EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000009241 (Gene tree)
Gene ID: 100925967
Gene Symbol: SWT1
Alias: C1orf26|FLJ20121|HsSwt1
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 126569 bases
Position: chrGL856758.1:521132-647700
Accession: 100925967
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000010716	PIN_4	PF13638.6	1.3e-26	1	1
ENSSHAP00000010715	PIN_4	PF13638.6	1.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000010809	SWT1-201	2769	-	ENSSHAP00000010715	919 (aa)	XP_012403192	G3W5L0
ENSSHAT00000010810	SWT1-202	2757	-	ENSSHAP00000010716	827 (aa)	-	G3W5L1

Gene Model

Click here to download ENSSHAG00000009241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000009241's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000009241	SWT1	99	59.892	ENSG00000116668	SWT1	99	59.892	Homo_sapiens
ENSSHAG00000009241	SWT1	62	34.761	ENSAPOG00000014897	-	60	34.926	Acanthochromis_polyacanthus
ENSSHAG00000009241	SWT1	97	59.586	ENSAMEG00000013585	SWT1	100	59.677	Ailuropoda_melanoleuca
ENSSHAG00000009241	SWT1	60	35.274	ENSAOCG00000013932	swt1	58	35.616	Amphiprion_ocellaris
ENSSHAG00000009241	SWT1	60	35.274	ENSAPEG00000009613	-	58	35.616	Amphiprion_percula
ENSSHAG00000009241	SWT1	61	36.054	ENSATEG00000018946	swt1	57	36.054	Anabas_testudineus
ENSSHAG00000009241	SWT1	78	48.422	ENSAPLG00000008607	SWT1	99	47.340	Anas_platyrhynchos
ENSSHAG00000009241	SWT1	67	48.293	ENSACAG00000002276	SWT1	69	48.293	Anolis_carolinensis
ENSSHAG00000009241	SWT1	99	59.570	ENSANAG00000027068	SWT1	99	59.677	Aotus_nancymaae
ENSSHAG00000009241	SWT1	62	34.004	ENSACLG00000009742	swt1	71	33.890	Astatotilapia_calliptera
ENSSHAG00000009241	SWT1	62	38.632	ENSAMXG00000010971	swt1	58	38.632	Astyanax_mexicanus
ENSSHAG00000009241	SWT1	80	52.545	ENSBTAG00000004492	SWT1	99	54.148	Bos_taurus
ENSSHAG00000009241	SWT1	99	58.861	ENSCJAG00000005544	SWT1	100	58.969	Callithrix_jacchus
ENSSHAG00000009241	SWT1	99	60.799	ENSCAFG00000013543	SWT1	98	61.015	Canis_familiaris
ENSSHAG00000009241	SWT1	99	59.402	ENSCAFG00020015648	SWT1	99	61.768	Canis_lupus_dingo
ENSSHAG00000009241	SWT1	88	62.149	ENSCHIG00000023511	SWT1	100	71.953	Capra_hircus
ENSSHAG00000009241	SWT1	99	60.280	ENSTSYG00000010470	SWT1	100	60.430	Carlito_syrichta
ENSSHAG00000009241	SWT1	100	56.802	ENSCPOG00000014251	SWT1	100	56.863	Cavia_porcellus
ENSSHAG00000009241	SWT1	99	59.892	ENSCCAG00000033926	SWT1	99	59.785	Cebus_capucinus
ENSSHAG00000009241	SWT1	99	60.129	ENSCATG00000042210	SWT1	99	71.692	Cercocebus_atys
ENSSHAG00000009241	SWT1	99	58.423	ENSCLAG00000013959	SWT1	99	58.089	Chinchilla_lanigera
ENSSHAG00000009241	SWT1	99	60.236	ENSCSAG00000012895	SWT1	99	60.129	Chlorocebus_sabaeus
ENSSHAG00000009241	SWT1	59	78.125	ENSCHOG00000002211	-	61	78.125	Choloepus_hoffmanni
ENSSHAG00000009241	SWT1	93	47.821	ENSCPBG00000015691	SWT1	99	47.249	Chrysemys_picta_bellii
