EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000009462 (Gene tree)
Gene ID: 100926168
Gene Symbol: PRPF19
Alias: NMP200|PRP19|PSO4|SNEV|UBOX4|hPSO4
Full Name: pre-mRNA processing factor 19
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 6698 bases
Position: chrGL864905.1:547002-553699
Accession: 100926168
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000010978	Prp19	PF08606.11	4.4e-33	1	1
ENSSHAP00000010977	Prp19	PF08606.11	3.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000011072	PRPF19-202	2094	-	ENSSHAP00000010978	504 (aa)	XP_003774058	G3W6C3
ENSSHAT00000011071	PRPF19-201	2160	-	ENSSHAP00000010977	526 (aa)	-	G3W6C2

Gene Model

Click here to download ENSSHAG00000009462's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03040	Spliceosome	KEGG
shr04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000009462's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000009462	PRPF19	50	32.061	ENSSHAG00000015266	TBL3	62	32.061

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000009462	PRPF19	100	99.603	ENSG00000110107	PRPF19	100	100.000	Homo_sapiens
ENSSHAG00000009462	PRPF19	100	85.941	ENSAPOG00000017823	prpf19	100	85.941	Acanthochromis_polyacanthus
ENSSHAG00000009462	PRPF19	100	98.994	ENSAMEG00000007375	PRPF19	99	98.994	Ailuropoda_melanoleuca
ENSSHAG00000009462	PRPF19	99	84.692	ENSACIG00000015876	prpf19	99	84.692	Amphilophus_citrinellus
ENSSHAG00000009462	PRPF19	100	85.941	ENSAOCG00000020444	prpf19	100	85.941	Amphiprion_ocellaris
ENSSHAG00000009462	PRPF19	100	85.941	ENSAPEG00000016076	prpf19	100	85.941	Amphiprion_percula
ENSSHAG00000009462	PRPF19	100	85.941	ENSATEG00000008840	prpf19	100	85.941	Anabas_testudineus
ENSSHAG00000009462	PRPF19	100	97.421	ENSACAG00000017797	PRPF19	100	97.421	Anolis_carolinensis
ENSSHAG00000009462	PRPF19	100	99.206	ENSANAG00000021762	PRPF19	100	99.206	Aotus_nancymaae
ENSSHAG00000009462	PRPF19	100	84.950	ENSACLG00000009416	prpf19	100	84.950	Astatotilapia_calliptera
ENSSHAG00000009462	PRPF19	100	85.743	ENSAMXG00000011547	prpf19	100	85.743	Astyanax_mexicanus
ENSSHAG00000009462	PRPF19	100	99.405	ENSBTAG00000014366	PRPF19	100	99.405	Bos_taurus
ENSSHAG00000009462	PRPF19	100	51.976	WBGene00020423	prp-19	100	51.976	Caenorhabditis_elegans
ENSSHAG00000009462	PRPF19	100	99.405	ENSCJAG00000016509	PRPF19	100	99.405	Callithrix_jacchus
ENSSHAG00000009462	PRPF19	100	99.008	ENSCAFG00000016438	PRPF19	98	99.008	Canis_familiaris
ENSSHAG00000009462	PRPF19	100	99.008	ENSCAFG00020012565	PRPF19	100	99.008	Canis_lupus_dingo
ENSSHAG00000009462	PRPF19	100	99.405	ENSCHIG00000018281	PRPF19	100	99.405	Capra_hircus
ENSSHAG00000009462	PRPF19	99	98.795	ENSTSYG00000006860	PRPF19	99	98.795	Carlito_syrichta
ENSSHAG00000009462	PRPF19	99	98.597	ENSCAPG00000016225	PRPF19	100	98.597	Cavia_aperea
