EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000009307 (Gene tree)
Gene ID: -
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 12841 bases
Position: chrGL856873.1:528843-541683
Accession: 21642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000010796	tRNA-synt_1g	PF09334.11	9.2e-17	1	1
ENSSHAP00000010796	Anticodon_1	PF08264.13	3.1e-30	1	1
ENSSHAP00000010796	tRNA-synt_1	PF00133.22	7.5e-184	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000010890	VARS2-201	3168	-	ENSSHAP00000010796	1056 (aa)	-	G3W5U1

Gene Model

Click here to download ENSSHAG00000009307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000009307's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000009307	VARS2	92	51.454	ENSSHAG00000006937	VARS	81	50.193

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000009307	VARS2	93	52.756	ENSAPOG00000007396	vars2	97	51.447	Acanthochromis_polyacanthus
ENSSHAG00000009307	VARS2	99	75.591	ENSAMEG00000012997	VARS2	97	75.591	Ailuropoda_melanoleuca
ENSSHAG00000009307	VARS2	97	50.904	ENSACIG00000004344	vars2	97	50.904	Amphilophus_citrinellus
ENSSHAG00000009307	VARS2	93	52.212	ENSAOCG00000000476	vars2	97	51.072	Amphiprion_ocellaris
ENSSHAG00000009307	VARS2	93	52.114	ENSAPEG00000008646	vars2	95	50.979	Amphiprion_percula
ENSSHAG00000009307	VARS2	93	53.035	ENSATEG00000012291	vars2	99	51.163	Anabas_testudineus
ENSSHAG00000009307	VARS2	96	59.184	ENSACAG00000022093	VARS2	95	59.184	Anolis_carolinensis
ENSSHAG00000009307	VARS2	100	75.024	ENSANAG00000038018	VARS2	99	75.024	Aotus_nancymaae
ENSSHAG00000009307	VARS2	98	50.372	ENSACLG00000018673	vars2	99	50.372	Astatotilapia_calliptera
ENSSHAG00000009307	VARS2	96	51.951	ENSAMXG00000017773	vars2	98	51.158	Astyanax_mexicanus
ENSSHAG00000009307	VARS2	99	76.091	ENSBTAG00000010698	VARS2	99	75.898	Bos_taurus
ENSSHAG00000009307	VARS2	100	75.118	ENSCJAG00000019826	VARS2	99	75.118	Callithrix_jacchus
ENSSHAG00000009307	VARS2	99	75.024	ENSCAFG00000000454	VARS2	99	75.024	Canis_familiaris
ENSSHAG00000009307	VARS2	87	76.982	ENSCAFG00020019387	VARS2	94	77.056	Canis_lupus_dingo
ENSSHAG00000009307	VARS2	99	76.019	ENSCHIG00000007847	VARS2	99	75.898	Capra_hircus
ENSSHAG00000009307	VARS2	100	75.898	ENSTSYG00000009904	VARS2	99	75.898	Carlito_syrichta
ENSSHAG00000009307	VARS2	88	75.027	ENSCAPG00000017770	VARS2	99	75.027	Cavia_aperea
ENSSHAG00000009307	VARS2	99	73.302	ENSCPOG00000021834	VARS2	99	73.302	Cavia_porcellus
ENSSHAG00000009307	VARS2	100	75.213	ENSCCAG00000037907	VARS2	99	75.213	Cebus_capucinus
ENSSHAG00000009307	VARS2	100	75.686	ENSCATG00000032554	VARS2	99	75.686	Cercocebus_atys
ENSSHAG00000009307	VARS2	100	72.899	ENSCLAG00000002889	VARS2	99	72.899	Chinchilla_lanigera
ENSSHAG00000009307	VARS2	100	75.875	ENSCSAG00000008327	VARS2	99	75.875	Chlorocebus_sabaeus
ENSSHAG00000009307	VARS2	91	63.136	ENSCPBG00000021502	VARS2	95	63.136	Chrysemys_picta_bellii
ENSSHAG00000009307	VARS2	100	75.497	ENSCANG00000014991	VARS2	99	75.497	Colobus_angolensis_palliatus
ENSSHAG00000009307	VARS2	99	73.684	ENSCGRG00001021535	Vars2	99	73.440	Cricetulus_griseus_chok1gshd
ENSSHAG00000009307	VARS2	99	73.684	ENSCGRG00000014112	Vars2	99	73.440	Cricetulus_griseus_crigri