ENSSHAG00000009241	SWT1	99	60.215	ENSCANG00000032207	SWT1	99	71.886	Colobus_angolensis_palliatus
ENSSHAG00000009241	SWT1	99	58.324	ENSCGRG00001022955	Swt1	100	57.605	Cricetulus_griseus_chok1gshd
ENSSHAG00000009241	SWT1	99	58.324	ENSCGRG00000010224	Swt1	100	58.324	Cricetulus_griseus_crigri
ENSSHAG00000009241	SWT1	61	34.281	ENSCSEG00000017352	swt1	75	34.281	Cynoglossus_semilaevis
ENSSHAG00000009241	SWT1	62	38.927	ENSDARG00000094010	swt1	57	38.927	Danio_rerio
ENSSHAG00000009241	SWT1	100	55.071	ENSDNOG00000005254	SWT1	100	55.189	Dasypus_novemcinctus
ENSSHAG00000009241	SWT1	86	61.529	ENSDORG00000010531	Swt1	92	60.777	Dipodomys_ordii
ENSSHAG00000009241	SWT1	95	58.020	ENSEASG00005005530	SWT1	98	58.246	Equus_asinus_asinus
ENSSHAG00000009241	SWT1	92	60.234	ENSECAG00000012085	SWT1	99	60.234	Equus_caballus
ENSSHAG00000009241	SWT1	85	74.713	ENSEEUG00000003664	SWT1	88	74.713	Erinaceus_europaeus
ENSSHAG00000009241	SWT1	66	37.209	ENSELUG00000020565	swt1	62	37.209	Esox_lucius
ENSSHAG00000009241	SWT1	99	61.356	ENSFCAG00000011286	SWT1	100	61.356	Felis_catus
ENSSHAG00000009241	SWT1	66	50.555	ENSFALG00000003206	SWT1	70	50.555	Ficedula_albicollis
ENSSHAG00000009241	SWT1	99	57.849	ENSFDAG00000007569	SWT1	100	57.618	Fukomys_damarensis
ENSSHAG00000009241	SWT1	91	45.116	ENSGALG00000034230	SWT1	96	45.116	Gallus_gallus
ENSSHAG00000009241	SWT1	60	34.188	ENSGAFG00000007803	-	58	34.188	Gambusia_affinis
ENSSHAG00000009241	SWT1	81	48.340	ENSGAGG00000025050	SWT1	99	56.485	Gopherus_agassizii
ENSSHAG00000009241	SWT1	57	72.296	ENSGGOG00000041167	-	95	72.296	Gorilla_gorilla
ENSSHAG00000009241	SWT1	64	33.227	ENSHBUG00000006188	swt1	71	33.387	Haplochromis_burtoni
ENSSHAG00000009241	SWT1	92	60.255	ENSHGLG00000006542	SWT1	97	60.023	Heterocephalus_glaber_female
ENSSHAG00000009241	SWT1	99	59.175	ENSHGLG00100014408	SWT1	99	58.958	Heterocephalus_glaber_male
ENSSHAG00000009241	SWT1	62	35.017	ENSIPUG00000009113	-	58	35.017	Ictalurus_punctatus
ENSSHAG00000009241	SWT1	99	60.086	ENSSTOG00000010356	SWT1	100	59.763	Ictidomys_tridecemlineatus
ENSSHAG00000009241	SWT1	99	55.927	ENSJJAG00000015927	Swt1	100	55.508	Jaculus_jaculus
ENSSHAG00000009241	SWT1	60	35.871	ENSKMAG00000012533	swt1	57	35.871	Kryptolebias_marmoratus
ENSSHAG00000009241	SWT1	60	35.714	ENSLBEG00000020663	-	57	35.714	Labrus_bergylta
ENSSHAG00000009241	SWT1	71	47.806	ENSLACG00000009194	SWT1	85	50.580	Latimeria_chalumnae
ENSSHAG00000009241	SWT1	60	43.262	ENSLOCG00000001749	swt1	97	42.058	Lepisosteus_oculatus
ENSSHAG00000009241	SWT1	64	73.154	ENSLAFG00000004346	-	100	73.154	Loxodonta_africana
ENSSHAG00000009241	SWT1	99	59.700	ENSMFAG00000031793	SWT1	99	71.669	Macaca_fascicularis
ENSSHAG00000009241	SWT1	99	57.811	ENSMMUG00000013882	SWT1	99	69.153	Macaca_mulatta
ENSSHAG00000009241	SWT1	99	59.700	ENSMNEG00000035502	SWT1	99	71.501	Macaca_nemestrina