ENSSHAG00000009462	PRPF19	100	99.008	ENSCPOG00000020688	PRPF19	100	99.008	Cavia_porcellus
ENSSHAG00000009462	PRPF19	100	99.405	ENSCCAG00000025839	PRPF19	100	99.405	Cebus_capucinus
ENSSHAG00000009462	PRPF19	100	99.603	ENSCATG00000041921	PRPF19	100	99.603	Cercocebus_atys
ENSSHAG00000009462	PRPF19	99	98.994	ENSCLAG00000003338	PRPF19	100	98.994	Chinchilla_lanigera
ENSSHAG00000009462	PRPF19	100	99.603	ENSCSAG00000006254	PRPF19	100	99.603	Chlorocebus_sabaeus
ENSSHAG00000009462	PRPF19	62	87.781	ENSCHOG00000005840	PRPF19	100	87.781	Choloepus_hoffmanni
ENSSHAG00000009462	PRPF19	100	97.619	ENSCPBG00000027061	PRPF19	100	97.619	Chrysemys_picta_bellii
ENSSHAG00000009462	PRPF19	87	68.578	ENSCING00000016625	-	99	68.578	Ciona_intestinalis
ENSSHAG00000009462	PRPF19	100	68.651	ENSCSAVG00000002027	-	99	68.651	Ciona_savignyi
ENSSHAG00000009462	PRPF19	99	100.000	ENSCANG00000027155	PRPF19	99	46.228	Colobus_angolensis_palliatus
ENSSHAG00000009462	PRPF19	100	99.008	ENSCGRG00001002699	Prpf19	100	99.008	Cricetulus_griseus_chok1gshd
ENSSHAG00000009462	PRPF19	100	98.016	ENSCGRG00000008964	Prpf19	100	98.016	Cricetulus_griseus_crigri
ENSSHAG00000009462	PRPF19	100	84.950	ENSCSEG00000010411	prpf19	100	84.950	Cynoglossus_semilaevis
ENSSHAG00000009462	PRPF19	100	84.752	ENSCVAG00000012011	prpf19	100	84.752	Cyprinodon_variegatus
ENSSHAG00000009462	PRPF19	100	85.347	ENSDARG00000015239	prpf19	100	85.347	Danio_rerio
ENSSHAG00000009462	PRPF19	100	99.405	ENSDNOG00000005797	PRPF19	100	99.405	Dasypus_novemcinctus
ENSSHAG00000009462	PRPF19	100	99.008	ENSDORG00000006906	Prpf19	100	99.008	Dipodomys_ordii
ENSSHAG00000009462	PRPF19	100	65.686	FBgn0261119	Prp19	99	65.686	Drosophila_melanogaster
ENSSHAG00000009462	PRPF19	100	86.508	ENSETEG00000012295	PRPF19	100	86.508	Echinops_telfairi
ENSSHAG00000009462	PRPF19	83	77.143	ENSEBUG00000013075	prpf19	100	77.143	Eptatretus_burgeri
ENSSHAG00000009462	PRPF19	100	98.739	ENSEASG00005008056	PRPF19	98	98.739	Equus_asinus_asinus
ENSSHAG00000009462	PRPF19	100	99.206	ENSECAG00000007322	PRPF19	100	99.206	Equus_caballus
ENSSHAG00000009462	PRPF19	100	78.571	ENSELUG00000004578	prpf19	100	78.571	Esox_lucius
ENSSHAG00000009462	PRPF19	100	84.554	ENSELUG00000020276	-	100	84.554	Esox_lucius
ENSSHAG00000009462	PRPF19	100	99.008	ENSFCAG00000013668	PRPF19	100	99.008	Felis_catus
ENSSHAG00000009462	PRPF19	100	97.222	ENSFALG00000012084	PRPF19	100	97.222	Ficedula_albicollis
ENSSHAG00000009462	PRPF19	84	98.578	ENSFDAG00000009420	PRPF19	100	96.364	Fukomys_damarensis
ENSSHAG00000009462	PRPF19	100	84.752	ENSFHEG00000022135	prpf19	100	84.752	Fundulus_heteroclitus
ENSSHAG00000009462	PRPF19	100	86.337	ENSGMOG00000014756	prpf19	100	86.337	Gadus_morhua
ENSSHAG00000009462	PRPF19	100	97.619	ENSGALG00000036530	PRPF19	100	97.619	Gallus_gallus
ENSSHAG00000009462	PRPF19	100	84.158	ENSGAFG00000008931	prpf19	100	84.158	Gambusia_affinis
