EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000008811 (Gene tree)
Gene ID: 100930328
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 51645 bases
Position: chrGL841550.1:467907-519551
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000010201	Ago_hook	PF10427.9	9.7e-15	1	1
ENSSHAP00000010200	Ago_hook	PF10427.9	3.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000010290	TNRC6A-203	2634	-	ENSSHAP00000010201	878 (aa)	-	G3W446
ENSSHAT00000010291	TNRC6A-204	1767	-	ENSSHAP00000010202	588 (aa)	-	G3W447
ENSSHAT00000010289	TNRC6A-202	7818	-	ENSSHAP00000010200	1745 (aa)	-	G3W445
ENSSHAT00000010288	TNRC6A-201	2850	-	ENSSHAP00000010199	950 (aa)	-	G3W444

Gene Model

Click here to download ENSSHAG00000008811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000008811's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000008811	TNRC6A	98	35.548	ENSSHAG00000009692	TNRC6B	70	38.489

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000008811	TNRC6A	99	84.160	ENSG00000090905	TNRC6A	100	82.947	Homo_sapiens
ENSSHAG00000008811	TNRC6A	99	82.227	ENSAMEG00000009333	TNRC6A	93	81.874	Ailuropoda_melanoleuca
ENSSHAG00000008811	TNRC6A	99	84.415	ENSAPLG00000009978	TNRC6A	94	84.193	Anas_platyrhynchos
ENSSHAG00000008811	TNRC6A	99	54.502	ENSACAG00000011857	TNRC6A	91	55.783	Anolis_carolinensis
ENSSHAG00000008811	TNRC6A	99	83.932	ENSANAG00000025252	TNRC6A	90	83.476	Aotus_nancymaae
ENSSHAG00000008811	TNRC6A	100	58.283	ENSAMXG00000019919	tnrc6a	100	58.025	Astyanax_mexicanus
ENSSHAG00000008811	TNRC6A	99	84.518	ENSBTAG00000017999	TNRC6A	93	83.248	Bos_taurus
ENSSHAG00000008811	TNRC6A	99	83.875	ENSCJAG00000020677	TNRC6A	89	83.419	Callithrix_jacchus
ENSSHAG00000008811	TNRC6A	99	84.615	ENSCAFG00000017531	TNRC6A	92	84.160	Canis_familiaris
ENSSHAG00000008811	TNRC6A	99	83.647	ENSCAFG00020021160	TNRC6A	93	83.362	Canis_lupus_dingo
ENSSHAG00000008811	TNRC6A	99	84.144	ENSCHIG00000019448	TNRC6A	97	83.400	Capra_hircus
ENSSHAG00000008811	TNRC6A	99	84.046	ENSTSYG00000012711	TNRC6A	90	83.590	Carlito_syrichta
ENSSHAG00000008811	TNRC6A	99	84.046	ENSCPOG00000036684	TNRC6A	91	83.590	Cavia_porcellus
ENSSHAG00000008811	TNRC6A	99	83.932	ENSCCAG00000033664	TNRC6A	90	83.476	Cebus_capucinus
ENSSHAG00000008811	TNRC6A	99	84.330	ENSCATG00000019284	TNRC6A	91	83.875	Cercocebus_atys
ENSSHAG00000008811	TNRC6A	99	80.228	ENSCLAG00000010217	TNRC6A	90	79.772	Chinchilla_lanigera
ENSSHAG00000008811	TNRC6A	99	82.227	ENSCSAG00000006561	TNRC6A	91	81.707	Chlorocebus_sabaeus
ENSSHAG00000008811	TNRC6A	89	86.957	ENSCHOG00000009374	TNRC6A	86	78.075	Choloepus_hoffmanni
ENSSHAG00000008811	TNRC6A	100	85.943	ENSCPBG00000001881	TNRC6A	100	85.771	Chrysemys_picta_bellii
ENSSHAG00000008811	TNRC6A	99	84.274	ENSCANG00000041549	TNRC6A	90	83.818	Colobus_angolensis_palliatus
ENSSHAG00000008811	TNRC6A	99	82.963	ENSCGRG00001015021	Tnrc6a	91	82.678	Cricetulus_griseus_chok1gshd
ENSSHAG00000008811	TNRC6A	99	82.450	ENSCGRG00000013351	Tnrc6a	91	82.165	Cricetulus_griseus_crigri
ENSSHAG00000008811	TNRC6A	100	59.091	ENSDARG00000079688	tnrc6a	100	58.935	Danio_rerio
ENSSHAG00000008811	TNRC6A	99	80.476	ENSDNOG00000013989	TNRC6A	92	80.254	Dasypus_novemcinctus
