EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000009257 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 207928 bases
Position: chrGL841535.1:522654-730581
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000010737	Fox-1_C	PF12414.8	2.5e-43	1	1
ENSSHAP00000010736	Fox-1_C	PF12414.8	2.8e-39	1	1
ENSSHAP00000010736	RRM_1	PF00076.22	8.8e-19	1	1
ENSSHAP00000010737	RRM_1	PF00076.22	2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000010830	RBFOX1-201	3786	-	ENSSHAP00000010736	328 (aa)	-	G3W5N1
ENSSHAT00000010831	RBFOX1-202	3784	-	ENSSHAP00000010737	397 (aa)	-	G3W5N2

Gene Model

Click here to download ENSSHAG00000009257's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000009257's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000009257	RBFOX1	98	65.517	ENSSHAG00000006835	RBFOX2	96	64.078
ENSSHAG00000009257	RBFOX1	98	68.905	ENSSHAG00000016076	RBFOX3	99	69.403

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000009257	RBFOX1	100	92.443	ENSG00000078328	RBFOX1	100	92.443	Homo_sapiens
ENSSHAG00000009257	RBFOX1	100	75.904	ENSAPOG00000003197	rbfox1	100	75.663	Acanthochromis_polyacanthus
ENSSHAG00000009257	RBFOX1	63	96.585	ENSAMEG00000008605	RBFOX1	89	94.170	Ailuropoda_melanoleuca
ENSSHAG00000009257	RBFOX1	55	87.845	ENSACIG00000005478	rbfox1	68	65.203	Amphilophus_citrinellus
ENSSHAG00000009257	RBFOX1	76	79.775	ENSAOCG00000008283	rbfox1	91	79.401	Amphiprion_ocellaris
ENSSHAG00000009257	RBFOX1	95	70.185	ENSAPEG00000010636	rbfox1	100	70.079	Amphiprion_percula
ENSSHAG00000009257	RBFOX1	76	78.439	ENSATEG00000007513	rbfox1	91	78.067	Anabas_testudineus
ENSSHAG00000009257	RBFOX1	99	92.112	ENSAPLG00000013263	RBFOX1	98	92.112	Anas_platyrhynchos
ENSSHAG00000009257	RBFOX1	99	86.717	ENSACAG00000004013	RBFOX1	100	86.717	Anolis_carolinensis
ENSSHAG00000009257	RBFOX1	98	91.260	ENSANAG00000029527	RBFOX1	97	91.260	Aotus_nancymaae
ENSSHAG00000009257	RBFOX1	63	92.683	ENSAMXG00000002431	rbfox1	64	89.189	Astyanax_mexicanus
ENSSHAG00000009257	RBFOX1	100	89.859	ENSBTAG00000007210	RBFOX1	97	91.260	Bos_taurus
ENSSHAG00000009257	RBFOX1	98	92.821	ENSCJAG00000017351	RBFOX1	94	92.821	Callithrix_jacchus
ENSSHAG00000009257	RBFOX1	100	90.704	ENSCAFG00000019082	RBFOX1	94	91.560	Canis_familiaris
ENSSHAG00000009257	RBFOX1	100	76.056	ENSCAFG00020024881	RBFOX1	75	92.884	Canis_lupus_dingo
ENSSHAG00000009257	RBFOX1	100	90.423	ENSCHIG00000023549	RBFOX1	97	91.774	Capra_hircus
ENSSHAG00000009257	RBFOX1	98	91.260	ENSTSYG00000005334	RBFOX1	100	91.260	Carlito_syrichta
ENSSHAG00000009257	RBFOX1	98	93.041	ENSCAPG00000017669	RBFOX1	100	93.041	Cavia_aperea
ENSSHAG00000009257	RBFOX1	100	91.688	ENSCPOG00000011314	RBFOX1	99	93.041	Cavia_porcellus
ENSSHAG00000009257	RBFOX1	98	90.793	ENSCCAG00000023031	RBFOX1	97	89.487	Cebus_capucinus
ENSSHAG00000009257	RBFOX1	100	90.423	ENSCATG00000033816	RBFOX1	97	90.000	Cercocebus_atys
