EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000008464 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 41101 bases
Position: chrGL864824.1:425347-466447
Accession: 11101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000009779	ResIII	PF04851.15	2.2e-11	1	1
ENSSHAP00000009779	DEAD	PF00270.29	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000009865	SMARCA5-201	5711	-	ENSSHAP00000009779	993 (aa)	-	G3W2X4

Gene Model

Click here to download ENSSHAG00000008464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000008464's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000008464	SMARCA5	57	42.683	ENSSHAG00000017395	CHD1L	62	42.683
ENSSHAG00000008464	SMARCA5	98	81.977	ENSSHAG00000013518	SMARCA1	99	81.977
ENSSHAG00000008464	SMARCA5	51	47.200	ENSSHAG00000014358	HELLS	65	47.200

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000008464	SMARCA5	100	98.892	ENSG00000153147	SMARCA5	94	98.892	Homo_sapiens
ENSSHAG00000008464	SMARCA5	100	99.194	ENSAMEG00000009585	SMARCA5	94	99.194	Ailuropoda_melanoleuca
ENSSHAG00000008464	SMARCA5	97	97.433	ENSAPLG00000009206	SMARCA5	100	97.433	Anas_platyrhynchos
ENSSHAG00000008464	SMARCA5	100	97.082	ENSACAG00000003038	SMARCA5	96	97.082	Anolis_carolinensis
ENSSHAG00000008464	SMARCA5	100	98.892	ENSANAG00000019345	SMARCA5	99	98.892	Aotus_nancymaae
ENSSHAG00000008464	SMARCA5	100	99.094	ENSBTAG00000003399	SMARCA5	94	99.094	Bos_taurus
ENSSHAG00000008464	SMARCA5	100	98.993	ENSCJAG00000002735	SMARCA5	94	98.993	Callithrix_jacchus
ENSSHAG00000008464	SMARCA5	100	99.194	ENSCAFG00000007525	SMARCA5	94	99.194	Canis_familiaris
ENSSHAG00000008464	SMARCA5	98	99.178	ENSCAFG00020025641	SMARCA5	93	99.178	Canis_lupus_dingo
ENSSHAG00000008464	SMARCA5	100	99.094	ENSCHIG00000013730	-	94	99.094	Capra_hircus
ENSSHAG00000008464	SMARCA5	100	97.382	ENSCHIG00000016375	-	95	97.554	Capra_hircus
ENSSHAG00000008464	SMARCA5	100	98.993	ENSTSYG00000009954	SMARCA5	99	99.193	Carlito_syrichta
ENSSHAG00000008464	SMARCA5	97	98.657	ENSCAPG00000013747	SMARCA5	95	98.657	Cavia_aperea
ENSSHAG00000008464	SMARCA5	100	98.892	ENSCPOG00000002259	SMARCA5	94	98.892	Cavia_porcellus
ENSSHAG00000008464	SMARCA5	100	98.993	ENSCCAG00000027215	SMARCA5	99	98.993	Cebus_capucinus
ENSSHAG00000008464	SMARCA5	100	98.993	ENSCATG00000044917	SMARCA5	94	98.993	Cercocebus_atys
ENSSHAG00000008464	SMARCA5	100	98.892	ENSCLAG00000006153	SMARCA5	100	98.892	Chinchilla_lanigera
ENSSHAG00000008464	SMARCA5	98	99.071	ENSCSAG00000003448	SMARCA5	100	99.071	Chlorocebus_sabaeus
