EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000008493 (Gene tree)
Gene ID: -
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 45489 bases
Position: chrGL841527.1:429186-474674
Accession: 8609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000009812	R3H	PF01424.22	6.7e-06	1	1
ENSSHAP00000009812	CAF1	PF04857.20	3.6e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000009898	PARN-201	1809	-	ENSSHAP00000009812	447 (aa)	-	G3W307

Gene Model

Click here to download ENSSHAG00000008493's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000008493's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000008493	PARN	94	93.541	ENSG00000140694	PARN	96	84.651	Homo_sapiens
ENSSHAG00000008493	PARN	94	92.601	ENSAMEG00000011208	PARN	66	92.601	Ailuropoda_melanoleuca
ENSSHAG00000008493	PARN	93	76.077	ENSACIG00000000619	parn	76	72.131	Amphilophus_citrinellus
ENSSHAG00000008493	PARN	93	79.187	ENSAOCG00000003465	parn	61	79.187	Amphiprion_ocellaris
ENSSHAG00000008493	PARN	81	78.788	ENSAPEG00000010661	parn	69	78.788	Amphiprion_percula
ENSSHAG00000008493	PARN	93	80.144	ENSATEG00000004661	parn	61	80.144	Anabas_testudineus
ENSSHAG00000008493	PARN	94	90.431	ENSAPLG00000013914	PARN	66	90.431	Anas_platyrhynchos
ENSSHAG00000008493	PARN	94	86.396	ENSACAG00000004973	PARN	64	86.396	Anolis_carolinensis
ENSSHAG00000008493	PARN	94	92.823	ENSANAG00000031516	PARN	83	88.889	Aotus_nancymaae
ENSSHAG00000008493	PARN	93	79.665	ENSACLG00000004742	parn	62	79.665	Astatotilapia_calliptera
ENSSHAG00000008493	PARN	93	77.938	ENSAMXG00000012390	parn	65	77.938	Astyanax_mexicanus
ENSSHAG00000008493	PARN	94	88.995	ENSBTAG00000018097	PARN	69	88.462	Bos_taurus
ENSSHAG00000008493	PARN	94	93.062	ENSCJAG00000015866	PARN	83	88.889	Callithrix_jacchus
ENSSHAG00000008493	PARN	94	92.344	ENSCAFG00000018795	PARN	66	92.344	Canis_familiaris
ENSSHAG00000008493	PARN	94	92.344	ENSCAFG00020024126	PARN	66	92.344	Canis_lupus_dingo
ENSSHAG00000008493	PARN	94	93.301	ENSCHIG00000018143	PARN	66	93.301	Capra_hircus
ENSSHAG00000008493	PARN	92	58.548	ENSCAPG00000007984	PARN	70	58.548	Cavia_aperea
ENSSHAG00000008493	PARN	93	91.847	ENSCPOG00000002263	PARN	65	91.847	Cavia_porcellus
ENSSHAG00000008493	PARN	94	92.823	ENSCCAG00000030367	PARN	83	88.889	Cebus_capucinus
ENSSHAG00000008493	PARN	94	93.062	ENSCATG00000041368	PARN	75	93.062	Cercocebus_atys
ENSSHAG00000008493	PARN	56	36.957	ENSCATG00000033196	PNLDC1	53	36.957	Cercocebus_atys
ENSSHAG00000008493	PARN	93	92.326	ENSCLAG00000015406	PARN	65	92.326	Chinchilla_lanigera
ENSSHAG00000008493	PARN	94	93.301	ENSCSAG00000008142	PARN	65	93.301	Chlorocebus_sabaeus