ENSSHAG00000009257	RBFOX1	100	91.436	ENSCLAG00000012761	RBFOX1	100	91.436	Chinchilla_lanigera
ENSSHAG00000009257	RBFOX1	100	88.169	ENSCSAG00000008739	RBFOX1	94	88.169	Chlorocebus_sabaeus
ENSSHAG00000009257	RBFOX1	98	69.152	ENSCHOG00000012843	RBFOX1	93	69.152	Choloepus_hoffmanni
ENSSHAG00000009257	RBFOX1	98	92.839	ENSCPBG00000026626	RBFOX1	99	90.201	Chrysemys_picta_bellii
ENSSHAG00000009257	RBFOX1	98	91.304	ENSCANG00000033125	RBFOX1	97	90.000	Colobus_angolensis_palliatus
ENSSHAG00000009257	RBFOX1	100	91.940	ENSCGRG00001013729	Rbfox1	100	91.940	Cricetulus_griseus_chok1gshd
ENSSHAG00000009257	RBFOX1	100	91.940	ENSCGRG00000003272	Rbfox1	100	91.940	Cricetulus_griseus_crigri
ENSSHAG00000009257	RBFOX1	95	71.788	ENSCSEG00000008840	rbfox1	100	71.788	Cynoglossus_semilaevis
ENSSHAG00000009257	RBFOX1	100	81.156	ENSDARG00000014746	rbfox1	100	91.880	Danio_rerio
ENSSHAG00000009257	RBFOX1	98	92.821	ENSDNOG00000043612	RBFOX1	94	92.821	Dasypus_novemcinctus
ENSSHAG00000009257	RBFOX1	99	90.404	ENSDORG00000010024	Rbfox1	97	91.049	Dipodomys_ordii
ENSSHAG00000009257	RBFOX1	98	74.425	ENSETEG00000003771	RBFOX1	94	74.425	Echinops_telfairi
ENSSHAG00000009257	RBFOX1	98	94.072	ENSEASG00005011599	RBFOX1	97	92.031	Equus_asinus_asinus
ENSSHAG00000009257	RBFOX1	100	90.423	ENSECAG00000012667	RBFOX1	91	91.270	Equus_caballus
ENSSHAG00000009257	RBFOX1	84	66.390	ENSELUG00000013096	rbfox1	99	65.975	Esox_lucius
ENSSHAG00000009257	RBFOX1	98	93.814	ENSFCAG00000025322	RBFOX1	89	93.814	Felis_catus
ENSSHAG00000009257	RBFOX1	87	86.538	ENSFALG00000004027	RBFOX1	100	90.390	Ficedula_albicollis
ENSSHAG00000009257	RBFOX1	100	92.191	ENSFDAG00000007388	RBFOX1	100	92.191	Fukomys_damarensis
ENSSHAG00000009257	RBFOX1	100	95.122	ENSGALG00000034325	RBFOX1	94	90.026	Gallus_gallus
ENSSHAG00000009257	RBFOX1	100	89.296	ENSGAGG00000023681	RBFOX1	100	93.103	Gopherus_agassizii
ENSSHAG00000009257	RBFOX1	98	91.304	ENSGGOG00000016871	-	100	88.161	Gorilla_gorilla
ENSSHAG00000009257	RBFOX1	100	91.940	ENSHGLG00000016944	RBFOX1	100	91.940	Heterocephalus_glaber_female
ENSSHAG00000009257	RBFOX1	100	91.940	ENSHGLG00100003272	RBFOX1	100	91.940	Heterocephalus_glaber_male
ENSSHAG00000009257	RBFOX1	89	74.917	ENSHCOG00000016419	rbfox1	91	70.605	Hippocampus_comes
ENSSHAG00000009257	RBFOX1	100	88.720	ENSIPUG00000015215	rbfox1	100	85.146	Ictalurus_punctatus
ENSSHAG00000009257	RBFOX1	100	91.940	ENSSTOG00000000322	RBFOX1	100	91.940	Ictidomys_tridecemlineatus
ENSSHAG00000009257	RBFOX1	100	89.169	ENSJJAG00000002575	Rbfox1	100	89.169	Jaculus_jaculus
ENSSHAG00000009257	RBFOX1	99	72.549	ENSLBEG00000014659	rbfox1	97	73.724	Labrus_bergylta
ENSSHAG00000009257	RBFOX1	98	88.550	ENSLOCG00000006675	rbfox1	99	88.550	Lepisosteus_oculatus
ENSSHAG00000009257	RBFOX1	77	93.182	ENSLAFG00000011480	RBFOX1	100	93.182	Loxodonta_africana
ENSSHAG00000009257	RBFOX1	98	91.049	ENSMFAG00000036447	RBFOX1	97	89.744	Macaca_fascicularis