ENSSHAG00000008464	SMARCA5	91	98.064	ENSCHOG00000011724	SMARCA5	86	98.064	Choloepus_hoffmanni
ENSSHAG00000008464	SMARCA5	100	98.793	ENSCPBG00000027535	SMARCA5	96	98.793	Chrysemys_picta_bellii
ENSSHAG00000008464	SMARCA5	100	98.993	ENSCANG00000041629	SMARCA5	94	98.993	Colobus_angolensis_palliatus
ENSSHAG00000008464	SMARCA5	100	99.094	ENSCGRG00001012719	Smarca5	94	99.094	Cricetulus_griseus_chok1gshd
ENSSHAG00000008464	SMARCA5	100	99.094	ENSCGRG00000001417	Smarca5	99	98.993	Cricetulus_griseus_crigri
ENSSHAG00000008464	SMARCA5	100	96.375	ENSDNOG00000009158	SMARCA5	94	96.375	Dasypus_novemcinctus
ENSSHAG00000008464	SMARCA5	95	90.506	ENSDORG00000003466	Smarca5	97	90.506	Dipodomys_ordii
ENSSHAG00000008464	SMARCA5	97	85.640	ENSEBUG00000014773	SMARCA5	96	85.640	Eptatretus_burgeri
ENSSHAG00000008464	SMARCA5	100	99.194	ENSEASG00005001866	SMARCA5	98	99.152	Equus_asinus_asinus
ENSSHAG00000008464	SMARCA5	100	99.194	ENSECAG00000002676	SMARCA5	94	99.194	Equus_caballus
ENSSHAG00000008464	SMARCA5	100	94.663	ENSEEUG00000013176	SMARCA5	100	94.663	Erinaceus_europaeus
ENSSHAG00000008464	SMARCA5	97	89.381	ENSELUG00000014653	SMARCA5	99	89.381	Esox_lucius
ENSSHAG00000008464	SMARCA5	100	99.194	ENSFCAG00000004544	SMARCA5	94	99.194	Felis_catus
ENSSHAG00000008464	SMARCA5	98	97.835	ENSFALG00000004987	SMARCA5	100	97.835	Ficedula_albicollis
ENSSHAG00000008464	SMARCA5	100	99.094	ENSFDAG00000021016	SMARCA5	100	99.094	Fukomys_damarensis
ENSSHAG00000008464	SMARCA5	98	89.662	ENSGMOG00000007519	SMARCA5	94	89.662	Gadus_morhua
ENSSHAG00000008464	SMARCA5	99	98.286	ENSGALG00000009913	SMARCA5	96	98.286	Gallus_gallus
ENSSHAG00000008464	SMARCA5	98	90.788	ENSGACG00000017238	SMARCA5	95	90.788	Gasterosteus_aculeatus
ENSSHAG00000008464	SMARCA5	100	98.893	ENSGAGG00000019882	SMARCA5	96	98.893	Gopherus_agassizii
ENSSHAG00000008464	SMARCA5	100	98.892	ENSGGOG00000012595	SMARCA5	99	98.892	Gorilla_gorilla
ENSSHAG00000008464	SMARCA5	100	98.993	ENSHGLG00000000816	-	94	98.993	Heterocephalus_glaber_female
ENSSHAG00000008464	SMARCA5	100	89.325	ENSHGLG00000000317	-	95	89.325	Heterocephalus_glaber_female
ENSSHAG00000008464	SMARCA5	100	98.993	ENSHGLG00100018421	-	100	98.993	Heterocephalus_glaber_male
ENSSHAG00000008464	SMARCA5	100	99.295	ENSSTOG00000010683	SMARCA5	94	99.295	Ictidomys_tridecemlineatus
ENSSHAG00000008464	SMARCA5	100	98.792	ENSJJAG00000014965	Smarca5	95	98.792	Jaculus_jaculus
ENSSHAG00000008464	SMARCA5	99	95.863	ENSLACG00000007091	SMARCA5	97	95.863	Latimeria_chalumnae