ENSSHAG00000008493	PARN	93	79.327	ENSCHOG00000007014	PARN	68	79.327	Choloepus_hoffmanni
ENSSHAG00000008493	PARN	81	91.713	ENSCPBG00000006609	PARN	63	91.713	Chrysemys_picta_bellii
ENSSHAG00000008493	PARN	95	41.950	ENSCING00000010142	-	83	41.950	Ciona_intestinalis
ENSSHAG00000008493	PARN	88	88.000	ENSCANG00000028849	-	64	88.000	Colobus_angolensis_palliatus
ENSSHAG00000008493	PARN	94	87.560	ENSCGRG00001012096	Parn	66	87.560	Cricetulus_griseus_chok1gshd
ENSSHAG00000008493	PARN	94	87.560	ENSCGRG00000004939	Parn	66	87.560	Cricetulus_griseus_crigri
ENSSHAG00000008493	PARN	93	75.359	ENSCSEG00000002064	parn	97	63.721	Cynoglossus_semilaevis
ENSSHAG00000008493	PARN	93	79.187	ENSCVAG00000014848	parn	61	79.187	Cyprinodon_variegatus
ENSSHAG00000008493	PARN	93	73.381	ENSDARG00000102634	parn	97	62.037	Danio_rerio
ENSSHAG00000008493	PARN	94	93.795	ENSDNOG00000000833	PARN	74	93.301	Dasypus_novemcinctus
ENSSHAG00000008493	PARN	71	93.548	ENSETEG00000014828	-	52	93.548	Echinops_telfairi
ENSSHAG00000008493	PARN	88	30.864	ENSEBUG00000008118	PNLDC1	72	30.864	Eptatretus_burgeri
ENSSHAG00000008493	PARN	94	93.062	ENSEASG00005011400	PARN	66	93.062	Equus_asinus_asinus
ENSSHAG00000008493	PARN	94	92.584	ENSECAG00000017792	PARN	66	92.584	Equus_caballus
ENSSHAG00000008493	PARN	93	78.177	ENSELUG00000013139	parn	55	78.177	Esox_lucius
ENSSHAG00000008493	PARN	94	93.301	ENSFCAG00000044961	PARN	66	93.301	Felis_catus
ENSSHAG00000008493	PARN	93	89.663	ENSFALG00000003911	PARN	65	89.663	Ficedula_albicollis
ENSSHAG00000008493	PARN	82	31.316	ENSFALG00000012081	PNLDC1	70	31.316	Ficedula_albicollis
ENSSHAG00000008493	PARN	93	91.607	ENSFDAG00000009234	PARN	65	91.607	Fukomys_damarensis
ENSSHAG00000008493	PARN	94	71.905	ENSFHEG00000013738	parn	83	79.245	Fundulus_heteroclitus
ENSSHAG00000008493	PARN	93	77.273	ENSGMOG00000003231	parn	76	77.273	Gadus_morhua
ENSSHAG00000008493	PARN	94	90.431	ENSGALG00000003091	PARN	66	90.431	Gallus_gallus
ENSSHAG00000008493	PARN	93	79.187	ENSGAFG00000011061	parn	61	79.187	Gambusia_affinis
ENSSHAG00000008493	PARN	93	77.273	ENSGACG00000019501	parn	67	77.273	Gasterosteus_aculeatus
ENSSHAG00000008493	PARN	94	93.541	ENSGGOG00000025224	PARN	83	88.889	Gorilla_gorilla
ENSSHAG00000008493	PARN	93	79.665	ENSHBUG00000017906	parn	70	76.960	Haplochromis_burtoni
ENSSHAG00000008493	PARN	93	91.367	ENSHGLG00000010886	PARN	65	91.367	Heterocephalus_glaber_female
ENSSHAG00000008493	PARN	93	91.367	ENSHGLG00100014659	PARN	65	91.367	Heterocephalus_glaber_male
ENSSHAG00000008493	PARN	93	73.381	ENSHCOG00000008683	parn	71	73.381	Hippocampus_comes
