EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000008538 (Gene tree)
Gene ID: 100927587
Gene Symbol: SYNJ1
Alias: INPP5G|PARK20
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 118366 bases
Position: chrGL849539.1:434084-552449
Accession: 100927587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000009859	Exo_endo_phos	PF03372.23	6.5e-15	1	1
ENSSHAP00000009860	Exo_endo_phos	PF03372.23	6.5e-15	1	1
ENSSHAP00000009859	DUF1866	PF08952.11	3.1e-55	1	1
ENSSHAP00000009860	DUF1866	PF08952.11	2.6e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000009946	SYNJ1-201	4689	-	ENSSHAP00000009859	1556 (aa)	XP_023354669	G3W354
ENSSHAT00000009947	SYNJ1-202	4725	-	ENSSHAP00000009860	1569 (aa)	-	G3W355

Gene Model

Click here to download ENSSHAG00000008538's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr00562	Inositol phosphate metabolism	KEGG
shr01100	Metabolic pathways	KEGG
shr04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000008538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000008538	SYNJ1	66	54.545	ENSSHAG00000018881	SYNJ2	68	55.812

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000008538	SYNJ1	99	78.715	ENSG00000159082	SYNJ1	100	93.525	Homo_sapiens
ENSSHAG00000008538	SYNJ1	70	75.686	ENSAPOG00000002809	synj1	95	68.850	Acanthochromis_polyacanthus
ENSSHAG00000008538	SYNJ1	99	78.072	ENSAMEG00000015028	SYNJ1	97	78.072	Ailuropoda_melanoleuca
ENSSHAG00000008538	SYNJ1	83	64.126	ENSACIG00000008857	synj1	95	64.291	Amphilophus_citrinellus
ENSSHAG00000008538	SYNJ1	76	73.054	ENSAOCG00000009835	synj1	95	69.090	Amphiprion_ocellaris
ENSSHAG00000008538	SYNJ1	70	75.503	ENSAPEG00000021010	synj1	90	60.103	Amphiprion_percula
ENSSHAG00000008538	SYNJ1	70	74.771	ENSATEG00000002306	synj1	87	60.884	Anabas_testudineus
ENSSHAG00000008538	SYNJ1	99	74.510	ENSAPLG00000011832	SYNJ1	99	74.589	Anas_platyrhynchos
ENSSHAG00000008538	SYNJ1	81	80.808	ENSACAG00000003006	-	99	79.470	Anolis_carolinensis
ENSSHAG00000008538	SYNJ1	99	79.051	ENSANAG00000027325	SYNJ1	99	85.550	Aotus_nancymaae
ENSSHAG00000008538	SYNJ1	77	72.103	ENSACLG00000002255	synj1	96	65.889	Astatotilapia_calliptera
ENSSHAG00000008538	SYNJ1	99	77.778	ENSBTAG00000003063	SYNJ1	99	83.798	Bos_taurus
ENSSHAG00000008538	SYNJ1	99	78.418	ENSCJAG00000009187	SYNJ1	99	85.626	Callithrix_jacchus
ENSSHAG00000008538	SYNJ1	99	78.016	ENSCAFG00000009041	SYNJ1	100	82.385	Canis_familiaris
ENSSHAG00000008538	SYNJ1	99	77.580	ENSCAFG00020025776	SYNJ1	97	82.679	Canis_lupus_dingo
ENSSHAG00000008538	SYNJ1	97	78.258	ENSCHIG00000005095	SYNJ1	99	78.033	Capra_hircus
ENSSHAG00000008538	SYNJ1	99	78.338	ENSTSYG00000014541	SYNJ1	99	85.219	Carlito_syrichta