ENSSHAG00000009257	RBFOX1	99	91.392	ENSMMUG00000003458	RBFOX1	99	91.392	Macaca_mulatta
ENSSHAG00000009257	RBFOX1	100	95.427	ENSMNEG00000032034	RBFOX1	94	91.049	Macaca_nemestrina
ENSSHAG00000009257	RBFOX1	98	91.304	ENSMLEG00000015382	RBFOX1	97	90.000	Mandrillus_leucophaeus
ENSSHAG00000009257	RBFOX1	95	75.000	ENSMAMG00000003142	rbfox1	100	75.510	Mastacembelus_armatus
ENSSHAG00000009257	RBFOX1	74	87.732	ENSMGAG00000008606	RBFOX1	95	89.493	Meleagris_gallopavo
ENSSHAG00000009257	RBFOX1	99	53.030	ENSMAUG00000020570	Rbfox1	99	51.768	Mesocricetus_auratus
ENSSHAG00000009257	RBFOX1	100	89.859	ENSMICG00000034286	RBFOX1	97	89.487	Microcebus_murinus
ENSSHAG00000009257	RBFOX1	100	91.940	ENSMOCG00000020932	Rbfox1	100	93.229	Microtus_ochrogaster
ENSSHAG00000009257	RBFOX1	89	76.949	ENSMMOG00000009716	rbfox1	86	71.976	Mola_mola
ENSSHAG00000009257	RBFOX1	100	89.859	ENSMODG00000005826	RBFOX1	100	89.859	Monodelphis_domestica
ENSSHAG00000009257	RBFOX1	100	75.795	ENSMALG00000003337	rbfox1	100	75.795	Monopterus_albus
ENSSHAG00000009257	RBFOX1	100	92.191	MGP_CAROLIEiJ_G0020427	Rbfox1	100	92.191	Mus_caroli
ENSSHAG00000009257	RBFOX1	100	91.940	ENSMUSG00000008658	Rbfox1	100	91.940	Mus_musculus
ENSSHAG00000009257	RBFOX1	100	92.191	MGP_PahariEiJ_G0016135	Rbfox1	100	92.191	Mus_pahari
ENSSHAG00000009257	RBFOX1	100	91.688	MGP_SPRETEiJ_G0021321	Rbfox1	100	91.688	Mus_spretus
ENSSHAG00000009257	RBFOX1	100	87.887	ENSMPUG00000014822	RBFOX1	90	87.887	Mustela_putorius_furo
ENSSHAG00000009257	RBFOX1	77	93.811	ENSMLUG00000015896	RBFOX1	100	93.811	Myotis_lucifugus
ENSSHAG00000009257	RBFOX1	100	93.199	ENSNGAG00000023276	Rbfox1	100	94.072	Nannospalax_galili
ENSSHAG00000009257	RBFOX1	97	61.557	ENSNBRG00000011084	rbfox1	94	61.259	Neolamprologus_brichardi
ENSSHAG00000009257	RBFOX1	98	91.049	ENSNLEG00000010017	-	97	89.744	Nomascus_leucogenys
ENSSHAG00000009257	RBFOX1	98	76.215	ENSMEUG00000012525	RBFOX1	94	76.215	Notamacropus_eugenii
ENSSHAG00000009257	RBFOX1	98	72.379	ENSOPRG00000006199	-	94	72.379	Ochotona_princeps
ENSSHAG00000009257	RBFOX1	100	91.184	ENSODEG00000013166	RBFOX1	100	91.184	Octodon_degus
ENSSHAG00000009257	RBFOX1	100	89.014	ENSOANG00000002379	RBFOX1	94	89.014	Ornithorhynchus_anatinus
ENSSHAG00000009257	RBFOX1	63	96.098	ENSOCUG00000001205	-	100	92.889	Oryctolagus_cuniculus
ENSSHAG00000009257	RBFOX1	98	93.557	ENSOGAG00000025535	RBFOX1	98	93.557	Otolemur_garnettii
ENSSHAG00000009257	RBFOX1	63	84.390	ENSOARG00000005135	RBFOX1	98	79.757	Ovis_aries
ENSSHAG00000009257	RBFOX1	98	93.814	ENSPPAG00000036238	-	100	93.814	Pan_paniscus
ENSSHAG00000009257	RBFOX1	98	91.304	ENSPPRG00000006546	RBFOX1	97	90.000	Panthera_pardus
ENSSHAG00000009257	RBFOX1	100	81.108	ENSPTIG00000021154	RBFOX1	99	81.491	Panthera_tigris_altaica
ENSSHAG00000009257	RBFOX1	98	91.304	ENSPTRG00000007744	RBFOX1	100	88.161	Pan_troglodytes
ENSSHAG00000009257	RBFOX1	98	91.304	ENSPANG00000026500	RBFOX1	97	90.000	Papio_anubis