ENSSHAG00000008493	PARN	90	68.317	ENSIPUG00000012401	parn	59	68.317	Ictalurus_punctatus
ENSSHAG00000008493	PARN	94	92.584	ENSSTOG00000007519	PARN	66	92.584	Ictidomys_tridecemlineatus
ENSSHAG00000008493	PARN	94	90.191	ENSJJAG00000023049	Parn	67	90.191	Jaculus_jaculus
ENSSHAG00000008493	PARN	93	79.187	ENSKMAG00000009462	parn	61	79.187	Kryptolebias_marmoratus
ENSSHAG00000008493	PARN	93	78.469	ENSLBEG00000009167	parn	65	78.469	Labrus_bergylta
ENSSHAG00000008493	PARN	94	79.286	ENSLACG00000004207	PARN	98	79.616	Latimeria_chalumnae
ENSSHAG00000008493	PARN	93	81.295	ENSLOCG00000000715	parn	61	81.295	Lepisosteus_oculatus
ENSSHAG00000008493	PARN	68	31.429	ENSLAFG00000030189	PNLDC1	88	30.514	Loxodonta_africana
ENSSHAG00000008493	PARN	94	92.105	ENSLAFG00000015036	PARN	66	92.105	Loxodonta_africana
ENSSHAG00000008493	PARN	94	87.799	ENSMFAG00000044852	PARN	63	93.923	Macaca_fascicularis
ENSSHAG00000008493	PARN	94	93.301	ENSMMUG00000018849	PARN	65	93.301	Macaca_mulatta
ENSSHAG00000008493	PARN	94	93.301	ENSMNEG00000045108	PARN	65	93.301	Macaca_nemestrina
ENSSHAG00000008493	PARN	94	93.062	ENSMLEG00000031743	PARN	65	93.062	Mandrillus_leucophaeus
ENSSHAG00000008493	PARN	72	30.154	ENSMLEG00000044059	PNLDC1	58	30.154	Mandrillus_leucophaeus
ENSSHAG00000008493	PARN	93	78.230	ENSMAMG00000006939	parn	61	78.230	Mastacembelus_armatus
ENSSHAG00000008493	PARN	93	79.665	ENSMZEG00005013590	parn	71	76.429	Maylandia_zebra
ENSSHAG00000008493	PARN	89	89.724	ENSMGAG00000001004	PARN	63	89.724	Meleagris_gallopavo
ENSSHAG00000008493	PARN	94	78.923	ENSMAUG00000008025	Parn	65	78.923	Mesocricetus_auratus
ENSSHAG00000008493	PARN	94	93.541	ENSMICG00000016053	PARN	83	90.741	Microcebus_murinus
ENSSHAG00000008493	PARN	94	87.321	ENSMOCG00000022211	Parn	84	87.321	Microtus_ochrogaster
ENSSHAG00000008493	PARN	93	76.077	ENSMMOG00000011333	parn	67	76.077	Mola_mola
ENSSHAG00000008493	PARN	94	97.381	ENSMODG00000004915	PARN	84	97.381	Monodelphis_domestica
ENSSHAG00000008493	PARN	93	78.708	ENSMALG00000019426	parn	71	78.708	Monopterus_albus
ENSSHAG00000008493	PARN	94	86.842	MGP_CAROLIEiJ_G0020466	Parn	66	86.842	Mus_caroli
ENSSHAG00000008493	PARN	94	86.842	ENSMUSG00000022685	Parn	94	88.312	Mus_musculus
ENSSHAG00000008493	PARN	72	30.154	ENSMUSG00000073460	Pnldc1	95	30.154	Mus_musculus
ENSSHAG00000008493	PARN	94	86.603	MGP_PahariEiJ_G0016172	Parn	66	86.603	Mus_pahari
ENSSHAG00000008493	PARN	94	86.842	MGP_SPRETEiJ_G0021361	Parn	66	86.842	Mus_spretus
ENSSHAG00000008493	PARN	94	93.541	ENSMPUG00000014464	PARN	66	93.541	Mustela_putorius_furo