ENSSHAG00000009462	PRPF19	100	84.950	ENSGACG00000017976	prpf19	100	84.950	Gasterosteus_aculeatus
ENSSHAG00000009462	PRPF19	100	97.817	ENSGAGG00000013328	PRPF19	100	97.817	Gopherus_agassizii
ENSSHAG00000009462	PRPF19	100	99.603	ENSGGOG00000008648	PRPF19	100	99.603	Gorilla_gorilla
ENSSHAG00000009462	PRPF19	100	84.950	ENSHBUG00000008394	prpf19	100	84.950	Haplochromis_burtoni
ENSSHAG00000009462	PRPF19	100	98.611	ENSHGLG00000003934	PRPF19	100	98.611	Heterocephalus_glaber_female
ENSSHAG00000009462	PRPF19	99	80.288	ENSHGLG00100010649	PRPF19	100	80.080	Heterocephalus_glaber_male
ENSSHAG00000009462	PRPF19	100	83.762	ENSHCOG00000016720	prpf19	100	83.762	Hippocampus_comes
ENSSHAG00000009462	PRPF19	100	85.743	ENSIPUG00000013084	prpf19	100	85.743	Ictalurus_punctatus
ENSSHAG00000009462	PRPF19	100	99.008	ENSSTOG00000001598	PRPF19	100	99.008	Ictidomys_tridecemlineatus
ENSSHAG00000009462	PRPF19	100	99.008	ENSJJAG00000020609	Prpf19	100	99.008	Jaculus_jaculus
ENSSHAG00000009462	PRPF19	100	85.149	ENSKMAG00000010257	prpf19	100	85.149	Kryptolebias_marmoratus
ENSSHAG00000009462	PRPF19	100	85.347	ENSLBEG00000027436	prpf19	100	85.347	Labrus_bergylta
ENSSHAG00000009462	PRPF19	100	90.079	ENSLACG00000003434	PRPF19	100	90.079	Latimeria_chalumnae
ENSSHAG00000009462	PRPF19	91	74.627	ENSLOCG00000008123	prpf19	100	74.627	Lepisosteus_oculatus
ENSSHAG00000009462	PRPF19	100	96.198	ENSLAFG00000002644	PRPF19	100	96.198	Loxodonta_africana
ENSSHAG00000009462	PRPF19	100	99.603	ENSMFAG00000036743	PRPF19	100	99.603	Macaca_fascicularis
ENSSHAG00000009462	PRPF19	100	99.603	ENSMMUG00000014530	PRPF19	100	99.603	Macaca_mulatta
ENSSHAG00000009462	PRPF19	100	99.603	ENSMNEG00000044485	PRPF19	100	99.603	Macaca_nemestrina
ENSSHAG00000009462	PRPF19	100	99.603	ENSMLEG00000043312	PRPF19	100	99.603	Mandrillus_leucophaeus
ENSSHAG00000009462	PRPF19	100	85.347	ENSMAMG00000006843	prpf19	100	85.347	Mastacembelus_armatus
ENSSHAG00000009462	PRPF19	100	84.950	ENSMZEG00005013356	prpf19	100	84.950	Maylandia_zebra
ENSSHAG00000009462	PRPF19	98	90.782	ENSMGAG00000003180	PRPF19	100	90.782	Meleagris_gallopavo
ENSSHAG00000009462	PRPF19	100	98.214	ENSMAUG00000012585	Prpf19	100	98.214	Mesocricetus_auratus
ENSSHAG00000009462	PRPF19	100	99.603	ENSMICG00000011236	PRPF19	100	99.603	Microcebus_murinus
ENSSHAG00000009462	PRPF19	100	99.008	ENSMOCG00000010383	Prpf19	100	99.008	Microtus_ochrogaster
ENSSHAG00000009462	PRPF19	100	84.921	ENSMMOG00000003138	prpf19	100	84.921	Mola_mola
ENSSHAG00000009462	PRPF19	100	99.603	ENSMODG00000020338	PRPF19	100	99.603	Monodelphis_domestica
ENSSHAG00000009462	PRPF19	99	76.803	ENSMALG00000010981	prpf19	99	76.803	Monopterus_albus
ENSSHAG00000009462	PRPF19	100	99.008	MGP_CAROLIEiJ_G0022704	Prpf19	100	99.008	Mus_caroli
ENSSHAG00000009462	PRPF19	100	99.008	ENSMUSG00000024735	Prpf19	100	99.008	Mus_musculus