ENSSHAG00000008811	TNRC6A	99	75.197	ENSETEG00000014658	TNRC6A	92	74.432	Echinops_telfairi
ENSSHAG00000008811	TNRC6A	99	83.941	ENSEASG00005017693	TNRC6A	97	81.747	Equus_asinus_asinus
ENSSHAG00000008811	TNRC6A	99	83.941	ENSECAG00000025056	TNRC6A	97	81.747	Equus_caballus
ENSSHAG00000008811	TNRC6A	99	79.213	ENSEEUG00000004530	TNRC6A	92	75.845	Erinaceus_europaeus
ENSSHAG00000008811	TNRC6A	99	83.761	ENSFCAG00000025236	TNRC6A	90	83.305	Felis_catus
ENSSHAG00000008811	TNRC6A	100	83.222	ENSFALG00000003757	TNRC6A	91	83.000	Ficedula_albicollis
ENSSHAG00000008811	TNRC6A	100	87.621	ENSGALG00000006068	TNRC6A	100	87.279	Gallus_gallus
ENSSHAG00000008811	TNRC6A	100	85.544	ENSGAGG00000023209	TNRC6A	100	85.373	Gopherus_agassizii
ENSSHAG00000008811	TNRC6A	99	84.103	ENSGGOG00000005137	TNRC6A	91	83.647	Gorilla_gorilla
ENSSHAG00000008811	TNRC6A	99	83.295	ENSHGLG00000012474	-	91	82.896	Heterocephalus_glaber_female
ENSSHAG00000008811	TNRC6A	99	65.564	ENSHGLG00000007368	-	89	65.203	Heterocephalus_glaber_female
ENSSHAG00000008811	TNRC6A	99	83.200	ENSHGLG00100012496	-	92	82.800	Heterocephalus_glaber_male
ENSSHAG00000008811	TNRC6A	99	82.480	ENSSTOG00000023394	TNRC6A	89	81.316	Ictidomys_tridecemlineatus
ENSSHAG00000008811	TNRC6A	99	71.280	ENSLACG00000006277	TNRC6A	95	71.280	Latimeria_chalumnae
ENSSHAG00000008811	TNRC6A	100	80.167	ENSLOCG00000005517	tnrc6a	85	79.332	Lepisosteus_oculatus
ENSSHAG00000008811	TNRC6A	99	83.827	ENSLAFG00000004209	TNRC6A	93	83.542	Loxodonta_africana
ENSSHAG00000008811	TNRC6A	99	82.115	ENSMFAG00000003824	TNRC6A	92	81.198	Macaca_fascicularis
ENSSHAG00000008811	TNRC6A	99	84.330	ENSMMUG00000020428	TNRC6A	90	83.875	Macaca_mulatta
ENSSHAG00000008811	TNRC6A	99	84.330	ENSMNEG00000034854	TNRC6A	90	83.875	Macaca_nemestrina
ENSSHAG00000008811	TNRC6A	99	82.115	ENSMLEG00000042737	TNRC6A	90	81.143	Mandrillus_leucophaeus
ENSSHAG00000008811	TNRC6A	99	84.062	ENSMGAG00000006455	TNRC6A	90	83.675	Meleagris_gallopavo
ENSSHAG00000008811	TNRC6A	99	82.963	ENSMAUG00000012750	Tnrc6a	91	82.678	Mesocricetus_auratus
ENSSHAG00000008811	TNRC6A	99	84.672	ENSMICG00000030685	TNRC6A	90	84.217	Microcebus_murinus
ENSSHAG00000008811	TNRC6A	99	83.409	ENSMOCG00000000152	Tnrc6a	91	82.955	Microtus_ochrogaster
ENSSHAG00000008811	TNRC6A	99	96.911	ENSMODG00000016348	TNRC6A	90	95.485	Monodelphis_domestica
ENSSHAG00000008811	TNRC6A	99	82.041	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	80.799	Mus_caroli
ENSSHAG00000008811	TNRC6A	99	82.383	ENSMUSG00000052707	Tnrc6a	99	81.079	Mus_musculus
ENSSHAG00000008811	TNRC6A	99	82.336	MGP_PahariEiJ_G0013635	Tnrc6a	100	81.149	Mus_pahari
ENSSHAG00000008811	TNRC6A	99	80.090	MGP_SPRETEiJ_G0031539	Tnrc6a	100	80.659	Mus_spretus
ENSSHAG00000008811	TNRC6A	99	77.212	ENSMPUG00000012324	TNRC6A	93	76.229	Mustela_putorius_furo
ENSSHAG00000008811	TNRC6A	99	79.545	ENSMLUG00000002701	TNRC6A	94	79.157	Myotis_lucifugus
ENSSHAG00000008811	TNRC6A	99	83.542	ENSNGAG00000020702	Tnrc6a	91	83.087	Nannospalax_galili
ENSSHAG00000008811	TNRC6A	99	83.333	ENSNLEG00000011851	TNRC6A	92	83.049	Nomascus_leucogenys
ENSSHAG00000008811	TNRC6A	74	95.476	ENSMEUG00000015959	-	69	95.476	Notamacropus_eugenii
