EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000008992 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 21325 bases
Position: chrGL834451.1:490885-512209
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000010416	RRM_1	PF00076.22	8.5e-16	1	1
ENSSHAP00000010415	RRM_1	PF00076.22	2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000010508	-	276	-	ENSSHAP00000010415	92 (aa)	-	G3W4R0
ENSSHAT00000010509	-	285	-	ENSSHAP00000010416	95 (aa)	-	G3W4R1

Gene Model

Click here to download ENSSHAG00000008992's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000008992's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000008992	-	80	72.973	ENSSHAG00000001767	-	53	76.056
ENSSHAG00000008992	-	83	32.836	ENSSHAG00000005583	ELAVL3	63	32.836

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000008992	-	98	83.871	ENSG00000140488	CELF6	64	89.412	Homo_sapiens
ENSSHAG00000008992	-	73	80.597	ENSAPLG00000001120	-	70	81.818	Anas_platyrhynchos
ENSSHAG00000008992	-	73	82.090	ENSACAG00000010826	-	71	82.090	Anolis_carolinensis
ENSSHAG00000008992	-	98	82.796	ENSCAFG00020006479	-	54	84.615	Canis_lupus_dingo
ENSSHAG00000008992	-	100	86.316	ENSCSAG00000017935	-	66	86.316	Chlorocebus_sabaeus
ENSSHAG00000008992	-	98	87.097	ENSCPBG00000015256	-	57	87.097	Chrysemys_picta_bellii
ENSSHAG00000008992	-	53	91.837	ENSCPBG00000005209	-	54	91.837	Chrysemys_picta_bellii
ENSSHAG00000008992	-	79	77.632	ENSDNOG00000043454	-	51	77.632	Dasypus_novemcinctus
ENSSHAG00000008992	-	100	86.316	ENSEBUG00000013374	-	79	86.316	Eptatretus_burgeri
ENSSHAG00000008992	-	98	83.871	ENSECAG00000035617	-	54	85.714	Equus_caballus
ENSSHAG00000008992	-	100	85.263	ENSFALG00000009186	-	76	85.263	Ficedula_albicollis
ENSSHAG00000008992	-	100	85.263	ENSGALG00000038930	-	54	85.263	Gallus_gallus
ENSSHAG00000008992	-	99	80.851	ENSGAGG00000016824	-	61	68.421	Gopherus_agassizii
ENSSHAG00000008992	-	66	80.328	ENSGAGG00000002125	-	66	80.328	Gopherus_agassizii
ENSSHAG00000008992	-	97	65.217	ENSLACG00000016312	-	75	65.217	Latimeria_chalumnae
ENSSHAG00000008992	-	83	71.053	ENSLACG00000002119	-	80	71.053	Latimeria_chalumnae
ENSSHAG00000008992	-	79	75.342	ENSLOCG00000017522	-	79	75.342	Lepisosteus_oculatus
ENSSHAG00000008992	-	100	83.158	MGP_CAROLIEiJ_G0032305	Celf6	55	84.946	Mus_caroli
ENSSHAG00000008992	-	82	84.615	MGP_CAROLIEiJ_G0015643	-	72	41.791	Mus_caroli
ENSSHAG00000008992	-	100	83.158	ENSMUSG00000032297	Celf6	55	84.946	Mus_musculus
ENSSHAG00000008992	-	82	84.615	MGP_PahariEiJ_G0031056	-	72	41.791	Mus_pahari
ENSSHAG00000008992	-	100	83.158	MGP_PahariEiJ_G0015171	Celf6	55	84.946	Mus_pahari
ENSSHAG00000008992	-	100	83.158	MGP_SPRETEiJ_G0033445	Celf6	55	84.946	Mus_spretus
ENSSHAG00000008992	-	81	87.013	ENSONIG00000004856	celf5a	58	87.013	Oreochromis_niloticus
ENSSHAG00000008992	-	72	42.647	ENSOANG00000009501	-	65	42.647	Ornithorhynchus_anatinus
ENSSHAG00000008992	-	98	83.871	ENSPTIG00000005511	-	57	89.412	Panthera_tigris_altaica
ENSSHAG00000008992	-	72	42.647	ENSPKIG00000024672	-	52	42.647	Paramormyrops_kingsleyae
ENSSHAG00000008992	-	100	78.947	ENSPSIG00000015573	-	76	78.947	Pelodiscus_sinensis
ENSSHAG00000008992	-	78	73.333	ENSPFOG00000024694	-	76	73.333	Poecilia_formosa
ENSSHAG00000008992	-	100	86.598	ENSRNOG00000049802	AABR07031533.1	58	86.598	Rattus_norvegicus
ENSSHAG00000008992	-	100	86.316	ENSSPAG00000007933	-	70	86.316	Stegastes_partitus
ENSSHAG00000008992	-	100	85.263	ENSTGUG00000001647	-	77	85.263	Taeniopygia_guttata
ENSSHAG00000008992	-	84	72.840	ENSUAMG00000025536	-	63	72.840	Ursus_americanus
ENSSHAG00000008992	-	98	83.871	ENSUAMG00000025727	-	54	85.714	Ursus_americanus
ENSSHAG00000008992	-	84	72.840	ENSUMAG00000002210	-	63	72.840	Ursus_maritimus
ENSSHAG00000008992	-	98	83.871	ENSVVUG00000018268	-	64	83.871	Vulpes_vulpes