EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000008520 (Gene tree)
Gene ID: 100915932
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 2561 bases
Position: chrGL849748.1:432523-435083
Accession: 100915932
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000009839	MMR_HSR1	PF01926.23	5.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000009926	-	731	-	ENSSHAP00000009839	220 (aa)	XP_003765077	G3W334

Gene Model

Click here to download ENSSHAG00000008520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000008520's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000008520	-	94	35.437	ENSSHAG00000013263	RAB15	96	35.437
ENSSHAG00000008520	-	75	35.366	ENSSHAG00000006085	RAB31	83	35.366
ENSSHAG00000008520	-	93	41.429	ENSSHAG00000013149	-	98	41.429
ENSSHAG00000008520	-	75	35.152	ENSSHAG00000006631	KRAS	97	33.166
ENSSHAG00000008520	-	73	37.267	ENSSHAG00000006833	-	96	37.267
ENSSHAG00000008520	-	83	41.758	ENSSHAG00000010376	-	87	41.758
ENSSHAG00000008520	-	75	42.012	ENSSHAG00000012788	RAB9B	83	42.012
ENSSHAG00000008520	-	80	42.614	ENSSHAG00000011866	-	83	42.690
ENSSHAG00000008520	-	78	36.842	ENSSHAG00000007613	RAB18	83	36.628
ENSSHAG00000008520	-	77	34.706	ENSSHAG00000005267	-	74	34.706
ENSSHAG00000008520	-	80	38.636	ENSSHAG00000001489	RAB12	75	38.636
ENSSHAG00000008520	-	90	39.303	ENSSHAG00000003597	RAB1A	94	39.303
ENSSHAG00000008520	-	74	32.727	ENSSHAG00000001457	-	84	32.727
ENSSHAG00000008520	-	75	36.970	ENSSHAG00000009306	RAB17	77	36.970
ENSSHAG00000008520	-	81	37.989	ENSSHAG00000006816	-	81	37.989
ENSSHAG00000008520	-	86	33.508	ENSSHAG00000016302	RAB22A	95	33.508
ENSSHAG00000008520	-	89	34.158	ENSSHAG00000007727	RAB5B	88	34.158
ENSSHAG00000008520	-	85	33.679	ENSSHAG00000006379	RAB23	85	33.171
ENSSHAG00000008520	-	74	36.747	ENSSHAG00000016787	RAB7A	79	36.747
ENSSHAG00000008520	-	55	30.833	ENSSHAG00000018738	ARL3	63	30.833
ENSSHAG00000008520	-	88	38.776	ENSSHAG00000006622	RAB11A	90	38.776
ENSSHAG00000008520	-	79	36.782	ENSSHAG00000013327	RAB25	80	36.782
ENSSHAG00000008520	-	80	40.223	ENSSHAG00000018081	RAB30	86	40.223
ENSSHAG00000008520	-	75	41.420	ENSSHAG00000007153	RAB3D	72	41.420
ENSSHAG00000008520	-	72	35.849	ENSSHAG00000009032	MRAS	74	35.849
ENSSHAG00000008520	-	74	32.934	ENSSHAG00000004318	-	79	32.934
ENSSHAG00000008520	-	88	32.308	ENSSHAG00000006787	RAB5A	89	32.308
ENSSHAG00000008520	-	51	39.823	ENSSHAG00000016060	RRAS2	65	39.823
ENSSHAG00000008520	-	88	39.896	ENSSHAG00000017800	RAB14	88	39.896