ENSSHAG00000008811	TNRC6A	99	80.090	ENSOPRG00000005819	TNRC6A	86	82.993	Ochotona_princeps
ENSSHAG00000008811	TNRC6A	99	79.340	ENSODEG00000012802	TNRC6A	91	79.454	Octodon_degus
ENSSHAG00000008811	TNRC6A	99	81.685	ENSOANG00000007672	TNRC6A	100	83.669	Ornithorhynchus_anatinus
ENSSHAG00000008811	TNRC6A	99	82.167	ENSOCUG00000004325	TNRC6A	94	79.446	Oryctolagus_cuniculus
ENSSHAG00000008811	TNRC6A	99	82.379	ENSOGAG00000006666	TNRC6A	92	81.672	Otolemur_garnettii
ENSSHAG00000008811	TNRC6A	99	84.545	ENSOARG00000017950	TNRC6A	98	83.801	Ovis_aries
ENSSHAG00000008811	TNRC6A	99	84.160	ENSPPAG00000028379	TNRC6A	90	83.704	Pan_paniscus
ENSSHAG00000008811	TNRC6A	99	83.818	ENSPPRG00000005861	TNRC6A	90	83.362	Panthera_pardus
ENSSHAG00000008811	TNRC6A	99	83.875	ENSPTIG00000006346	TNRC6A	90	83.419	Panthera_tigris_altaica
ENSSHAG00000008811	TNRC6A	99	81.929	ENSPTRG00000007898	TNRC6A	92	81.707	Pan_troglodytes
ENSSHAG00000008811	TNRC6A	99	82.227	ENSPANG00000018523	TNRC6A	90	81.197	Papio_anubis
ENSSHAG00000008811	TNRC6A	94	80.000	ENSPKIG00000012859	tnrc6a	99	80.000	Paramormyrops_kingsleyae
ENSSHAG00000008811	TNRC6A	85	79.705	ENSPSIG00000003965	TNRC6A	100	79.046	Pelodiscus_sinensis
ENSSHAG00000008811	TNRC6A	99	83.124	ENSPEMG00000016318	Tnrc6a	91	82.668	Peromyscus_maniculatus_bairdii
ENSSHAG00000008811	TNRC6A	100	96.848	ENSPCIG00000012106	TNRC6A	94	96.848	Phascolarctos_cinereus
ENSSHAG00000008811	TNRC6A	99	81.665	ENSPPYG00000007202	TNRC6A	90	81.098	Pongo_abelii
ENSSHAG00000008811	TNRC6A	92	88.660	ENSPCAG00000008260	TNRC6A	85	88.660	Procavia_capensis
ENSSHAG00000008811	TNRC6A	99	82.227	ENSPCOG00000010134	TNRC6A	90	81.425	Propithecus_coquereli
ENSSHAG00000008811	TNRC6A	99	60.494	ENSPVAG00000012066	TNRC6A	91	63.873	Pteropus_vampyrus
ENSSHAG00000008811	TNRC6A	99	82.507	ENSRNOG00000024737	Tnrc6a	90	82.051	Rattus_norvegicus
ENSSHAG00000008811	TNRC6A	99	84.160	ENSRBIG00000014222	TNRC6A	92	83.704	Rhinopithecus_bieti
ENSSHAG00000008811	TNRC6A	99	82.227	ENSRROG00000032360	TNRC6A	91	81.707	Rhinopithecus_roxellana
ENSSHAG00000008811	TNRC6A	99	83.049	ENSSBOG00000036197	TNRC6A	100	82.407	Saimiri_boliviensis_boliviensis
ENSSHAG00000008811	TNRC6A	100	61.479	ENSSFOG00015008920	tnrc6a	100	61.310	Scleropages_formosus
ENSSHAG00000008811	TNRC6A	82	76.730	ENSSARG00000002479	TNRC6A	80	67.760	Sorex_araneus
ENSSHAG00000008811	TNRC6A	99	81.007	ENSSPUG00000010525	TNRC6A	100	80.435	Sphenodon_punctatus
ENSSHAG00000008811	TNRC6A	99	85.206	ENSSSCG00000038870	TNRC6A	100	85.030	Sus_scrofa
ENSSHAG00000008811	TNRC6A	99	84.646	ENSTGUG00000006142	TNRC6A	92	84.018	Taeniopygia_guttata
ENSSHAG00000008811	TNRC6A	99	81.777	ENSTBEG00000014965	TNRC6A	93	79.157	Tupaia_belangeri
ENSSHAG00000008811	TNRC6A	93	82.773	ENSTTRG00000002008	TNRC6A	83	82.458	Tursiops_truncatus
ENSSHAG00000008811	TNRC6A	99	82.565	ENSUAMG00000006656	-	85	83.442	Ursus_americanus
ENSSHAG00000008811	TNRC6A	99	83.543	ENSUMAG00000008274	TNRC6A	100	85.468	Ursus_maritimus
ENSSHAG00000008811	TNRC6A	93	93.514	ENSVVUG00000005380	TNRC6A	91	93.514	Vulpes_vulpes
ENSSHAG00000008811	TNRC6A	99	66.282	ENSXETG00000030437	TNRC6A	96	66.135	Xenopus_tropicalis