EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000009321 (Gene tree)
Gene ID: -
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 42232 bases
Position: chrGL849567.1:530319-572550
Accession: 28666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000010813	CMS1	PF14617.6	2.5e-33	1	1
ENSSHAP00000010813	DEAD	PF00270.29	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000010907	CMSS1-201	1715	-	ENSSHAP00000010813	253 (aa)	-	G3W5V8

Gene Model

Click here to download ENSSHAG00000009321's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000009321's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000009321	CMSS1	99	74.206	ENSG00000184220	CMSS1	99	77.778	Homo_sapiens
ENSSHAG00000009321	CMSS1	80	64.851	ENSAPOG00000010604	cmss1	82	64.851	Acanthochromis_polyacanthus
ENSSHAG00000009321	CMSS1	99	73.810	ENSAMEG00000004092	CMSS1	96	73.810	Ailuropoda_melanoleuca
ENSSHAG00000009321	CMSS1	80	54.950	ENSACIG00000021854	cmss1	75	54.950	Amphilophus_citrinellus
ENSSHAG00000009321	CMSS1	80	63.861	ENSAOCG00000013361	cmss1	70	63.861	Amphiprion_ocellaris
ENSSHAG00000009321	CMSS1	80	63.861	ENSAPEG00000005829	cmss1	70	63.861	Amphiprion_percula
ENSSHAG00000009321	CMSS1	81	63.592	ENSATEG00000008209	cmss1	74	63.861	Anabas_testudineus
ENSSHAG00000009321	CMSS1	91	72.174	ENSAPLG00000010542	CMSS1	100	71.739	Anas_platyrhynchos
ENSSHAG00000009321	CMSS1	91	72.532	ENSACAG00000011065	CMSS1	74	76.238	Anolis_carolinensis
ENSSHAG00000009321	CMSS1	99	74.104	ENSANAG00000023565	CMSS1	94	74.104	Aotus_nancymaae
ENSSHAG00000009321	CMSS1	80	61.881	ENSACLG00000027294	cmss1	69	61.881	Astatotilapia_calliptera
ENSSHAG00000009321	CMSS1	79	55.000	ENSAMXG00000002046	cmss1	69	54.950	Astyanax_mexicanus
ENSSHAG00000009321	CMSS1	99	72.619	ENSBTAG00000013663	CMSS1	90	72.619	Bos_taurus
ENSSHAG00000009321	CMSS1	99	73.810	ENSCJAG00000000610	CMSS1	95	73.810	Callithrix_jacchus
ENSSHAG00000009321	CMSS1	99	75.000	ENSCAFG00000009230	CMSS1	90	75.000	Canis_familiaris
ENSSHAG00000009321	CMSS1	99	75.000	ENSCAFG00020009464	-	91	75.000	Canis_lupus_dingo
ENSSHAG00000009321	CMSS1	89	72.566	ENSCAFG00020024156	-	63	75.743	Canis_lupus_dingo
ENSSHAG00000009321	CMSS1	99	72.619	ENSCHIG00000013003	CMSS1	90	72.619	Capra_hircus
ENSSHAG00000009321	CMSS1	99	72.222	ENSTSYG00000009266	CMSS1	95	72.222	Carlito_syrichta
ENSSHAG00000009321	CMSS1	88	60.987	ENSCAPG00000013584	CMSS1	88	65.608	Cavia_aperea
ENSSHAG00000009321	CMSS1	98	73.092	ENSCPOG00000014680	CMSS1	89	72.222	Cavia_porcellus
ENSSHAG00000009321	CMSS1	99	75.000	ENSCCAG00000034685	CMSS1	95	75.000	Cebus_capucinus
ENSSHAG00000009321	CMSS1	99	74.603	ENSCATG00000031980	CMSS1	95	74.603	Cercocebus_atys
ENSSHAG00000009321	CMSS1	91	77.922	ENSCLAG00000011241	CMSS1	99	77.922	Chinchilla_lanigera