ENSSHAG00000008538	SYNJ1	93	72.253	ENSCAPG00000014483	SYNJ1	99	72.757	Cavia_aperea
ENSSHAG00000008538	SYNJ1	99	77.197	ENSCPOG00000012182	SYNJ1	99	84.621	Cavia_porcellus
ENSSHAG00000008538	SYNJ1	99	76.737	ENSCCAG00000020825	SYNJ1	99	85.473	Cebus_capucinus
ENSSHAG00000008538	SYNJ1	99	78.715	ENSCATG00000033891	SYNJ1	99	85.846	Cercocebus_atys
ENSSHAG00000008538	SYNJ1	97	78.188	ENSCLAG00000009796	SYNJ1	100	92.352	Chinchilla_lanigera
ENSSHAG00000008538	SYNJ1	84	84.773	ENSCSAG00000009654	SYNJ1	99	84.773	Chlorocebus_sabaeus
ENSSHAG00000008538	SYNJ1	81	89.251	ENSCHOG00000012390	SYNJ1	83	88.673	Choloepus_hoffmanni
ENSSHAG00000008538	SYNJ1	80	82.706	ENSCPBG00000006402	SYNJ1	97	84.193	Chrysemys_picta_bellii
ENSSHAG00000008538	SYNJ1	99	78.589	ENSCANG00000031359	SYNJ1	99	85.769	Colobus_angolensis_palliatus
ENSSHAG00000008538	SYNJ1	99	76.700	ENSCGRG00001010861	Synj1	99	83.156	Cricetulus_griseus_chok1gshd
ENSSHAG00000008538	SYNJ1	84	83.156	ENSCGRG00000015749	Synj1	100	91.053	Cricetulus_griseus_crigri
ENSSHAG00000008538	SYNJ1	70	74.319	ENSCSEG00000019614	synj1	98	66.820	Cynoglossus_semilaevis
ENSSHAG00000008538	SYNJ1	70	72.872	ENSCVAG00000019250	synj1	95	65.991	Cyprinodon_variegatus
ENSSHAG00000008538	SYNJ1	70	75.362	ENSDARG00000025011	synj1	95	68.231	Danio_rerio
ENSSHAG00000008538	SYNJ1	99	75.000	ENSDNOG00000010732	SYNJ1	99	75.378	Dasypus_novemcinctus
ENSSHAG00000008538	SYNJ1	72	87.097	ENSETEG00000018674	SYNJ1	73	87.097	Echinops_telfairi
ENSSHAG00000008538	SYNJ1	99	77.897	ENSEASG00005006287	SYNJ1	98	90.615	Equus_asinus_asinus
ENSSHAG00000008538	SYNJ1	99	78.662	ENSECAG00000004829	SYNJ1	99	83.565	Equus_caballus
ENSSHAG00000008538	SYNJ1	90	82.649	ENSEEUG00000005150	SYNJ1	93	82.649	Erinaceus_europaeus
ENSSHAG00000008538	SYNJ1	83	63.931	ENSELUG00000009731	synj1	81	70.956	Esox_lucius
ENSSHAG00000008538	SYNJ1	99	77.884	ENSFCAG00000012498	SYNJ1	99	84.739	Felis_catus
ENSSHAG00000008538	SYNJ1	78	66.083	ENSFALG00000004680	SYNJ1	99	66.507	Ficedula_albicollis
ENSSHAG00000008538	SYNJ1	84	84.015	ENSFDAG00000016818	SYNJ1	100	92.208	Fukomys_damarensis
ENSSHAG00000008538	SYNJ1	83	68.599	ENSFHEG00000017689	synj1	89	60.870	Fundulus_heteroclitus
ENSSHAG00000008538	SYNJ1	64	71.698	ENSGMOG00000014852	synj1	77	71.400	Gadus_morhua
ENSSHAG00000008538	SYNJ1	99	74.571	ENSGALG00000034317	SYNJ1	99	73.460	Gallus_gallus
ENSSHAG00000008538	SYNJ1	70	74.886	ENSGAFG00000019466	synj1	89	61.070	Gambusia_affinis
ENSSHAG00000008538	SYNJ1	70	69.964	ENSGACG00000020575	synj1	95	63.463	Gasterosteus_aculeatus
ENSSHAG00000008538	SYNJ1	99	75.967	ENSGAGG00000022523	SYNJ1	99	81.462	Gopherus_agassizii
ENSSHAG00000008538	SYNJ1	99	78.401	ENSGGOG00000015945	SYNJ1	99	85.538	Gorilla_gorilla
