00000021446	unkl	93	95.122	Esox_lucius
ENSSHAG00000008411	-	94	77.143	ENSFCAG00000010643	-	95	53.640	Felis_catus
ENSSHAG00000008411	-	82	93.197	ENSFHEG00000002811	unkl	97	90.032	Fundulus_heteroclitus
ENSSHAG00000008411	-	99	76.352	ENSGALG00000043765	-	96	83.852	Gallus_gallus
ENSSHAG00000008411	-	90	82.319	ENSGAFG00000017960	unkl	94	85.933	Gambusia_affinis
ENSSHAG00000008411	-	98	84.956	ENSGAGG00000023664	-	95	86.646	Gopherus_agassizii
ENSSHAG00000008411	-	99	67.673	ENSGGOG00000014915	-	96	67.296	Gorilla_gorilla
ENSSHAG00000008411	-	82	94.425	ENSHBUG00000003486	unkl	94	94.425	Haplochromis_burtoni
ENSSHAG00000008411	-	99	59.108	ENSHGLG00000001586	-	97	59.232	Heterocephalus_glaber_female
ENSSHAG00000008411	-	99	59.232	ENSHGLG00100007463	-	100	59.356	Heterocephalus_glaber_male
ENSSHAG00000008411	-	95	83.929	ENSHCOG00000015734	unkl	97	87.975	Hippocampus_comes
ENSSHAG00000008411	-	89	85.207	ENSIPUG00000019510	unkl	97	87.156	Ictalurus_punctatus
ENSSHAG00000008411	-	96	82.301	ENSSTOG00000003487	-	100	82.301	Ictidomys_tridecemlineatus
ENSSHAG00000008411	-	83	89.037	ENSJJAG00000011047	Unkl	96	89.037	Jaculus_jaculus
ENSSHAG00000008411	-	82	94.406	ENSKMAG00000018810	unkl	94	94.406	Kryptolebias_marmoratus
ENSSHAG00000008411	-	88	80.000	ENSLBEG00000023912	unkl	92	91.289	Labrus_bergylta
ENSSHAG00000008411	-	89	67.746	ENSLACG00000009285	unkl	100	67.746	Latimeria_chalumnae
ENSSHAG00000008411	-	99	76.149	ENSLOCG00000003648	unkl	93	87.975	Lepisosteus_oculatus
ENSSHAG00000008411	-	99	62.236	ENSLAFG00000018262	-	96	81.556	Loxodonta_africana
ENSSHAG00000008411	-	95	79.096	ENSMFAG00000000632	-	96	80.115	Macaca_fascicularis
ENSSHAG00000008411	-	95	79.096	ENSMMUG00000012440	-	96	80.115	Macaca_mulatta
ENSSHAG00000008411	-	95	70.670	ENSMNEG00000036131	-	96	63.454	Macaca_nemestrina
ENSSHAG00000008411	-	95	78.814	ENSMLEG00000037946	-	100	58.616	Mandrillus_leucophaeus
ENSSHAG00000008411	-	83	94.425	ENSMAMG00000002709	unkl	97	92.150	Mastacembelus_armatus
ENSSHAG00000008411	-	82	94.425	ENSMZEG00005022469	unkl	94	94.425	Maylandia_zebra
ENSSHAG00000008411	-	98	75.743	ENSMGAG00000006920	UNKL	99	75.990	Meleagris_gallopavo
ENSSHAG00000008411	-	98	79.552	ENSMAUG00000016281	Unkl	96	70.314	Mesocricetus_auratus
ENSSHAG00000008411	-	99	62.264	ENSMICG00000007141	-	92	78.746	Microcebus_murinus
ENSSHAG00000008411	-	89	85.759	ENSMOCG00000011424	Unkl	96	70.440	Microtus_ochrogaster
ENSSHAG00000008411	-	88	83.728	ENSMMOG00000014848	unkl	93	94.774	Mola_mola
ENSSHAG00000008411	-	90	94.483	ENSMODG00000016188	-	94	94.483	Monodelphis_domestica
ENSSHAG00000008411	-	99	71.482	ENSMALG00000020837	unkl	97	72.795	Monopterus_albus
ENSSHAG00000008411	-	89	83.901	MGP_CAROLIEiJ_G0021225	Unkl	96	69.686	Mus_caroli
ENSSHAG00000008411	-	89	83.901	ENSMUSG00000015127	Unkl	96	69.560	Mus_musculus
ENSSHAG00000008411	-	89	84.520	MGP_PahariEiJ_G0023543	Unkl	96	69.686	Mus_pahari
ENSSHAG00000008411	-	89	83.901	MGP_SPRETEiJ_G0022136	Unkl	96	69.560	Mus_spretus
ENSSHAG00000008411	-	81	78.626	ENSMPUG00000015653	-	98	78.707	Mustela_putorius_furo
ENSSHAG00000008411	-	89	65.940	ENSMLUG00000011207	-	100	65.757	Myotis_lucifugus
ENSSHAG00000008411	-	89	86.378	ENSNGAG00000002821	Unkl	96	70.943	Nannospalax_galili
ENSSHAG00000008411	-	78	94.425	ENSNBRG00000015104	unkl	90	94.425	Neolamprologus_brichardi
ENSSHAG00000008411	-	98	78.977	ENSNLEG00000008624	-	98	67.718	Nomascus_leucogenys
ENSSHAG00000008411	-	91	81.525	ENSODEG00000017747	-	96	81.525	Octodon_degus