ENSSHAG00000009321	CMSS1	98	75.100	ENSCSAG00000006024	CMSS1	100	75.100	Chlorocebus_sabaeus
ENSSHAG00000009321	CMSS1	99	57.143	ENSCHOG00000012098	CMSS1	90	57.143	Choloepus_hoffmanni
ENSSHAG00000009321	CMSS1	75	42.487	ENSCING00000014848	-	93	44.253	Ciona_intestinalis
ENSSHAG00000009321	CMSS1	99	74.603	ENSCANG00000031337	CMSS1	95	74.603	Colobus_angolensis_palliatus
ENSSHAG00000009321	CMSS1	99	71.032	ENSCGRG00001014305	Cmss1	89	71.032	Cricetulus_griseus_chok1gshd
ENSSHAG00000009321	CMSS1	99	71.429	ENSCGRG00000006722	Cmss1	96	71.429	Cricetulus_griseus_crigri
ENSSHAG00000009321	CMSS1	80	64.851	ENSCSEG00000004958	cmss1	69	64.851	Cynoglossus_semilaevis
ENSSHAG00000009321	CMSS1	80	64.356	ENSCVAG00000005039	cmss1	70	64.356	Cyprinodon_variegatus
ENSSHAG00000009321	CMSS1	89	52.814	ENSDARG00000112579	cmss1	69	55.446	Danio_rerio
ENSSHAG00000009321	CMSS1	99	74.900	ENSDNOG00000040418	CMSS1	88	74.900	Dasypus_novemcinctus
ENSSHAG00000009321	CMSS1	99	75.000	ENSDORG00000010461	Cmss1	89	75.000	Dipodomys_ordii
ENSSHAG00000009321	CMSS1	52	53.030	ENSEBUG00000002156	-	96	53.030	Eptatretus_burgeri
ENSSHAG00000009321	CMSS1	94	75.314	ENSEASG00005010966	CMSS1	92	79.703	Equus_asinus_asinus
ENSSHAG00000009321	CMSS1	99	72.222	ENSECAG00000015662	CMSS1	99	76.991	Equus_caballus
ENSSHAG00000009321	CMSS1	90	53.070	ENSEEUG00000007624	-	82	53.070	Erinaceus_europaeus
ENSSHAG00000009321	CMSS1	94	56.432	ENSELUG00000019459	cmss1	80	56.432	Esox_lucius
ENSSHAG00000009321	CMSS1	99	76.587	ENSFCAG00000044577	CMSS1	89	76.587	Felis_catus
ENSSHAG00000009321	CMSS1	91	70.130	ENSFALG00000005816	CMSS1	97	70.130	Ficedula_albicollis
ENSSHAG00000009321	CMSS1	90	77.632	ENSFDAG00000012577	CMSS1	100	77.632	Fukomys_damarensis
ENSSHAG00000009321	CMSS1	90	59.740	ENSFHEG00000012008	cmss1	83	63.366	Fundulus_heteroclitus
ENSSHAG00000009321	CMSS1	80	62.376	ENSGMOG00000016729	cmss1	72	62.376	Gadus_morhua
ENSSHAG00000009321	CMSS1	91	73.362	ENSGALG00000015267	CMSS1	88	73.362	Gallus_gallus
ENSSHAG00000009321	CMSS1	82	63.285	ENSGAFG00000021217	cmss1	77	63.366	Gambusia_affinis
ENSSHAG00000009321	CMSS1	80	58.911	ENSGACG00000002798	cmss1	72	58.911	Gasterosteus_aculeatus
ENSSHAG00000009321	CMSS1	99	68.992	ENSGAGG00000019861	CMSS1	100	68.872	Gopherus_agassizii
ENSSHAG00000009321	CMSS1	99	74.603	ENSGGOG00000014125	CMSS1	95	74.603	Gorilla_gorilla
ENSSHAG00000009321	CMSS1	80	61.881	ENSHBUG00000008431	cmss1	71	61.881	Haplochromis_burtoni
ENSSHAG00000009321	CMSS1	99	71.825	ENSHGLG00000019481	CMSS1	98	71.825	Heterocephalus_glaber_female
ENSSHAG00000009321	CMSS1	99	72.222	ENSHGLG00100010314	CMSS1	96	72.222	Heterocephalus_glaber_male
ENSSHAG00000009321	CMSS1	80	65.347	ENSHCOG00000003222	cmss1	68	65.347	Hippocampus_comes