ENSSHAG00000008538	SYNJ1	77	72.103	ENSHBUG00000007774	synj1	96	65.889	Haplochromis_burtoni
ENSSHAG00000008538	SYNJ1	99	77.743	ENSHGLG00000006420	SYNJ1	100	92.352	Heterocephalus_glaber_female
ENSSHAG00000008538	SYNJ1	96	86.763	ENSHGLG00100012591	SYNJ1	100	92.352	Heterocephalus_glaber_male
ENSSHAG00000008538	SYNJ1	84	58.340	ENSHCOG00000012774	synj1	83	73.037	Hippocampus_comes
ENSSHAG00000008538	SYNJ1	71	75.113	ENSIPUG00000010691	SYNJ1	98	59.512	Ictalurus_punctatus
ENSSHAG00000008538	SYNJ1	99	77.792	ENSSTOG00000015806	SYNJ1	99	85.000	Ictidomys_tridecemlineatus
ENSSHAG00000008538	SYNJ1	99	71.788	ENSJJAG00000020168	Synj1	99	72.260	Jaculus_jaculus
ENSSHAG00000008538	SYNJ1	70	75.251	ENSKMAG00000004221	synj1	88	76.000	Kryptolebias_marmoratus
ENSSHAG00000008538	SYNJ1	70	74.382	ENSLBEG00000015081	synj1	96	62.526	Labrus_bergylta
ENSSHAG00000008538	SYNJ1	99	65.611	ENSLACG00000005928	SYNJ1	98	67.179	Latimeria_chalumnae
ENSSHAG00000008538	SYNJ1	95	67.080	ENSLOCG00000009230	synj1	99	67.806	Lepisosteus_oculatus
ENSSHAG00000008538	SYNJ1	97	78.845	ENSLAFG00000011806	SYNJ1	98	78.476	Loxodonta_africana
ENSSHAG00000008538	SYNJ1	97	78.295	ENSMFAG00000018883	SYNJ1	99	85.556	Macaca_fascicularis
ENSSHAG00000008538	SYNJ1	99	78.715	ENSMMUG00000004624	SYNJ1	99	85.377	Macaca_mulatta
ENSSHAG00000008538	SYNJ1	99	78.974	ENSMNEG00000040077	SYNJ1	94	84.848	Macaca_nemestrina
ENSSHAG00000008538	SYNJ1	99	78.715	ENSMLEG00000037029	SYNJ1	99	85.846	Mandrillus_leucophaeus
ENSSHAG00000008538	SYNJ1	83	65.950	ENSMAMG00000013404	synj1	76	66.591	Mastacembelus_armatus
ENSSHAG00000008538	SYNJ1	70	75.229	ENSMZEG00005024358	synj1	96	65.863	Maylandia_zebra
ENSSHAG00000008538	SYNJ1	99	73.826	ENSMGAG00000014522	SYNJ1	99	73.763	Meleagris_gallopavo
ENSSHAG00000008538	SYNJ1	84	82.929	ENSMAUG00000009743	Synj1	100	91.486	Mesocricetus_auratus
ENSSHAG00000008538	SYNJ1	99	78.421	ENSMICG00000034953	SYNJ1	99	86.077	Microcebus_murinus
ENSSHAG00000008538	SYNJ1	73	72.602	ENSMMOG00000010203	synj1	83	73.974	Mola_mola
ENSSHAG00000008538	SYNJ1	83	83.155	ENSMODG00000021073	SYNJ1	99	83.056	Monodelphis_domestica
ENSSHAG00000008538	SYNJ1	84	65.975	ENSMALG00000014015	synj1	88	62.416	Monopterus_albus
ENSSHAG00000008538	SYNJ1	97	77.102	MGP_CAROLIEiJ_G0020951	Synj1	100	91.775	Mus_caroli
ENSSHAG00000008538	SYNJ1	97	77.296	ENSMUSG00000022973	Synj1	100	92.063	Mus_musculus
ENSSHAG00000008538	SYNJ1	97	77.167	MGP_PahariEiJ_G0016656	Synj1	100	92.063	Mus_pahari
ENSSHAG00000008538	SYNJ1	97	77.102	MGP_SPRETEiJ_G0021857	Synj1	100	92.063	Mus_spretus
ENSSHAG00000008538	SYNJ1	99	78.212	ENSMPUG00000001153	SYNJ1	99	77.438	Mustela_putorius_furo
ENSSHAG00000008538	SYNJ1	65	65.937	ENSMLUG00000005764	-	99	65.349	Myotis_lucifugus
