EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000008417 (Gene tree)
Gene ID: 100926213
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 18197 bases
Position: chrGL849667.1:419794-437990
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000009727	ResIII	PF04851.15	1.6e-11	1	1
ENSSHAP00000009727	DEAD	PF00270.29	4.3e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000009812	-	1044	-	ENSSHAP00000009727	348 (aa)	-	G3W2S2

Gene Model

Click here to download ENSSHAG00000008417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000008417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000008417	-	98	33.062	ENSSHAG00000007623	-	53	33.062
ENSSHAG00000008417	-	96	47.761	ENSSHAG00000018781	DDX18	52	47.761
ENSSHAG00000008417	-	93	36.228	ENSSHAG00000004578	DDX17	52	36.119
ENSSHAG00000008417	-	66	30.172	ENSSHAG00000008169	-	61	30.172
ENSSHAG00000008417	-	99	31.700	ENSSHAG00000001847	-	54	31.700
ENSSHAG00000008417	-	98	32.386	ENSSHAG00000011574	-	56	32.386
ENSSHAG00000008417	-	91	35.215	ENSSHAG00000018804	DDX31	51	35.215
ENSSHAG00000008417	-	99	36.782	ENSSHAG00000010825	DDX47	66	36.782
ENSSHAG00000008417	-	98	30.172	ENSSHAG00000015756	EIF4A1	84	30.312
ENSSHAG00000008417	-	98	35.143	ENSSHAG00000012772	DDX5	50	35.143
ENSSHAG00000008417	-	98	33.043	ENSSHAG00000016933	-	59	33.043
ENSSHAG00000008417	-	97	33.238	ENSSHAG00000014005	-	56	33.238
ENSSHAG00000008417	-	90	42.727	ENSSHAG00000015820	DDX55	58	42.727
ENSSHAG00000008417	-	97	34.795	ENSSHAG00000011424	DDX6	69	34.795
ENSSHAG00000008417	-	98	33.524	ENSSHAG00000010982	DDX49	62	35.890
ENSSHAG00000008417	-	93	31.818	ENSSHAG00000014781	DDX59	52	31.818
ENSSHAG00000008417	-	86	30.033	ENSSHAG00000017081	EIF4A2	88	30.195
ENSSHAG00000008417	-	97	30.347	ENSSHAG00000013962	DDX52	55	30.347

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000008417	-	100	93.391	ENSG00000178105	DDX10	51	93.391	Homo_sapiens
ENSSHAG00000008417	-	100	94.540	ENSAMEG00000009232	DDX10	53	94.524	Ailuropoda_melanoleuca
ENSSHAG00000008417	-	100	94.253	ENSCATG00000028487	DDX10	50	94.253	Cercocebus_atys
ENSSHAG00000008417	-	100	88.506	ENSCPBG00000021681	DDX10	52	88.506	Chrysemys_picta_bellii
ENSSHAG00000008417	-	99	64.140	ENSCSAVG00000003023	-	61	64.140	Ciona_savignyi
ENSSHAG00000008417	-	99	89.914	ENSDNOG00000012542	DDX10	52	89.914	Dasypus_novemcinctus
ENSSHAG00000008417	-	100	77.011	ENSEBUG00000007794	ddx10	54	76.945	Eptatretus_burgeri
ENSSHAG00000008417	-	98	90.323	ENSGGOG00000043387	-	56	90.323	Gorilla_gorilla
ENSSHAG00000008417	-	100	93.103	ENSHGLG00100003298	DDX10	50	93.103	Heterocephalus_glaber_male
ENSSHAG00000008417	-	96	48.358	ENSIPUG00000012876	ddx18	57	48.358	Ictalurus_punctatus
ENSSHAG00000008417	-	100	94.253	ENSSTOG00000005213	DDX10	54	94.479	Ictidomys_tridecemlineatus
ENSSHAG00000008417	-	100	93.103	ENSLAFG00000005951	DDX10	54	92.308	Loxodonta_africana
ENSSHAG00000008417	-	100	94.253	ENSMLEG00000044081	DDX10	50	94.253	Mandrillus_leucophaeus
ENSSHAG00000008417	-	100	89.655	ENSMGAG00000015145	DDX10	59	89.655	Meleagris_gallopavo
ENSSHAG00000008417	-	100	89.368	ENSMLUG00000001645	DDX10	52	89.368	Myotis_lucifugus
ENSSHAG00000008417	-	100	92.529	ENSOANG00000006243	DDX10	54	92.529	Ornithorhynchus_anatinus
ENSSHAG00000008417	-	100	93.410	ENSOGAG00000010962	DDX10	53	93.410	Otolemur_garnettii
ENSSHAG00000008417	-	100	93.410	ENSOARG00000012714	DDX10	52	93.410	Ovis_aries
ENSSHAG00000008417	-	100	93.966	ENSPANG00000015325	DDX10	50	93.966	Papio_anubis
ENSSHAG00000008417	-	100	89.368	ENSPSIG00000014874	DDX10	61	89.368	Pelodiscus_sinensis
ENSSHAG00000008417	-	100	96.839	ENSPCIG00000003013	DDX10	74	96.839	Phascolarctos_cinereus
ENSSHAG00000008417	-	99	94.524	ENSRBIG00000040612	DDX10	51	94.493	Rhinopithecus_bieti
ENSSHAG00000008417	-	100	93.966	ENSSBOG00000022735	DDX10	51	93.966	Saimiri_boliviensis_boliviensis
ENSSHAG00000008417	-	99	84.438	ENSSPAG00000015548	ddx10	57	84.438	Stegastes_partitus
ENSSHAG00000008417	-	100	94.253	ENSUAMG00000014176	DDX10	69	94.253	Ursus_americanus
ENSSHAG00000008417	-	100	84.770	ENSXETG00000014458	ddx10	51	84.770	Xenopus_tropicalis