ENSSHAG00000009321	CMSS1	87	57.078	ENSIPUG00000011591	cmss1	70	57.921	Ictalurus_punctatus
ENSSHAG00000009321	CMSS1	99	74.603	ENSSTOG00000019366	CMSS1	89	74.603	Ictidomys_tridecemlineatus
ENSSHAG00000009321	CMSS1	99	73.016	ENSJJAG00000014894	Cmss1	90	79.208	Jaculus_jaculus
ENSSHAG00000009321	CMSS1	80	55.941	ENSKMAG00000002390	cmss1	81	55.941	Kryptolebias_marmoratus
ENSSHAG00000009321	CMSS1	91	52.917	ENSLBEG00000006298	cmss1	83	58.128	Labrus_bergylta
ENSSHAG00000009321	CMSS1	90	69.130	ENSLACG00000009293	CMSS1	100	68.261	Latimeria_chalumnae
ENSSHAG00000009321	CMSS1	89	59.471	ENSLOCG00000009391	cmss1	71	61.386	Lepisosteus_oculatus
ENSSHAG00000009321	CMSS1	90	77.632	ENSLAFG00000017509	CMSS1	100	77.632	Loxodonta_africana
ENSSHAG00000009321	CMSS1	99	75.000	ENSMFAG00000045006	CMSS1	95	75.000	Macaca_fascicularis
ENSSHAG00000009321	CMSS1	99	74.603	ENSMMUG00000002939	CMSS1	97	78.539	Macaca_mulatta
ENSSHAG00000009321	CMSS1	99	75.000	ENSMNEG00000031315	CMSS1	95	75.000	Macaca_nemestrina
ENSSHAG00000009321	CMSS1	99	74.206	ENSMLEG00000033660	CMSS1	95	74.206	Mandrillus_leucophaeus
ENSSHAG00000009321	CMSS1	80	63.861	ENSMAMG00000017176	cmss1	70	63.861	Mastacembelus_armatus
ENSSHAG00000009321	CMSS1	80	61.881	ENSMZEG00005021886	cmss1	69	61.881	Maylandia_zebra
ENSSHAG00000009321	CMSS1	90	73.246	ENSMGAG00000014360	CMSS1	100	73.246	Meleagris_gallopavo
ENSSHAG00000009321	CMSS1	99	51.587	ENSMAUG00000020609	Cmss1	87	50.781	Mesocricetus_auratus
ENSSHAG00000009321	CMSS1	99	74.206	ENSMICG00000048977	CMSS1	95	74.206	Microcebus_murinus
ENSSHAG00000009321	CMSS1	99	70.238	ENSMOCG00000021937	Cmss1	89	70.238	Microtus_ochrogaster
ENSSHAG00000009321	CMSS1	80	62.376	ENSMMOG00000019794	cmss1	84	62.376	Mola_mola
ENSSHAG00000009321	CMSS1	99	86.454	ENSMODG00000002275	CMSS1	92	86.454	Monodelphis_domestica
ENSSHAG00000009321	CMSS1	80	65.347	ENSMALG00000004250	cmss1	69	65.347	Monopterus_albus
ENSSHAG00000009321	CMSS1	99	71.146	MGP_CAROLIEiJ_G0020824	Cmss1	89	69.960	Mus_caroli
ENSSHAG00000009321	CMSS1	99	71.937	ENSMUSG00000022748	Cmss1	89	70.751	Mus_musculus
ENSSHAG00000009321	CMSS1	99	71.542	MGP_PahariEiJ_G0016524	Cmss1	89	70.356	Mus_pahari
ENSSHAG00000009321	CMSS1	99	71.937	MGP_SPRETEiJ_G0021724	Cmss1	89	71.937	Mus_spretus
ENSSHAG00000009321	CMSS1	98	75.806	ENSMPUG00000011324	CMSS1	94	75.806	Mustela_putorius_furo
ENSSHAG00000009321	CMSS1	99	74.803	ENSMLUG00000001131	CMSS1	95	74.803	Myotis_lucifugus
ENSSHAG00000009321	CMSS1	99	73.016	ENSNGAG00000020316	Cmss1	89	73.016	Nannospalax_galili
ENSSHAG00000009321	CMSS1	80	61.881	ENSNBRG00000003095	cmss1	69	61.881	Neolamprologus_brichardi
ENSSHAG00000009321	CMSS1	99	75.000	ENSNLEG00000034172	CMSS1	95	75.000	Nomascus_leucogenys