ENSSHAG00000008538	SYNJ1	83	84.574	ENSNGAG00000000453	Synj1	100	91.775	Nannospalax_galili
ENSSHAG00000008538	SYNJ1	70	72.004	ENSNBRG00000011936	synj1	95	57.830	Neolamprologus_brichardi
ENSSHAG00000008538	SYNJ1	88	75.210	ENSNLEG00000003734	SYNJ1	99	80.521	Nomascus_leucogenys
ENSSHAG00000008538	SYNJ1	79	79.584	ENSMEUG00000004158	-	78	80.240	Notamacropus_eugenii
ENSSHAG00000008538	SYNJ1	92	88.092	ENSOPRG00000013602	SYNJ1	93	88.092	Ochotona_princeps
ENSSHAG00000008538	SYNJ1	90	64.064	ENSONIG00000004667	synj1	100	64.315	Oreochromis_niloticus
ENSSHAG00000008538	SYNJ1	92	74.257	ENSOANG00000006929	SYNJ1	94	75.051	Ornithorhynchus_anatinus
ENSSHAG00000008538	SYNJ1	99	76.299	ENSOCUG00000001420	SYNJ1	99	76.679	Oryctolagus_cuniculus
ENSSHAG00000008538	SYNJ1	72	73.665	ENSORLG00000004320	synj1	93	67.264	Oryzias_latipes
ENSSHAG00000008538	SYNJ1	70	72.801	ENSORLG00020011994	synj1	81	72.892	Oryzias_latipes_hni
ENSSHAG00000008538	SYNJ1	70	75.068	ENSORLG00015018077	synj1	73	67.240	Oryzias_latipes_hsok
ENSSHAG00000008538	SYNJ1	70	75.068	ENSOMEG00000014322	synj1	99	66.142	Oryzias_melastigma
ENSSHAG00000008538	SYNJ1	99	75.361	ENSOGAG00000006010	SYNJ1	97	75.235	Otolemur_garnettii
ENSSHAG00000008538	SYNJ1	97	77.928	ENSOARG00000013414	SYNJ1	97	77.617	Ovis_aries
ENSSHAG00000008538	SYNJ1	99	79.291	ENSPPAG00000026784	SYNJ1	99	85.769	Pan_paniscus
ENSSHAG00000008538	SYNJ1	99	77.610	ENSPPRG00000023469	SYNJ1	99	84.816	Panthera_pardus
ENSSHAG00000008538	SYNJ1	99	77.673	ENSPTIG00000007930	SYNJ1	99	84.739	Panthera_tigris_altaica
ENSSHAG00000008538	SYNJ1	99	78.715	ENSPTRG00000023787	SYNJ1	99	85.769	Pan_troglodytes
ENSSHAG00000008538	SYNJ1	99	78.294	ENSPTRG00000048135	-	99	83.849	Pan_troglodytes
ENSSHAG00000008538	SYNJ1	99	78.715	ENSPANG00000022531	SYNJ1	99	85.923	Papio_anubis
ENSSHAG00000008538	SYNJ1	75	73.447	ENSPKIG00000022603	synj1	95	73.126	Paramormyrops_kingsleyae
ENSSHAG00000008538	SYNJ1	70	74.703	ENSPMGG00000016831	synj1	93	63.643	Periophthalmus_magnuspinnatus
ENSSHAG00000008538	SYNJ1	84	83.536	ENSPEMG00000018767	Synj1	100	91.775	Peromyscus_maniculatus_bairdii
ENSSHAG00000008538	SYNJ1	65	60.038	ENSPMAG00000002887	synj1	78	60.038	Petromyzon_marinus
ENSSHAG00000008538	SYNJ1	99	88.678	ENSPCIG00000016372	SYNJ1	99	92.939	Phascolarctos_cinereus
ENSSHAG00000008538	SYNJ1	70	74.819	ENSPFOG00000016886	synj1	93	66.822	Poecilia_formosa
ENSSHAG00000008538	SYNJ1	70	74.887	ENSPLAG00000017559	synj1	94	65.831	Poecilia_latipinna
ENSSHAG00000008538	SYNJ1	76	71.405	ENSPMEG00000007643	synj1	89	62.373	Poecilia_mexicana
ENSSHAG00000008538	SYNJ1	70	75.434	ENSPREG00000012412	synj1	94	67.547	Poecilia_reticulata
ENSSHAG00000008538	SYNJ1	84	84.286	ENSPPYG00000011365	SYNJ1	94	84.732	Pongo_abelii