ENSSHAG00000008493	PARN	94	90.215	ENSMLUG00000005414	PARN	85	90.215	Myotis_lucifugus
ENSSHAG00000008493	PARN	93	75.837	ENSNBRG00000006805	parn	70	75.837	Neolamprologus_brichardi
ENSSHAG00000008493	PARN	94	93.541	ENSNLEG00000010241	PARN	83	88.889	Nomascus_leucogenys
ENSSHAG00000008493	PARN	91	68.473	ENSMEUG00000008178	-	64	68.473	Notamacropus_eugenii
ENSSHAG00000008493	PARN	93	85.577	ENSOPRG00000012187	PARN	66	85.577	Ochotona_princeps
ENSSHAG00000008493	PARN	93	81.667	ENSODEG00000001617	PARN	66	81.667	Octodon_degus
ENSSHAG00000008493	PARN	93	79.665	ENSONIG00000000151	parn	65	79.665	Oreochromis_niloticus
ENSSHAG00000008493	PARN	82	30.423	ENSOANG00000012199	PNLDC1	73	30.175	Ornithorhynchus_anatinus
ENSSHAG00000008493	PARN	94	92.601	ENSOCUG00000000322	PARN	66	92.601	Oryctolagus_cuniculus
ENSSHAG00000008493	PARN	94	78.043	ENSORLG00020010313	parn	62	78.043	Oryzias_latipes_hni
ENSSHAG00000008493	PARN	94	77.804	ENSORLG00015000300	parn	62	77.804	Oryzias_latipes_hsok
ENSSHAG00000008493	PARN	94	78.282	ENSOMEG00000019555	parn	95	67.130	Oryzias_melastigma
ENSSHAG00000008493	PARN	94	89.524	ENSOGAG00000014626	PARN	85	89.524	Otolemur_garnettii
ENSSHAG00000008493	PARN	94	93.079	ENSOARG00000007574	PARN	85	93.079	Ovis_aries
ENSSHAG00000008493	PARN	94	93.780	ENSPPAG00000031438	PARN	83	88.889	Pan_paniscus
ENSSHAG00000008493	PARN	94	93.301	ENSPPRG00000018583	PARN	66	93.301	Panthera_pardus
ENSSHAG00000008493	PARN	94	93.301	ENSPTIG00000012135	PARN	66	93.301	Panthera_tigris_altaica
ENSSHAG00000008493	PARN	94	93.301	ENSPTRG00000007792	PARN	83	88.889	Pan_troglodytes
ENSSHAG00000008493	PARN	94	88.756	ENSPANG00000020099	PARN	65	88.517	Papio_anubis
ENSSHAG00000008493	PARN	93	78.846	ENSPKIG00000022807	parn	66	72.749	Paramormyrops_kingsleyae
ENSSHAG00000008493	PARN	94	89.952	ENSPSIG00000014804	PARN	65	89.952	Pelodiscus_sinensis
ENSSHAG00000008493	PARN	58	30.534	ENSPSIG00000011419	PNLDC1	79	30.534	Pelodiscus_sinensis
ENSSHAG00000008493	PARN	94	73.508	ENSPMGG00000014431	parn	57	74.224	Periophthalmus_magnuspinnatus
ENSSHAG00000008493	PARN	94	84.450	ENSPEMG00000018439	Parn	66	84.450	Peromyscus_maniculatus_bairdii
ENSSHAG00000008493	PARN	93	65.238	ENSPMAG00000003956	parn	79	65.238	Petromyzon_marinus
ENSSHAG00000008493	PARN	99	86.907	ENSPCIG00000001259	PARN	90	91.106	Phascolarctos_cinereus
ENSSHAG00000008493	PARN	93	78.947	ENSPFOG00000012823	parn	61	78.947	Poecilia_formosa
ENSSHAG00000008493	PARN	93	79.187	ENSPLAG00000006395	parn	61	79.187	Poecilia_latipinna
ENSSHAG00000008493	PARN	93	79.187	ENSPMEG00000007711	parn	61	79.187	Poecilia_mexicana