ENSSHAG00000009321	CMSS1	90	80.702	ENSMEUG00000014505	CMSS1	100	80.702	Notamacropus_eugenii
ENSSHAG00000009321	CMSS1	99	74.206	ENSOPRG00000002986	CMSS1	89	74.206	Ochotona_princeps
ENSSHAG00000009321	CMSS1	92	72.961	ENSODEG00000003558	-	86	72.961	Octodon_degus
ENSSHAG00000009321	CMSS1	99	60.956	ENSODEG00000009446	-	97	60.956	Octodon_degus
ENSSHAG00000009321	CMSS1	99	71.429	ENSODEG00000005226	-	89	71.429	Octodon_degus
ENSSHAG00000009321	CMSS1	99	61.111	ENSODEG00000001853	-	89	61.111	Octodon_degus
ENSSHAG00000009321	CMSS1	80	62.376	ENSONIG00000006678	cmss1	77	62.376	Oreochromis_niloticus
ENSSHAG00000009321	CMSS1	99	77.381	ENSOANG00000007529	CMSS1	100	78.541	Ornithorhynchus_anatinus
ENSSHAG00000009321	CMSS1	99	75.000	ENSOCUG00000025366	CMSS1	90	75.000	Oryctolagus_cuniculus
ENSSHAG00000009321	CMSS1	80	64.851	ENSORLG00000020340	cmss1	71	64.851	Oryzias_latipes
ENSSHAG00000009321	CMSS1	91	54.585	ENSORLG00020012235	cmss1	85	57.921	Oryzias_latipes_hni
ENSSHAG00000009321	CMSS1	80	57.921	ENSORLG00015015551	cmss1	75	57.921	Oryzias_latipes_hsok
ENSSHAG00000009321	CMSS1	80	65.842	ENSOMEG00000012555	cmss1	70	65.842	Oryzias_melastigma
ENSSHAG00000009321	CMSS1	90	78.070	ENSOGAG00000002045	CMSS1	100	78.070	Otolemur_garnettii
ENSSHAG00000009321	CMSS1	99	72.727	ENSOARG00000017899	CMSS1	86	72.727	Ovis_aries
ENSSHAG00000009321	CMSS1	99	75.000	ENSPPAG00000038515	CMSS1	91	75.000	Pan_paniscus
ENSSHAG00000009321	CMSS1	99	76.587	ENSPPRG00000016767	CMSS1	89	76.587	Panthera_pardus
ENSSHAG00000009321	CMSS1	99	76.190	ENSPTIG00000018274	CMSS1	89	76.190	Panthera_tigris_altaica
ENSSHAG00000009321	CMSS1	99	74.206	ENSPTRG00000015157	CMSS1	100	74.699	Pan_troglodytes
ENSSHAG00000009321	CMSS1	99	73.016	ENSPANG00000019980	CMSS1	95	73.016	Papio_anubis
ENSSHAG00000009321	CMSS1	89	64.348	ENSPKIG00000012609	cmss1	75	68.317	Paramormyrops_kingsleyae
ENSSHAG00000009321	CMSS1	91	77.293	ENSPSIG00000003849	CMSS1	100	77.293	Pelodiscus_sinensis
ENSSHAG00000009321	CMSS1	80	63.547	ENSPMGG00000010286	cmss1	87	63.547	Periophthalmus_magnuspinnatus
ENSSHAG00000009321	CMSS1	99	71.315	ENSPEMG00000016384	Cmss1	88	71.315	Peromyscus_maniculatus_bairdii
ENSSHAG00000009321	CMSS1	81	55.882	ENSPMAG00000001146	cmss1	99	56.436	Petromyzon_marinus
ENSSHAG00000009321	CMSS1	100	90.119	ENSPCIG00000015656	CMSS1	94	90.119	Phascolarctos_cinereus
ENSSHAG00000009321	CMSS1	80	63.366	ENSPFOG00000016849	cmss1	71	63.366	Poecilia_formosa
ENSSHAG00000009321	CMSS1	80	62.871	ENSPLAG00000008323	cmss1	71	62.871	Poecilia_latipinna
ENSSHAG00000009321	CMSS1	80	63.366	ENSPMEG00000021020	cmss1	70	63.366	Poecilia_mexicana
ENSSHAG00000009321	CMSS1	80	62.871	ENSPREG00000007618	cmss1	69	62.871	Poecilia_reticulata