ENSSHAG00000009307	VARS2	85	57.210	ENSCSEG00000015432	vars2	94	57.210	Cynoglossus_semilaevis
ENSSHAG00000009307	VARS2	63	53.994	ENSCVAG00000017765	vars2	93	53.994	Cyprinodon_variegatus
ENSSHAG00000009307	VARS2	95	53.320	ENSDARG00000056717	vars2	96	53.320	Danio_rerio
ENSSHAG00000009307	VARS2	79	76.287	ENSDORG00000008516	Vars2	93	76.259	Dipodomys_ordii
ENSSHAG00000009307	VARS2	99	66.131	ENSETEG00000014844	VARS2	99	66.131	Echinops_telfairi
ENSSHAG00000009307	VARS2	100	75.568	ENSEASG00005019997	VARS2	97	75.568	Equus_asinus_asinus
ENSSHAG00000009307	VARS2	100	76.276	ENSECAG00000018202	VARS2	99	76.276	Equus_caballus
ENSSHAG00000009307	VARS2	63	80.583	ENSEEUG00000012591	-	63	80.392	Erinaceus_europaeus
ENSSHAG00000009307	VARS2	92	52.699	ENSELUG00000017824	vars2	97	51.407	Esox_lucius
ENSSHAG00000009307	VARS2	100	76.181	ENSFCAG00000010531	VARS2	99	76.181	Felis_catus
ENSSHAG00000009307	VARS2	99	74.197	ENSFDAG00000017216	VARS2	99	74.197	Fukomys_damarensis
ENSSHAG00000009307	VARS2	89	51.709	ENSFHEG00000013932	vars2	91	51.816	Fundulus_heteroclitus
ENSSHAG00000009307	VARS2	89	54.366	ENSGMOG00000018960	vars2	99	54.366	Gadus_morhua
ENSSHAG00000009307	VARS2	82	54.366	ENSGAFG00000004737	vars2	86	54.366	Gambusia_affinis
ENSSHAG00000009307	VARS2	86	55.844	ENSGACG00000001464	vars2	99	53.854	Gasterosteus_aculeatus
ENSSHAG00000009307	VARS2	91	62.703	ENSGAGG00000011652	VARS2	99	62.703	Gopherus_agassizii
ENSSHAG00000009307	VARS2	100	75.781	ENSGGOG00000014587	VARS2	99	75.781	Gorilla_gorilla
ENSSHAG00000009307	VARS2	90	51.773	ENSHBUG00000002448	vars2	95	51.672	Haplochromis_burtoni
ENSSHAG00000009307	VARS2	100	73.277	ENSHGLG00000012886	VARS2	96	73.277	Heterocephalus_glaber_female
ENSSHAG00000009307	VARS2	100	73.182	ENSHGLG00100016535	VARS2	99	73.182	Heterocephalus_glaber_male
ENSSHAG00000009307	VARS2	65	53.058	ENSHCOG00000017907	vars2	93	53.058	Hippocampus_comes
ENSSHAG00000009307	VARS2	92	53.831	ENSIPUG00000015573	Vars2	95	52.827	Ictalurus_punctatus
ENSSHAG00000009307	VARS2	100	74.669	ENSSTOG00000009924	VARS2	99	74.669	Ictidomys_tridecemlineatus
ENSSHAG00000009307	VARS2	99	72.848	ENSJJAG00000011144	Vars2	99	72.848	Jaculus_jaculus
ENSSHAG00000009307	VARS2	94	51.591	ENSKMAG00000001393	vars2	98	50.840	Kryptolebias_marmoratus
ENSSHAG00000009307	VARS2	96	51.005	ENSLBEG00000011949	vars2	97	50.424	Labrus_bergylta
ENSSHAG00000009307	VARS2	52	63.604	ENSLBEG00000005480	-	82	63.129	Labrus_bergylta
ENSSHAG00000009307	VARS2	96	51.498	ENSLACG00000001576	-	99	51.498	Latimeria_chalumnae
ENSSHAG00000009307	VARS2	99	75.047	ENSLAFG00000015183	VARS2	99	75.047	Loxodonta_africana
ENSSHAG00000009307	VARS2	100	75.686	ENSMFAG00000042367	VARS2	99	75.686	Macaca_fascicularis
ENSSHAG00000009307	VARS2	100	75.686	ENSMMUG00000018609	VARS2	99	75.686	Macaca_mulatta
ENSSHAG00000009307	VARS2	100	75.686	ENSMNEG00000043163	VARS2	99	75.686	Macaca_nemestrina
ENSSHAG00000009307	VARS2	100	75.781	ENSMLEG00000041728	VARS2	97	75.781	Mandrillus_leucophaeus
ENSSHAG00000009307	VARS2	95	50.818	ENSMAMG00000020339	vars2	99	49.535	Mastacembelus_armatus