ENSSHAG00000008464	SMARCA5	99	92.386	ENSLOCG00000008966	SMARCA5	96	92.386	Lepisosteus_oculatus
ENSSHAG00000008464	SMARCA5	100	99.194	ENSLAFG00000007795	SMARCA5	94	99.194	Loxodonta_africana
ENSSHAG00000008464	SMARCA5	100	98.993	ENSMFAG00000043649	SMARCA5	94	98.993	Macaca_fascicularis
ENSSHAG00000008464	SMARCA5	100	98.993	ENSMMUG00000000829	SMARCA5	97	99.051	Macaca_mulatta
ENSSHAG00000008464	SMARCA5	100	98.993	ENSMNEG00000031916	SMARCA5	94	98.993	Macaca_nemestrina
ENSSHAG00000008464	SMARCA5	100	98.993	ENSMLEG00000042393	SMARCA5	94	98.993	Mandrillus_leucophaeus
ENSSHAG00000008464	SMARCA5	99	98.286	ENSMGAG00000003517	SMARCA5	99	98.286	Meleagris_gallopavo
ENSSHAG00000008464	SMARCA5	100	99.094	ENSMAUG00000015902	Smarca5	98	99.094	Mesocricetus_auratus
ENSSHAG00000008464	SMARCA5	100	98.993	ENSMICG00000003971	SMARCA5	99	97.397	Microcebus_murinus
ENSSHAG00000008464	SMARCA5	100	98.691	ENSMOCG00000016986	-	94	98.691	Microtus_ochrogaster
ENSSHAG00000008464	SMARCA5	100	100.000	ENSMODG00000000391	SMARCA5	95	100.000	Monodelphis_domestica
ENSSHAG00000008464	SMARCA5	100	98.792	ENSMUSG00000031715	Smarca5	94	98.792	Mus_musculus
ENSSHAG00000008464	SMARCA5	100	98.993	MGP_PahariEiJ_G0022862	Smarca5	94	98.993	Mus_pahari
ENSSHAG00000008464	SMARCA5	100	99.295	ENSMLUG00000000468	SMARCA5	94	99.295	Myotis_lucifugus
ENSSHAG00000008464	SMARCA5	100	98.993	ENSNGAG00000000441	Smarca5	94	98.993	Nannospalax_galili
ENSSHAG00000008464	SMARCA5	100	98.993	ENSNLEG00000005383	SMARCA5	94	98.993	Nomascus_leucogenys
ENSSHAG00000008464	SMARCA5	97	92.045	ENSMEUG00000001267	SMARCA5	100	92.045	Notamacropus_eugenii
ENSSHAG00000008464	SMARCA5	90	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSSHAG00000008464	SMARCA5	98	99.897	ENSOANG00000013921	SMARCA5	100	99.897	Ornithorhynchus_anatinus
ENSSHAG00000008464	SMARCA5	98	99.278	ENSOCUG00000013042	SMARCA5	100	99.278	Oryctolagus_cuniculus
ENSSHAG00000008464	SMARCA5	100	98.993	ENSOGAG00000009702	SMARCA5	94	98.993	Otolemur_garnettii
ENSSHAG00000008464	SMARCA5	99	98.891	ENSOARG00000010589	SMARCA5	94	98.891	Ovis_aries
ENSSHAG00000008464	SMARCA5	100	98.792	ENSPPAG00000028523	SMARCA5	99	98.792	Pan_paniscus
ENSSHAG00000008464	SMARCA5	100	93.253	ENSPPRG00000004925	SMARCA5	94	94.159	Panthera_pardus
ENSSHAG00000008464	SMARCA5	100	99.194	ENSPTIG00000020959	SMARCA5	95	99.194	Panthera_tigris_altaica
ENSSHAG00000008464	SMARCA5	100	98.892	ENSPTRG00000016472	SMARCA5	99	98.892	Pan_troglodytes
ENSSHAG00000008464	SMARCA5	100	98.993	ENSPANG00000001175	SMARCA5	94	98.993	Papio_anubis