ENSSHAG00000009257	RBFOX1	100	89.394	ENSPKIG00000009667	-	95	90.000	Paramormyrops_kingsleyae
ENSSHAG00000009257	RBFOX1	77	95.238	ENSPKIG00000019353	rbfox1	82	95.238	Paramormyrops_kingsleyae
ENSSHAG00000009257	RBFOX1	98	93.299	ENSPSIG00000006523	RBFOX1	97	93.299	Pelodiscus_sinensis
ENSSHAG00000009257	RBFOX1	100	92.191	ENSPEMG00000017607	Rbfox1	100	92.191	Peromyscus_maniculatus_bairdii
ENSSHAG00000009257	RBFOX1	73	89.310	ENSPCIG00000026887	RBFOX1	100	89.310	Phascolarctos_cinereus
ENSSHAG00000009257	RBFOX1	100	88.169	ENSPPYG00000007079	-	90	88.169	Pongo_abelii
ENSSHAG00000009257	RBFOX1	88	82.336	ENSPCAG00000002630	RBFOX1	93	82.336	Procavia_capensis
ENSSHAG00000009257	RBFOX1	98	90.793	ENSPCOG00000025687	RBFOX1	97	89.487	Propithecus_coquereli
ENSSHAG00000009257	RBFOX1	98	87.212	ENSPVAG00000013467	RBFOX1	94	87.212	Pteropus_vampyrus
ENSSHAG00000009257	RBFOX1	95	82.576	ENSPNAG00000023109	rbfox1	100	82.576	Pygocentrus_nattereri
ENSSHAG00000009257	RBFOX1	98	92.821	ENSRNOG00000002827	Rbfox1	93	93.299	Rattus_norvegicus
ENSSHAG00000009257	RBFOX1	98	93.814	ENSRBIG00000044478	RBFOX1	100	93.814	Rhinopithecus_bieti
ENSSHAG00000009257	RBFOX1	100	90.423	ENSRROG00000044411	RBFOX1	97	90.000	Rhinopithecus_roxellana
ENSSHAG00000009257	RBFOX1	98	93.299	ENSSBOG00000033726	RBFOX1	97	93.299	Saimiri_boliviensis_boliviensis
ENSSHAG00000009257	RBFOX1	89	76.080	ENSSFOG00015009955	-	86	69.565	Scleropages_formosus
ENSSHAG00000009257	RBFOX1	79	91.954	ENSSFOG00015023675	rbfox1	92	91.954	Scleropages_formosus
ENSSHAG00000009257	RBFOX1	98	77.284	ENSSMAG00000015505	rbfox1	95	75.120	Scophthalmus_maximus
ENSSHAG00000009257	RBFOX1	99	74.055	ENSSDUG00000016413	rbfox1	100	73.804	Seriola_dumerili
ENSSHAG00000009257	RBFOX1	89	77.027	ENSSLDG00000009353	rbfox1	97	70.833	Seriola_lalandi_dorsalis
ENSSHAG00000009257	RBFOX1	89	90.203	ENSSPUG00000009732	RBFOX1	93	82.687	Sphenodon_punctatus
ENSSHAG00000009257	RBFOX1	98	76.601	ENSSPAG00000009723	rbfox1	100	76.355	Stegastes_partitus
ENSSHAG00000009257	RBFOX1	100	89.859	ENSSSCG00000007917	RBFOX1	100	87.606	Sus_scrofa
ENSSHAG00000009257	RBFOX1	98	93.299	ENSTGUG00000004562	RBFOX1	99	93.299	Taeniopygia_guttata
ENSSHAG00000009257	RBFOX1	98	76.790	ENSTRUG00000020940	rbfox1	99	76.790	Takifugu_rubripes
ENSSHAG00000009257	RBFOX1	68	57.778	ENSTNIG00000002567	rbfox1	100	59.554	Tetraodon_nigroviridis
ENSSHAG00000009257	RBFOX1	52	99.259	ENSTBEG00000009169	-	74	68.182	Tupaia_belangeri
ENSSHAG00000009257	RBFOX1	98	90.793	ENSTTRG00000005700	RBFOX1	94	90.793	Tursiops_truncatus
ENSSHAG00000009257	RBFOX1	100	92.683	ENSUAMG00000024633	RBFOX1	99	88.041	Ursus_americanus
ENSSHAG00000009257	RBFOX1	100	82.012	ENSUMAG00000003579	RBFOX1	99	78.880	Ursus_maritimus
ENSSHAG00000009257	RBFOX1	77	90.909	ENSVPAG00000001284	RBFOX1	74	90.909	Vicugna_pacos
ENSSHAG00000009257	RBFOX1	98	93.814	ENSVVUG00000017311	RBFOX1	89	93.814	Vulpes_vulpes