ENSSHAG00000009321	CMSS1	99	75.397	ENSPPYG00000013606	CMSS1	91	75.397	Pongo_abelii
ENSSHAG00000009321	CMSS1	99	74.206	ENSPCOG00000020035	CMSS1	95	74.206	Propithecus_coquereli
ENSSHAG00000009321	CMSS1	99	64.286	ENSPVAG00000017031	CMSS1	89	64.286	Pteropus_vampyrus
ENSSHAG00000009321	CMSS1	70	65.341	ENSPNYG00000013428	cmss1	65	65.341	Pundamilia_nyererei
ENSSHAG00000009321	CMSS1	90	54.545	ENSPNAG00000007912	cmss1	69	58.416	Pygocentrus_nattereri
ENSSHAG00000009321	CMSS1	99	71.146	ENSRNOG00000027888	Cmss1	96	70.356	Rattus_norvegicus
ENSSHAG00000009321	CMSS1	99	74.206	ENSRBIG00000037931	CMSS1	95	74.206	Rhinopithecus_bieti
ENSSHAG00000009321	CMSS1	99	74.206	ENSRROG00000042910	CMSS1	95	74.206	Rhinopithecus_roxellana
ENSSHAG00000009321	CMSS1	99	73.810	ENSSBOG00000030980	CMSS1	95	73.810	Saimiri_boliviensis_boliviensis
ENSSHAG00000009321	CMSS1	89	60.435	ENSSFOG00015001509	cmss1	81	59.574	Scleropages_formosus
ENSSHAG00000009321	CMSS1	80	64.356	ENSSMAG00000001653	cmss1	69	64.356	Scophthalmus_maximus
ENSSHAG00000009321	CMSS1	80	65.347	ENSSDUG00000007719	cmss1	70	65.347	Seriola_dumerili
ENSSHAG00000009321	CMSS1	82	65.217	ENSSLDG00000012300	cmss1	68	65.842	Seriola_lalandi_dorsalis
ENSSHAG00000009321	CMSS1	99	64.940	ENSSARG00000003584	CMSS1	88	64.940	Sorex_araneus
ENSSHAG00000009321	CMSS1	89	74.779	ENSSPUG00000003865	CMSS1	100	74.779	Sphenodon_punctatus
ENSSHAG00000009321	CMSS1	82	64.734	ENSSPAG00000019182	cmss1	63	65.347	Stegastes_partitus
ENSSHAG00000009321	CMSS1	99	73.810	ENSSSCG00000011970	CMSS1	89	73.810	Sus_scrofa
ENSSHAG00000009321	CMSS1	91	69.432	ENSTGUG00000013635	CMSS1	100	69.432	Taeniopygia_guttata
ENSSHAG00000009321	CMSS1	80	63.366	ENSTRUG00000015265	cmss1	72	63.366	Takifugu_rubripes
ENSSHAG00000009321	CMSS1	80	59.406	ENSTNIG00000002880	cmss1	73	59.406	Tetraodon_nigroviridis
ENSSHAG00000009321	CMSS1	90	57.018	ENSTBEG00000016722	CMSS1	81	57.018	Tupaia_belangeri
ENSSHAG00000009321	CMSS1	99	72.000	ENSTTRG00000001562	CMSS1	88	72.000	Tursiops_truncatus
ENSSHAG00000009321	CMSS1	99	75.299	ENSUAMG00000024209	CMSS1	95	79.039	Ursus_americanus
ENSSHAG00000009321	CMSS1	99	74.900	ENSUMAG00000001983	CMSS1	95	74.900	Ursus_maritimus
ENSSHAG00000009321	CMSS1	90	63.158	ENSVPAG00000000263	CMSS1	57	81.875	Vicugna_pacos
ENSSHAG00000009321	CMSS1	99	75.200	ENSVVUG00000021647	-	100	75.200	Vulpes_vulpes
ENSSHAG00000009321	CMSS1	96	73.469	ENSVVUG00000007776	-	80	81.188	Vulpes_vulpes
ENSSHAG00000009321	CMSS1	87	65.158	ENSXETG00000011858	cmss1	72	67.327	Xenopus_tropicalis
ENSSHAG00000009321	CMSS1	82	63.462	ENSXCOG00000018724	cmss1	69	63.861	Xiphophorus_couchianus
ENSSHAG00000009321	CMSS1	82	63.462	ENSXMAG00000011243	cmss1	76	63.861	Xiphophorus_maculatus