ENSSHAG00000009241	SWT1	99	60.108	ENSMLEG00000038692	SWT1	99	71.692	Mandrillus_leucophaeus
ENSSHAG00000009241	SWT1	64	34.087	ENSMZEG00005018489	swt1	71	33.926	Maylandia_zebra
ENSSHAG00000009241	SWT1	62	53.979	ENSMGAG00000000973	SWT1	96	53.979	Meleagris_gallopavo
ENSSHAG00000009241	SWT1	100	52.038	ENSMAUG00000007996	Swt1	97	52.268	Mesocricetus_auratus
ENSSHAG00000009241	SWT1	99	60.860	ENSMICG00000014975	SWT1	100	61.075	Microcebus_murinus
ENSSHAG00000009241	SWT1	99	56.821	ENSMOCG00000009776	Swt1	98	56.606	Microtus_ochrogaster
ENSSHAG00000009241	SWT1	100	80.475	ENSMODG00000007472	SWT1	100	80.475	Monodelphis_domestica
ENSSHAG00000009241	SWT1	66	35.156	ENSMALG00000019308	swt1	63	35.156	Monopterus_albus
ENSSHAG00000009241	SWT1	99	56.850	MGP_CAROLIEiJ_G0014692	Swt1	99	57.481	Mus_caroli
ENSSHAG00000009241	SWT1	99	55.987	ENSMUSG00000052748	Swt1	98	56.250	Mus_musculus
ENSSHAG00000009241	SWT1	99	56.652	MGP_PahariEiJ_G0027928	Swt1	98	57.158	Mus_pahari
ENSSHAG00000009241	SWT1	99	56.742	MGP_SPRETEiJ_G0015499	Swt1	98	57.004	Mus_spretus
ENSSHAG00000009241	SWT1	99	59.698	ENSMPUG00000011913	SWT1	100	59.914	Mustela_putorius_furo
ENSSHAG00000009241	SWT1	99	58.026	ENSMLUG00000001142	SWT1	97	58.134	Myotis_lucifugus
ENSSHAG00000009241	SWT1	99	58.297	ENSNGAG00000021080	Swt1	98	58.836	Nannospalax_galili
ENSSHAG00000009241	SWT1	99	60.000	ENSNLEG00000018031	SWT1	99	59.892	Nomascus_leucogenys
ENSSHAG00000009241	SWT1	100	62.486	ENSMEUG00000000236	-	100	62.486	Notamacropus_eugenii
ENSSHAG00000009241	SWT1	88	56.840	ENSOPRG00000000692	SWT1	81	56.840	Ochotona_princeps
ENSSHAG00000009241	SWT1	60	34.884	ENSONIG00000009994	swt1	100	34.629	Oreochromis_niloticus
ENSSHAG00000009241	SWT1	85	59.645	ENSOANG00000001013	-	98	59.645	Ornithorhynchus_anatinus
ENSSHAG00000009241	SWT1	99	54.887	ENSOCUG00000004901	SWT1	99	54.672	Oryctolagus_cuniculus
ENSSHAG00000009241	SWT1	60	34.576	ENSORLG00000009682	swt1	58	34.576	Oryzias_latipes
ENSSHAG00000009241	SWT1	60	34.635	ENSORLG00020011654	swt1	59	34.635	Oryzias_latipes_hni
ENSSHAG00000009241	SWT1	60	34.465	ENSORLG00015007734	swt1	59	34.465	Oryzias_latipes_hsok
ENSSHAG00000009241	SWT1	60	35.294	ENSOMEG00000006607	swt1	57	35.294	Oryzias_melastigma
ENSSHAG00000009241	SWT1	99	58.925	ENSOGAG00000016195	SWT1	100	58.602	Otolemur_garnettii
ENSSHAG00000009241	SWT1	99	59.634	ENSOARG00000004156	SWT1	98	59.547	Ovis_aries
ENSSHAG00000009241	SWT1	99	59.892	ENSPPAG00000021400	SWT1	99	59.892	Pan_paniscus
ENSSHAG00000009241	SWT1	99	61.249	ENSPPRG00000023754	SWT1	100	61.572	Panthera_pardus
ENSSHAG00000009241	SWT1	99	61.141	ENSPTIG00000021889	SWT1	100	61.464	Panthera_tigris_altaica
ENSSHAG00000009241	SWT1	99	59.677	ENSPTRG00000001777	SWT1	99	59.677	Pan_troglodytes
ENSSHAG00000009241	SWT1	99	59.593	ENSPANG00000005099	SWT1	99	71.022	Papio_anubis