ENSSHAG00000009462	PRPF19	100	99.008	MGP_PahariEiJ_G0014198	Prpf19	100	99.008	Mus_pahari
ENSSHAG00000009462	PRPF19	100	99.008	MGP_SPRETEiJ_G0023618	Prpf19	100	99.008	Mus_spretus
ENSSHAG00000009462	PRPF19	100	99.008	ENSMPUG00000014432	PRPF19	100	99.008	Mustela_putorius_furo
ENSSHAG00000009462	PRPF19	100	94.990	ENSMLUG00000017597	PRPF19	100	94.990	Myotis_lucifugus
ENSSHAG00000009462	PRPF19	100	98.413	ENSNGAG00000012671	Prpf19	100	98.413	Nannospalax_galili
ENSSHAG00000009462	PRPF19	100	84.950	ENSNBRG00000000055	prpf19	100	84.950	Neolamprologus_brichardi
ENSSHAG00000009462	PRPF19	100	99.603	ENSNLEG00000013618	PRPF19	100	99.603	Nomascus_leucogenys
ENSSHAG00000009462	PRPF19	99	95.372	ENSOPRG00000008630	PRPF19	100	95.372	Ochotona_princeps
ENSSHAG00000009462	PRPF19	100	98.413	ENSODEG00000004043	PRPF19	100	98.413	Octodon_degus
ENSSHAG00000009462	PRPF19	100	84.950	ENSONIG00000004880	prpf19	100	84.950	Oreochromis_niloticus
ENSSHAG00000009462	PRPF19	100	96.212	ENSOCUG00000015689	PRPF19	100	96.212	Oryctolagus_cuniculus
ENSSHAG00000009462	PRPF19	100	84.950	ENSORLG00000004666	prpf19	100	84.950	Oryzias_latipes
ENSSHAG00000009462	PRPF19	100	84.950	ENSORLG00020013561	prpf19	100	84.950	Oryzias_latipes_hni
ENSSHAG00000009462	PRPF19	100	84.950	ENSORLG00015022196	prpf19	100	84.950	Oryzias_latipes_hsok
ENSSHAG00000009462	PRPF19	100	84.158	ENSOMEG00000004424	prpf19	100	84.158	Oryzias_melastigma
ENSSHAG00000009462	PRPF19	100	99.405	ENSOGAG00000016756	PRPF19	100	99.405	Otolemur_garnettii
ENSSHAG00000009462	PRPF19	100	99.405	ENSOARG00000015596	PRPF19	100	99.405	Ovis_aries
ENSSHAG00000009462	PRPF19	99	97.053	ENSPPAG00000030246	PRPF19	100	97.053	Pan_paniscus
ENSSHAG00000009462	PRPF19	100	99.008	ENSPPRG00000002470	PRPF19	100	99.008	Panthera_pardus
ENSSHAG00000009462	PRPF19	99	98.994	ENSPTIG00000006541	PRPF19	99	98.994	Panthera_tigris_altaica
ENSSHAG00000009462	PRPF19	100	99.603	ENSPTRG00000003724	PRPF19	100	99.603	Pan_troglodytes
ENSSHAG00000009462	PRPF19	100	99.603	ENSPANG00000002762	PRPF19	100	99.603	Papio_anubis
ENSSHAG00000009462	PRPF19	100	84.950	ENSPKIG00000019715	prpf19	100	84.950	Paramormyrops_kingsleyae
ENSSHAG00000009462	PRPF19	83	97.375	ENSPSIG00000007497	PRPF19	100	97.375	Pelodiscus_sinensis
ENSSHAG00000009462	PRPF19	54	31.111	ENSPMGG00000006948	wdr36	54	31.111	Periophthalmus_magnuspinnatus
ENSSHAG00000009462	PRPF19	100	84.921	ENSPMGG00000017527	prpf19	100	84.921	Periophthalmus_magnuspinnatus
ENSSHAG00000009462	PRPF19	100	97.817	ENSPEMG00000019270	Prpf19	100	97.817	Peromyscus_maniculatus_bairdii
ENSSHAG00000009462	PRPF19	99	99.143	ENSPCIG00000003485	PRPF19	79	99.143	Phascolarctos_cinereus
ENSSHAG00000009462	PRPF19	100	84.158	ENSPFOG00000002558	prpf19	100	84.158	Poecilia_formosa
ENSSHAG00000009462	PRPF19	100	84.158	ENSPLAG00000017942	prpf19	100	84.158	Poecilia_latipinna