ENSSHAG00000008538	SYNJ1	86	90.000	ENSPCAG00000009906	SYNJ1	89	90.000	Procavia_capensis
ENSSHAG00000008538	SYNJ1	93	86.616	ENSPCOG00000024841	SYNJ1	95	85.891	Propithecus_coquereli
ENSSHAG00000008538	SYNJ1	99	74.149	ENSPVAG00000000892	SYNJ1	99	74.149	Pteropus_vampyrus
ENSSHAG00000008538	SYNJ1	70	74.060	ENSPNYG00000022989	synj1	99	64.955	Pundamilia_nyererei
ENSSHAG00000008538	SYNJ1	70	75.594	ENSPNAG00000021119	synj1	90	75.594	Pygocentrus_nattereri
ENSSHAG00000008538	SYNJ1	97	76.933	ENSRNOG00000002051	Synj1	99	84.823	Rattus_norvegicus
ENSSHAG00000008538	SYNJ1	99	78.652	ENSRBIG00000034477	SYNJ1	99	85.692	Rhinopithecus_bieti
ENSSHAG00000008538	SYNJ1	99	78.841	ENSRROG00000039256	SYNJ1	99	85.846	Rhinopithecus_roxellana
ENSSHAG00000008538	SYNJ1	99	78.612	ENSSBOG00000021001	SYNJ1	99	85.550	Saimiri_boliviensis_boliviensis
ENSSHAG00000008538	SYNJ1	96	62.319	ENSSFOG00015006095	synj1	91	64.057	Scleropages_formosus
ENSSHAG00000008538	SYNJ1	83	66.641	ENSSMAG00000018066	synj1	94	64.955	Scophthalmus_maximus
ENSSHAG00000008538	SYNJ1	83	66.617	ENSSDUG00000013058	synj1	90	61.155	Seriola_dumerili
ENSSHAG00000008538	SYNJ1	83	66.293	ENSSLDG00000021406	synj1	94	66.309	Seriola_lalandi_dorsalis
ENSSHAG00000008538	SYNJ1	66	89.513	ENSSARG00000009490	SYNJ1	70	89.346	Sorex_araneus
ENSSHAG00000008538	SYNJ1	99	74.124	ENSSPUG00000012552	SYNJ1	99	73.138	Sphenodon_punctatus
ENSSHAG00000008538	SYNJ1	65	75.024	ENSSPAG00000006812	SYNJ1	74	66.124	Stegastes_partitus
ENSSHAG00000008538	SYNJ1	70	75.320	ENSSPAG00000017029	synj1	95	64.133	Stegastes_partitus
ENSSHAG00000008538	SYNJ1	99	75.412	ENSSSCG00000012035	SYNJ1	99	83.935	Sus_scrofa
ENSSHAG00000008538	SYNJ1	99	72.802	ENSTGUG00000013445	SYNJ1	99	72.630	Taeniopygia_guttata
ENSSHAG00000008538	SYNJ1	73	71.799	ENSTRUG00000006907	synj1	93	64.462	Takifugu_rubripes
ENSSHAG00000008538	SYNJ1	84	65.292	ENSTNIG00000009940	synj1	97	65.097	Tetraodon_nigroviridis
ENSSHAG00000008538	SYNJ1	89	90.419	ENSTBEG00000016298	SYNJ1	87	90.419	Tupaia_belangeri
ENSSHAG00000008538	SYNJ1	99	71.474	ENSTTRG00000002222	SYNJ1	99	71.094	Tursiops_truncatus
ENSSHAG00000008538	SYNJ1	99	77.594	ENSUAMG00000018606	SYNJ1	99	92.573	Ursus_americanus
ENSSHAG00000008538	SYNJ1	96	88.649	ENSUMAG00000018419	SYNJ1	99	92.573	Ursus_maritimus
ENSSHAG00000008538	SYNJ1	84	92.857	ENSVPAG00000001241	SYNJ1	86	92.857	Vicugna_pacos
ENSSHAG00000008538	SYNJ1	99	78.981	ENSVVUG00000023125	SYNJ1	99	84.230	Vulpes_vulpes
ENSSHAG00000008538	SYNJ1	99	66.355	ENSXETG00000009899	synj1	98	66.815	Xenopus_tropicalis
ENSSHAG00000008538	SYNJ1	70	74.887	ENSXCOG00000011896	synj1	94	66.538	Xiphophorus_couchianus
ENSSHAG00000008538	SYNJ1	76	69.444	ENSXMAG00000017524	synj1	99	65.975	Xiphophorus_maculatus