ENSSHAG00000008493	PARN	93	78.947	ENSPREG00000000147	parn	61	78.947	Poecilia_reticulata
ENSSHAG00000008493	PARN	94	92.619	ENSPPYG00000007123	PARN	66	92.619	Pongo_abelii
ENSSHAG00000008493	PARN	87	84.359	ENSPCAG00000001741	PARN	64	84.359	Procavia_capensis
ENSSHAG00000008493	PARN	94	89.713	ENSPCOG00000019292	PARN	83	90.741	Propithecus_coquereli
ENSSHAG00000008493	PARN	92	93.462	ENSPVAG00000002547	PARN	65	93.462	Pteropus_vampyrus
ENSSHAG00000008493	PARN	93	79.665	ENSPNYG00000006835	parn	70	73.159	Pundamilia_nyererei
ENSSHAG00000008493	PARN	84	77.454	ENSPNAG00000018905	parn	62	77.454	Pygocentrus_nattereri
ENSSHAG00000008493	PARN	94	86.842	ENSRNOG00000002912	Parn	98	85.859	Rattus_norvegicus
ENSSHAG00000008493	PARN	72	30.154	ENSRNOG00000023140	Pnldc1	88	30.154	Rattus_norvegicus
ENSSHAG00000008493	PARN	94	90.431	ENSSBOG00000034726	PARN	65	90.431	Saimiri_boliviensis_boliviensis
ENSSHAG00000008493	PARN	93	80.815	ENSSFOG00015014165	parn	69	78.657	Scleropages_formosus
ENSSHAG00000008493	PARN	93	75.837	ENSSMAG00000000685	parn	68	69.575	Scophthalmus_maximus
ENSSHAG00000008493	PARN	93	78.708	ENSSDUG00000014555	parn	61	78.708	Seriola_dumerili
ENSSHAG00000008493	PARN	81	92.857	ENSSARG00000014339	PARN	63	92.857	Sorex_araneus
ENSSHAG00000008493	PARN	93	91.607	ENSSPUG00000007719	PARN	65	91.607	Sphenodon_punctatus
ENSSHAG00000008493	PARN	93	80.383	ENSSPAG00000007095	parn	61	80.383	Stegastes_partitus
ENSSHAG00000008493	PARN	94	93.780	ENSSSCG00000007878	PARN	58	93.780	Sus_scrofa
ENSSHAG00000008493	PARN	79	30.641	ENSTGUG00000011418	PNLDC1	68	30.641	Taeniopygia_guttata
ENSSHAG00000008493	PARN	94	90.191	ENSTGUG00000004971	PARN	66	90.191	Taeniopygia_guttata
ENSSHAG00000008493	PARN	63	62.385	ENSTRUG00000015208	-	99	62.385	Takifugu_rubripes
ENSSHAG00000008493	PARN	93	78.708	ENSTNIG00000008252	parn	66	78.708	Tetraodon_nigroviridis
ENSSHAG00000008493	PARN	81	73.077	ENSTBEG00000010407	PARN	62	73.077	Tupaia_belangeri
ENSSHAG00000008493	PARN	93	92.548	ENSTTRG00000002843	PARN	66	92.548	Tursiops_truncatus
ENSSHAG00000008493	PARN	81	78.237	ENSUAMG00000008283	PARN	74	78.237	Ursus_americanus
ENSSHAG00000008493	PARN	94	93.062	ENSUMAG00000004527	PARN	66	93.062	Ursus_maritimus
ENSSHAG00000008493	PARN	93	89.183	ENSVPAG00000008968	PARN	68	89.183	Vicugna_pacos
ENSSHAG00000008493	PARN	94	92.823	ENSVVUG00000019509	PARN	66	92.823	Vulpes_vulpes
ENSSHAG00000008493	PARN	94	82.536	ENSXETG00000010994	parn	79	82.536	Xenopus_tropicalis
ENSSHAG00000008493	PARN	88	77.354	ENSXCOG00000015990	parn	66	77.354	Xiphophorus_couchianus
ENSSHAG00000008493	PARN	93	79.187	ENSXMAG00000014783	parn	61	79.187	Xiphophorus_maculatus