ENSSHAG00000009307	VARS2	98	50.279	ENSMZEG00005017669	vars2	99	50.279	Maylandia_zebra
ENSSHAG00000009307	VARS2	100	73.466	ENSMAUG00000018946	Vars2	99	73.466	Mesocricetus_auratus
ENSSHAG00000009307	VARS2	84	77.018	ENSMICG00000005365	VARS2	100	77.018	Microcebus_murinus
ENSSHAG00000009307	VARS2	95	77.098	ENSMOCG00000014607	Vars2	99	77.098	Microtus_ochrogaster
ENSSHAG00000009307	VARS2	92	51.710	ENSMMOG00000012122	vars2	98	50.575	Mola_mola
ENSSHAG00000009307	VARS2	99	85.297	ENSMODG00000015848	VARS2	99	85.297	Monodelphis_domestica
ENSSHAG00000009307	VARS2	93	51.988	ENSMALG00000009217	vars2	99	51.988	Monopterus_albus
ENSSHAG00000009307	VARS2	100	74.669	MGP_CAROLIEiJ_G0021529	Vars2	99	74.669	Mus_caroli
ENSSHAG00000009307	VARS2	100	74.764	ENSMUSG00000038838	Vars2	99	74.764	Mus_musculus
ENSSHAG00000009307	VARS2	100	75.425	MGP_PahariEiJ_G0020523	Vars2	99	75.425	Mus_pahari
ENSSHAG00000009307	VARS2	100	74.764	MGP_SPRETEiJ_G0022436	Vars2	99	74.764	Mus_spretus
ENSSHAG00000009307	VARS2	99	75.591	ENSMPUG00000011643	VARS2	99	75.591	Mustela_putorius_furo
ENSSHAG00000009307	VARS2	100	73.221	ENSMLUG00000002356	VARS2	97	73.221	Myotis_lucifugus
ENSSHAG00000009307	VARS2	97	68.665	ENSNGAG00000020607	Vars2	99	67.583	Nannospalax_galili
ENSSHAG00000009307	VARS2	69	47.658	ENSNBRG00000001624	vars2	61	49.311	Neolamprologus_brichardi
ENSSHAG00000009307	VARS2	100	73.037	ENSNLEG00000005625	VARS2	97	73.037	Nomascus_leucogenys
ENSSHAG00000009307	VARS2	79	84.914	ENSMEUG00000014475	VARS2	90	84.914	Notamacropus_eugenii
ENSSHAG00000009307	VARS2	90	69.945	ENSOPRG00000000682	VARS2	88	70.370	Ochotona_princeps
ENSSHAG00000009307	VARS2	99	72.117	ENSODEG00000017965	VARS2	99	72.117	Octodon_degus
ENSSHAG00000009307	VARS2	66	57.213	ENSONIG00000004734	vars2	99	37.073	Oreochromis_niloticus
ENSSHAG00000009307	VARS2	82	59.422	ENSOANG00000000398	-	96	92.000	Ornithorhynchus_anatinus
ENSSHAG00000009307	VARS2	100	68.837	ENSOCUG00000021496	VARS2	64	68.930	Oryctolagus_cuniculus
ENSSHAG00000009307	VARS2	92	51.972	ENSORLG00000010632	vars2	97	50.658	Oryzias_latipes
ENSSHAG00000009307	VARS2	92	52.170	ENSORLG00020018584	vars2	95	51.294	Oryzias_latipes_hni
ENSSHAG00000009307	VARS2	92	52.071	ENSORLG00015010408	vars2	95	51.052	Oryzias_latipes_hsok
ENSSHAG00000009307	VARS2	92	52.621	ENSOMEG00000008360	vars2	97	50.942	Oryzias_melastigma
ENSSHAG00000009307	VARS2	100	75.189	ENSOGAG00000006087	VARS2	97	74.906	Otolemur_garnettii
ENSSHAG00000009307	VARS2	99	74.716	ENSOARG00000010844	VARS2	98	74.599	Ovis_aries
ENSSHAG00000009307	VARS2	100	75.591	ENSPPAG00000041141	VARS2	99	75.591	Pan_paniscus
ENSSHAG00000009307	VARS2	100	76.326	ENSPPRG00000006751	VARS2	97	76.326	Panthera_pardus
ENSSHAG00000009307	VARS2	100	76.326	ENSPTIG00000017799	VARS2	97	78.702	Panthera_tigris_altaica
ENSSHAG00000009307	VARS2	100	75.591	ENSPTRG00000034497	VARS2	99	75.591	Pan_troglodytes
ENSSHAG00000009307	VARS2	100	76.064	ENSPANG00000018481	VARS2	100	76.550	Papio_anubis
ENSSHAG00000009307	VARS2	98	52.547	ENSPKIG00000011372	vars2	98	52.358	Paramormyrops_kingsleyae
ENSSHAG00000009307	VARS2	59	67.722	ENSPSIG00000006206	VARS2	92	66.872	Pelodiscus_sinensis