ENSSHAG00000009462	PRPF19	100	84.158	ENSPMEG00000008638	prpf19	100	84.158	Poecilia_mexicana
ENSSHAG00000009462	PRPF19	100	86.364	ENSPREG00000002489	prpf19	96	86.364	Poecilia_reticulata
ENSSHAG00000009462	PRPF19	100	97.938	ENSPPYG00000003202	PRPF19	92	97.938	Pongo_abelii
ENSSHAG00000009462	PRPF19	100	99.008	ENSPCAG00000001930	PRPF19	100	99.008	Procavia_capensis
ENSSHAG00000009462	PRPF19	100	99.576	ENSPCOG00000014017	PRPF19	100	99.576	Propithecus_coquereli
ENSSHAG00000009462	PRPF19	100	99.206	ENSPVAG00000014669	PRPF19	100	99.206	Pteropus_vampyrus
ENSSHAG00000009462	PRPF19	100	84.950	ENSPNYG00000000859	prpf19	100	84.950	Pundamilia_nyererei
ENSSHAG00000009462	PRPF19	100	86.139	ENSPNAG00000019245	prpf19	100	86.139	Pygocentrus_nattereri
ENSSHAG00000009462	PRPF19	100	99.008	ENSRNOG00000020897	Prpf19	100	99.008	Rattus_norvegicus
ENSSHAG00000009462	PRPF19	100	99.603	ENSRBIG00000036672	PRPF19	100	99.603	Rhinopithecus_bieti
ENSSHAG00000009462	PRPF19	100	99.603	ENSRROG00000041572	PRPF19	100	99.603	Rhinopithecus_roxellana
ENSSHAG00000009462	PRPF19	100	99.405	ENSSBOG00000022840	PRPF19	100	99.405	Saimiri_boliviensis_boliviensis
ENSSHAG00000009462	PRPF19	100	83.135	ENSSFOG00015001236	prpf19	100	83.135	Scleropages_formosus
ENSSHAG00000009462	PRPF19	100	85.743	ENSSMAG00000002273	prpf19	100	85.743	Scophthalmus_maximus
ENSSHAG00000009462	PRPF19	100	85.545	ENSSDUG00000003299	prpf19	100	85.545	Seriola_dumerili
ENSSHAG00000009462	PRPF19	100	85.545	ENSSLDG00000003019	prpf19	100	85.545	Seriola_lalandi_dorsalis
ENSSHAG00000009462	PRPF19	100	97.024	ENSSPUG00000019328	PRPF19	100	97.024	Sphenodon_punctatus
ENSSHAG00000009462	PRPF19	100	85.743	ENSSPAG00000008546	prpf19	100	85.743	Stegastes_partitus
ENSSHAG00000009462	PRPF19	100	99.206	ENSSSCG00000013107	PRPF19	100	99.206	Sus_scrofa
ENSSHAG00000009462	PRPF19	100	97.619	ENSTGUG00000006319	PRPF19	100	97.619	Taeniopygia_guttata
ENSSHAG00000009462	PRPF19	100	84.356	ENSTRUG00000008502	prpf19	100	84.356	Takifugu_rubripes
ENSSHAG00000009462	PRPF19	100	68.119	ENSTNIG00000014219	prpf19	100	68.119	Tetraodon_nigroviridis
ENSSHAG00000009462	PRPF19	100	99.008	ENSTTRG00000012476	PRPF19	100	99.008	Tursiops_truncatus
ENSSHAG00000009462	PRPF19	100	99.008	ENSUAMG00000011280	PRPF19	100	99.008	Ursus_americanus
ENSSHAG00000009462	PRPF19	84	98.578	ENSUMAG00000011609	PRPF19	85	96.998	Ursus_maritimus
ENSSHAG00000009462	PRPF19	99	98.678	ENSVPAG00000010516	PRPF19	100	98.678	Vicugna_pacos
ENSSHAG00000009462	PRPF19	100	99.008	ENSVVUG00000005291	PRPF19	100	99.008	Vulpes_vulpes
ENSSHAG00000009462	PRPF19	100	85.421	ENSXETG00000011938	prpf19	100	85.421	Xenopus_tropicalis
ENSSHAG00000009462	PRPF19	100	84.158	ENSXCOG00000003141	prpf19	100	84.158	Xiphophorus_couchianus
ENSSHAG00000009462	PRPF19	100	84.356	ENSXMAG00000008485	prpf19	100	84.356	Xiphophorus_maculatus