ENSSHAG00000009241	SWT1	68	34.472	ENSPKIG00000005979	swt1	63	34.477	Paramormyrops_kingsleyae
ENSSHAG00000009241	SWT1	96	46.809	ENSPSIG00000008961	SWT1	99	46.336	Pelodiscus_sinensis
ENSSHAG00000009241	SWT1	99	58.342	ENSPEMG00000008208	Swt1	98	57.696	Peromyscus_maniculatus_bairdii
ENSSHAG00000009241	SWT1	100	83.778	ENSPCIG00000002443	SWT1	100	93.182	Phascolarctos_cinereus
ENSSHAG00000009241	SWT1	60	34.412	ENSPFOG00000010988	-	69	33.278	Poecilia_formosa
ENSSHAG00000009241	SWT1	60	34.583	ENSPLAG00000022908	-	58	34.583	Poecilia_latipinna
ENSSHAG00000009241	SWT1	60	34.412	ENSPMEG00000006943	-	58	34.412	Poecilia_mexicana
ENSSHAG00000009241	SWT1	99	59.355	ENSPPYG00000000415	SWT1	99	59.247	Pongo_abelii
ENSSHAG00000009241	SWT1	85	72.093	ENSPCAG00000008337	SWT1	87	68.217	Procavia_capensis
ENSSHAG00000009241	SWT1	69	84.615	ENSPCOG00000018195	-	95	84.615	Propithecus_coquereli
ENSSHAG00000009241	SWT1	79	61.781	ENSPVAG00000005968	SWT1	80	61.611	Pteropus_vampyrus
ENSSHAG00000009241	SWT1	64	33.760	ENSPNYG00000012934	swt1	71	33.926	Pundamilia_nyererei
ENSSHAG00000009241	SWT1	74	35.530	ENSPNAG00000017795	swt1	61	37.013	Pygocentrus_nattereri
ENSSHAG00000009241	SWT1	99	57.051	ENSRNOG00000032258	Swt1	98	57.883	Rattus_norvegicus
ENSSHAG00000009241	SWT1	99	57.912	ENSRBIG00000040630	SWT1	99	69.309	Rhinopithecus_bieti
ENSSHAG00000009241	SWT1	74	57.987	ENSRROG00000028596	SWT1	100	56.662	Rhinopithecus_roxellana
ENSSHAG00000009241	SWT1	99	59.871	ENSSBOG00000028825	SWT1	99	59.979	Saimiri_boliviensis_boliviensis
ENSSHAG00000009241	SWT1	62	39.583	ENSSFOG00015004895	swt1	57	39.583	Scleropages_formosus
ENSSHAG00000009241	SWT1	60	35.334	ENSSDUG00000012345	swt1	58	35.334	Seriola_dumerili
ENSSHAG00000009241	SWT1	60	35.334	ENSSLDG00000003821	swt1	58	35.334	Seriola_lalandi_dorsalis
ENSSHAG00000009241	SWT1	55	49.119	ENSSARG00000011524	-	87	49.119	Sorex_araneus
ENSSHAG00000009241	SWT1	96	45.861	ENSSPUG00000003899	SWT1	98	45.536	Sphenodon_punctatus
ENSSHAG00000009241	SWT1	94	62.586	ENSSSCG00000015569	SWT1	100	61.422	Sus_scrofa
ENSSHAG00000009241	SWT1	61	53.805	ENSTGUG00000003718	-	100	53.805	Taeniopygia_guttata
ENSSHAG00000009241	SWT1	60	34.790	ENSTRUG00000006420	swt1	61	34.790	Takifugu_rubripes
ENSSHAG00000009241	SWT1	54	88.710	ENSTBEG00000016891	-	54	88.710	Tupaia_belangeri
ENSSHAG00000009241	SWT1	99	58.450	ENSTTRG00000005914	SWT1	100	58.450	Tursiops_truncatus
ENSSHAG00000009241	SWT1	99	59.164	ENSUAMG00000020937	SWT1	99	61.268	Ursus_americanus
ENSSHAG00000009241	SWT1	99	59.807	ENSUMAG00000021918	SWT1	100	59.807	Ursus_maritimus
ENSSHAG00000009241	SWT1	92	69.142	ENSVPAG00000011855	SWT1	92	69.142	Vicugna_pacos
ENSSHAG00000009241	SWT1	99	60.818	ENSVVUG00000009182	SWT1	100	61.033	Vulpes_vulpes
ENSSHAG00000009241	SWT1	60	34.583	ENSXMAG00000023472	-	59	33.782	Xiphophorus_maculatus