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000008520	-	88	62.437	ENSACIG00000016958	si:dkey-34d22.5	89	62.437	Amphilophus_citrinellus
ENSSHAG00000008520	-	90	61.692	ENSATEG00000010784	si:dkey-34d22.5	78	61.692	Anabas_testudineus
ENSSHAG00000008520	-	97	64.651	ENSCPBG00000011236	-	100	64.651	Chrysemys_picta_bellii
ENSSHAG00000008520	-	99	56.828	ENSCSEG00000019183	si:dkey-34d22.5	99	56.828	Cynoglossus_semilaevis
ENSSHAG00000008520	-	88	58.883	ENSCVAG00000017064	si:dkey-34d22.5	89	58.883	Cyprinodon_variegatus
ENSSHAG00000008520	-	79	44.253	ENSDARG00000100379	si:dkey-34d22.2	94	44.253	Danio_rerio
ENSSHAG00000008520	-	88	67.526	ENSFALG00000001373	-	91	67.526	Ficedula_albicollis
ENSSHAG00000008520	-	88	60.406	ENSFHEG00000012041	si:dkey-34d22.5	88	60.406	Fundulus_heteroclitus
ENSSHAG00000008520	-	97	67.606	ENSGALG00000000994	-	100	67.606	Gallus_gallus
ENSSHAG00000008520	-	88	59.391	ENSGAFG00000008183	si:dkey-34d22.5	89	59.391	Gambusia_affinis
ENSSHAG00000008520	-	91	63.054	ENSGAGG00000004918	-	100	63.054	Gopherus_agassizii
ENSSHAG00000008520	-	88	60.914	ENSHCOG00000015692	si:dkey-34d22.5	91	60.914	Hippocampus_comes
ENSSHAG00000008520	-	93	60.577	ENSKMAG00000012778	si:dkey-34d22.5	94	60.577	Kryptolebias_marmoratus
ENSSHAG00000008520	-	88	61.929	ENSLBEG00000002926	si:dkey-34d22.5	89	61.929	Labrus_bergylta
ENSSHAG00000008520	-	97	58.216	ENSLACG00000012674	si:dkey-34d22.5	100	58.216	Latimeria_chalumnae
ENSSHAG00000008520	-	97	60.465	ENSLOCG00000003467	si:dkey-34d22.5	100	60.465	Lepisosteus_oculatus
ENSSHAG00000008520	-	88	62.944	ENSMMOG00000006846	si:dkey-34d22.5	90	62.944	Mola_mola
ENSSHAG00000008520	-	88	61.929	ENSMALG00000013152	si:dkey-34d22.5	89	61.929	Monopterus_albus
ENSSHAG00000008520	-	88	60.513	ENSORLG00000014099	si:dkey-34d22.5	89	60.513	Oryzias_latipes
ENSSHAG00000008520	-	88	60.513	ENSORLG00020020277	si:dkey-34d22.5	89	60.513	Oryzias_latipes_hni
ENSSHAG00000008520	-	88	60.000	ENSORLG00015000142	si:dkey-34d22.5	89	60.000	Oryzias_latipes_hsok
ENSSHAG00000008520	-	87	60.309	ENSOMEG00000017958	si:dkey-34d22.5	89	60.406	Oryzias_melastigma
ENSSHAG00000008520	-	97	57.273	ENSPKIG00000021209	si:dkey-34d22.5	100	57.273	Paramormyrops_kingsleyae
ENSSHAG00000008520	-	89	68.718	ENSPSIG00000006606	-	97	68.718	Pelodiscus_sinensis
ENSSHAG00000008520	-	88	62.944	ENSPMGG00000001298	-	89	62.944	Periophthalmus_magnuspinnatus
ENSSHAG00000008520	-	100	87.330	ENSPCIG00000022399	-	100	87.330	Phascolarctos_cinereus
ENSSHAG00000008520	-	88	59.391	ENSPFOG00000014499	si:dkey-34d22.5	89	59.391	Poecilia_formosa
ENSSHAG00000008520	-	88	59.391	ENSPLAG00000007773	si:dkey-34d22.5	89	59.391	Poecilia_latipinna
ENSSHAG00000008520	-	88	59.391	ENSPMEG00000012932	si:dkey-34d22.5	89	59.391	Poecilia_mexicana
ENSSHAG00000008520	-	87	62.694	ENSSFOG00015012088	rab42	87	62.694	Scleropages_formosus
ENSSHAG00000008520	-	88	60.914	ENSSLDG00000002646	si:dkey-34d22.5	89	60.914	Seriola_lalandi_dorsalis
ENSSHAG00000008520	-	88	61.929	ENSSPAG00000012955	si:dkey-34d22.5	89	61.929	Stegastes_partitus
ENSSHAG00000008520	-	97	48.357	ENSXETG00000020622	rab39a	100	48.357	Xenopus_tropicalis
ENSSHAG00000008520	-	88	58.883	ENSXCOG00000008410	si:dkey-34d22.5	89	58.883	Xiphophorus_couchianus
ENSSHAG00000008520	-	88	58.883	ENSXMAG00000029317	si:dkey-34d22.5	89	58.883	Xiphophorus_maculatus