ENSSHAG00000008411	-	99	70.416	ENSONIG00000001411	unkl	98	71.271	Oreochromis_niloticus
ENSSHAG00000008411	-	87	87.227	ENSORLG00000005070	unkl	97	83.668	Oryzias_latipes
ENSSHAG00000008411	-	87	87.227	ENSORLG00020005376	unkl	97	83.668	Oryzias_latipes_hni
ENSSHAG00000008411	-	87	86.916	ENSORLG00015018545	unkl	97	83.381	Oryzias_latipes_hsok
ENSSHAG00000008411	-	85	92.177	ENSOMEG00000023985	unkl	95	92.177	Oryzias_melastigma
ENSSHAG00000008411	-	86	76.408	ENSPPAG00000043365	-	100	77.617	Pan_paniscus
ENSSHAG00000008411	-	94	77.143	ENSPPRG00000018472	-	98	53.017	Panthera_pardus
ENSSHAG00000008411	-	67	90.210	ENSPTIG00000000863	-	87	88.660	Panthera_tigris_altaica
ENSSHAG00000008411	-	95	79.379	ENSPTRG00000007591	UNKL	96	80.403	Pan_troglodytes
ENSSHAG00000008411	-	95	78.814	ENSPANG00000015754	-	96	67.547	Papio_anubis
ENSSHAG00000008411	-	86	84.568	ENSPKIG00000006764	-	100	77.070	Paramormyrops_kingsleyae
ENSSHAG00000008411	-	99	73.416	ENSPKIG00000002101	unkl	97	75.758	Paramormyrops_kingsleyae
ENSSHAG00000008411	-	64	77.864	ENSPSIG00000011268	-	100	77.083	Pelodiscus_sinensis
ENSSHAG00000008411	-	85	91.919	ENSPMGG00000020856	unkl	94	91.919	Periophthalmus_magnuspinnatus
ENSSHAG00000008411	-	99	59.480	ENSPEMG00000008937	Unkl	96	69.308	Peromyscus_maniculatus_bairdii
ENSSHAG00000008411	-	99	98.491	ENSPCIG00000015633	-	99	97.541	Phascolarctos_cinereus
ENSSHAG00000008411	-	99	71.108	ENSPFOG00000010836	unkl	97	72.908	Poecilia_formosa
ENSSHAG00000008411	-	88	83.285	ENSPLAG00000002294	unkl	93	85.933	Poecilia_latipinna
ENSSHAG00000008411	-	99	71.322	ENSPMEG00000019000	unkl	93	85.933	Poecilia_mexicana
ENSSHAG00000008411	-	82	93.728	ENSPREG00000007918	unkl	97	85.627	Poecilia_reticulata
ENSSHAG00000008411	-	88	75.424	ENSPPYG00000006950	-	99	76.369	Pongo_abelii
ENSSHAG00000008411	-	92	78.674	ENSPCOG00000017889	-	96	78.674	Propithecus_coquereli
ENSSHAG00000008411	-	81	94.774	ENSPNYG00000008111	unkl	95	94.774	Pundamilia_nyererei
ENSSHAG00000008411	-	94	83.714	ENSPNAG00000010422	unkl	97	91.290	Pygocentrus_nattereri
ENSSHAG00000008411	-	89	84.520	ENSRNOG00000054605	Unkl	96	70.189	Rattus_norvegicus
ENSSHAG00000008411	-	99	58.875	ENSRBIG00000040235	-	96	58.625	Rhinopithecus_bieti
ENSSHAG00000008411	-	95	79.096	ENSRROG00000029341	-	100	67.547	Rhinopithecus_roxellana
ENSSHAG00000008411	-	99	67.044	ENSSBOG00000031173	-	100	66.918	Saimiri_boliviensis_boliviensis
ENSSHAG00000008411	-	91	66.711	ENSSFOG00015018904	unkl	94	65.101	Scleropages_formosus
ENSSHAG00000008411	-	86	86.239	ENSSMAG00000005106	unkl	97	90.032	Scophthalmus_maximus
ENSSHAG00000008411	-	99	71.975	ENSSDUG00000019045	unkl	94	86.239	Seriola_dumerili
ENSSHAG00000008411	-	90	82.899	ENSSLDG00000010672	unkl	94	86.239	Seriola_lalandi_dorsalis
ENSSHAG00000008411	-	92	84.832	ENSSPUG00000009763	-	96	86.798	Sphenodon_punctatus
ENSSHAG00000008411	-	99	72.852	ENSSPAG00000017109	unkl	91	94.774	Stegastes_partitus
ENSSHAG00000008411	-	99	68.679	ENSSSCG00000022963	-	97	73.552	Sus_scrofa
ENSSHAG00000008411	-	89	82.799	ENSTRUG00000012086	unkl	94	85.015	Takifugu_rubripes
ENSSHAG00000008411	-	99	67.120	ENSTNIG00000018588	unkl	98	67.738	Tetraodon_nigroviridis
ENSSHAG00000008411	-	65	88.550	ENSVVUG00000011182	-	80	88.550	Vulpes_vulpes
ENSSHAG00000008411	-	99	74.439	ENSXETG00000021599	unkl	97	74.439	Xenopus_tropicalis
ENSSHAG00000008411	-	88	82.029	ENSXCOG00000016491	unkl	93	85.933	Xiphophorus_couchianus
ENSSHAG00000008411	-	88	82.029	ENSXMAG00000009520	unkl	93	85.933	Xiphophorus_maculatus