ENSSHAG00000009307	VARS2	96	53.385	ENSPMGG00000000465	vars2	96	53.385	Periophthalmus_magnuspinnatus
ENSSHAG00000009307	VARS2	99	73.435	ENSPEMG00000014691	Vars2	99	73.435	Peromyscus_maniculatus_bairdii
ENSSHAG00000009307	VARS2	100	89.489	ENSPCIG00000015040	VARS2	99	89.489	Phascolarctos_cinereus
ENSSHAG00000009307	VARS2	92	53.227	ENSPFOG00000017616	vars2	97	51.992	Poecilia_formosa
ENSSHAG00000009307	VARS2	99	50.555	ENSPLAG00000019778	vars2	99	50.832	Poecilia_latipinna
ENSSHAG00000009307	VARS2	92	52.772	ENSPMEG00000011123	vars2	98	50.880	Poecilia_mexicana
ENSSHAG00000009307	VARS2	87	48.674	ENSPREG00000014998	vars2	93	47.422	Poecilia_reticulata
ENSSHAG00000009307	VARS2	100	75.497	ENSPPYG00000016424	VARS2	99	75.497	Pongo_abelii
ENSSHAG00000009307	VARS2	84	73.957	ENSPCAG00000006946	VARS2	83	73.913	Procavia_capensis
ENSSHAG00000009307	VARS2	100	74.882	ENSPCOG00000014839	VARS2	97	74.882	Propithecus_coquereli
ENSSHAG00000009307	VARS2	100	74.953	ENSPVAG00000004197	VARS2	99	74.953	Pteropus_vampyrus
ENSSHAG00000009307	VARS2	85	58.537	ENSPNYG00000010314	vars2	99	58.266	Pundamilia_nyererei
ENSSHAG00000009307	VARS2	95	53.720	ENSPNAG00000026793	vars2	96	53.276	Pygocentrus_nattereri
ENSSHAG00000009307	VARS2	99	74.078	ENSRNOG00000000833	Vars2	99	74.078	Rattus_norvegicus
ENSSHAG00000009307	VARS2	100	75.307	ENSRBIG00000032725	VARS2	99	75.307	Rhinopithecus_bieti
ENSSHAG00000009307	VARS2	100	75.497	ENSRROG00000043847	VARS2	99	75.497	Rhinopithecus_roxellana
ENSSHAG00000009307	VARS2	100	73.494	ENSSBOG00000033240	VARS2	97	73.494	Saimiri_boliviensis_boliviensis
ENSSHAG00000009307	VARS2	97	52.707	ENSSFOG00015016187	vars2	96	52.707	Scleropages_formosus
ENSSHAG00000009307	VARS2	93	53.440	ENSSMAG00000020842	vars2	98	52.376	Scophthalmus_maximus
ENSSHAG00000009307	VARS2	93	52.372	ENSSDUG00000011598	vars2	97	51.464	Seriola_dumerili
ENSSHAG00000009307	VARS2	91	53.063	ENSSLDG00000015492	vars2	97	50.902	Seriola_lalandi_dorsalis
ENSSHAG00000009307	VARS2	57	88.321	ENSSARG00000003786	-	69	88.321	Sorex_araneus
ENSSHAG00000009307	VARS2	88	59.422	ENSSPUG00000014700	VARS2	94	59.422	Sphenodon_punctatus
ENSSHAG00000009307	VARS2	92	50.150	ENSSPAG00000004654	vars2	96	49.612	Stegastes_partitus
ENSSHAG00000009307	VARS2	100	75.992	ENSSSCG00000001384	VARS2	99	77.374	Sus_scrofa
ENSSHAG00000009307	VARS2	89	54.900	ENSTRUG00000005264	vars2	93	53.862	Takifugu_rubripes
ENSSHAG00000009307	VARS2	97	51.644	ENSTNIG00000005916	vars2	96	51.794	Tetraodon_nigroviridis
ENSSHAG00000009307	VARS2	52	81.818	ENSTBEG00000007976	-	52	81.818	Tupaia_belangeri
ENSSHAG00000009307	VARS2	89	76.733	ENSTTRG00000012243	VARS2	87	76.733	Tursiops_truncatus
ENSSHAG00000009307	VARS2	100	75.449	ENSUAMG00000026124	VARS2	99	78.214	Ursus_americanus
ENSSHAG00000009307	VARS2	100	76.087	ENSUMAG00000019894	VARS2	99	76.087	Ursus_maritimus
ENSSHAG00000009307	VARS2	100	75.047	ENSVVUG00000010754	VARS2	94	75.047	Vulpes_vulpes
ENSSHAG00000009307	VARS2	89	56.008	ENSXETG00000003036	vars2	99	56.008	Xenopus_tropicalis
ENSSHAG00000009307	VARS2	89	54.211	ENSXCOG00000003455	vars2	97	52.306	Xiphophorus_couchianus
ENSSHAG00000009307	VARS2	92	52.174	ENSXMAG00000013523	vars2	98	50.416	Xiphophorus_maculatus