ENSSHAG00000008464	SMARCA5	98	91.649	ENSPKIG00000015885	SMARCA5	100	91.649	Paramormyrops_kingsleyae
ENSSHAG00000008464	SMARCA5	98	91.086	ENSPKIG00000015699	SMARCA5	98	90.071	Paramormyrops_kingsleyae
ENSSHAG00000008464	SMARCA5	99	96.573	ENSPSIG00000004177	SMARCA5	99	96.573	Pelodiscus_sinensis
ENSSHAG00000008464	SMARCA5	97	90.432	ENSPMGG00000012316	SMARCA5	100	90.432	Periophthalmus_magnuspinnatus
ENSSHAG00000008464	SMARCA5	100	99.094	ENSPEMG00000008060	Smarca5	98	99.094	Peromyscus_maniculatus_bairdii
ENSSHAG00000008464	SMARCA5	99	70.382	ENSPMAG00000006011	SMARCA5	81	85.440	Petromyzon_marinus
ENSSHAG00000008464	SMARCA5	64	86.583	ENSPMAG00000008026	SMARCA5	99	86.583	Petromyzon_marinus
ENSSHAG00000008464	SMARCA5	100	100.000	ENSPCIG00000003926	SMARCA5	95	100.000	Phascolarctos_cinereus
ENSSHAG00000008464	SMARCA5	100	98.993	ENSPPYG00000015091	SMARCA5	94	98.993	Pongo_abelii
ENSSHAG00000008464	SMARCA5	84	95.000	ENSPCAG00000014230	SMARCA5	83	95.000	Procavia_capensis
ENSSHAG00000008464	SMARCA5	100	96.073	ENSPCOG00000026744	SMARCA5	99	95.674	Propithecus_coquereli
ENSSHAG00000008464	SMARCA5	100	99.094	ENSPVAG00000006482	SMARCA5	95	99.094	Pteropus_vampyrus
ENSSHAG00000008464	SMARCA5	100	90.342	ENSPNAG00000027824	SMARCA5	97	90.664	Pygocentrus_nattereri
ENSSHAG00000008464	SMARCA5	100	98.892	ENSRNOG00000018149	Smarca5	99	98.892	Rattus_norvegicus
ENSSHAG00000008464	SMARCA5	100	98.993	ENSRBIG00000044644	SMARCA5	94	98.993	Rhinopithecus_bieti
ENSSHAG00000008464	SMARCA5	100	98.993	ENSRROG00000029591	SMARCA5	99	98.993	Rhinopithecus_roxellana
ENSSHAG00000008464	SMARCA5	100	98.993	ENSSBOG00000036257	SMARCA5	94	98.993	Saimiri_boliviensis_boliviensis
ENSSHAG00000008464	SMARCA5	99	90.983	ENSSFOG00015013252	SMARCA5	96	90.983	Scleropages_formosus
ENSSHAG00000008464	SMARCA5	99	96.970	ENSSPUG00000007604	SMARCA5	99	96.970	Sphenodon_punctatus
ENSSHAG00000008464	SMARCA5	100	99.194	ENSSSCG00000009047	SMARCA5	94	99.194	Sus_scrofa
ENSSHAG00000008464	SMARCA5	99	97.379	ENSTGUG00000002408	SMARCA5	98	97.379	Taeniopygia_guttata
ENSSHAG00000008464	SMARCA5	98	99.178	ENSUAMG00000023495	SMARCA5	93	99.178	Ursus_americanus
ENSSHAG00000008464	SMARCA5	100	99.194	ENSUMAG00000015324	SMARCA5	96	99.194	Ursus_maritimus
ENSSHAG00000008464	SMARCA5	100	98.892	ENSVPAG00000008982	SMARCA5	94	98.892	Vicugna_pacos
ENSSHAG00000008464	SMARCA5	100	99.194	ENSVVUG00000017473	SMARCA5	94	99.194	Vulpes_vulpes
ENSSHAG00000008464	SMARCA5	94	94.143	ENSXETG00000017566	smarca5	94	94.143	Xenopus_tropicalis