EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000009492 (Gene tree)
Gene ID: 100923120
Gene Symbol: STAU1
Alias: PPP1R150|STAU
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 35899 bases
Position: chrGL834670.1:550476-586374
Accession: 100923120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000011016	dsrm	PF00035.26	7.8e-48	1	4
ENSSHAP00000011016	dsrm	PF00035.26	7.8e-48	2	4
ENSSHAP00000011016	dsrm	PF00035.26	7.8e-48	3	4
ENSSHAP00000011016	dsrm	PF00035.26	7.8e-48	4	4
ENSSHAP00000011017	dsrm	PF00035.26	3e-33	1	3
ENSSHAP00000011017	dsrm	PF00035.26	3e-33	2	3
ENSSHAP00000011017	dsrm	PF00035.26	3e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000011110	STAU1-201	2094	-	ENSSHAP00000011016	669 (aa)	XP_012395185	G3W6G1
ENSSHAT00000011111	STAU1-202	1812	-	ENSSHAP00000011017	589 (aa)	-	G3W6G2

Gene Model

Click here to download ENSSHAG00000009492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000009492's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000009492	STAU1	50	44.660	ENSSHAG00000012057	-	90	45.192

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000009492	STAU1	97	93.717	ENSG00000124214	STAU1	100	93.548	Homo_sapiens
ENSSHAG00000009492	STAU1	96	73.879	ENSAPOG00000017260	stau1	96	72.761	Acanthochromis_polyacanthus
ENSSHAG00000009492	STAU1	99	92.157	ENSAMEG00000013681	STAU1	96	92.277	Ailuropoda_melanoleuca
ENSSHAG00000009492	STAU1	97	76.342	ENSACIG00000015918	stau1	96	76.984	Amphilophus_citrinellus
ENSSHAG00000009492	STAU1	99	73.373	ENSAOCG00000012224	stau1	96	74.115	Amphiprion_ocellaris
ENSSHAG00000009492	STAU1	99	73.521	ENSAPEG00000012308	stau1	96	74.302	Amphiprion_percula
ENSSHAG00000009492	STAU1	97	76.321	ENSATEG00000024600	stau1	99	76.321	Anabas_testudineus
ENSSHAG00000009492	STAU1	99	93.294	ENSAPLG00000010527	STAU1	94	93.738	Anas_platyrhynchos
ENSSHAG00000009492	STAU1	98	93.164	ENSACAG00000015909	STAU1	96	93.164	Anolis_carolinensis
ENSSHAG00000009492	STAU1	99	91.013	ENSANAG00000032714	STAU1	99	92.573	Aotus_nancymaae
ENSSHAG00000009492	STAU1	97	75.581	ENSACLG00000012270	stau1	96	75.581	Astatotilapia_calliptera
ENSSHAG00000009492	STAU1	98	72.117	ENSAMXG00000016812	stau1	99	72.862	Astyanax_mexicanus
ENSSHAG00000009492	STAU1	99	91.749	ENSBTAG00000000241	STAU1	99	91.972	Bos_taurus
ENSSHAG00000009492	STAU1	97	93.543	ENSCJAG00000016233	STAU1	99	93.543	Callithrix_jacchus
ENSSHAG00000009492	STAU1	100	92.724	ENSCAFG00000011347	STAU1	100	92.724	Canis_familiaris
ENSSHAG00000009492	STAU1	99	91.988	ENSCAFG00020017123	STAU1	100	91.749	Canis_lupus_dingo
ENSSHAG00000009492	STAU1	97	91.972	ENSCHIG00000001799	-	99	91.972	Capra_hircus
ENSSHAG00000009492	STAU1	99	90.570	ENSTSYG00000036179	-	99	90.570	Carlito_syrichta
ENSSHAG00000009492	STAU1	84	89.315	ENSCAPG00000017041	STAU1	100	89.315	Cavia_aperea
ENSSHAG00000009492	STAU1	83	88.283	ENSCPOG00000005566	STAU1	100	88.283	Cavia_porcellus
ENSSHAG00000009492	STAU1	97	92.746	ENSCCAG00000034339	STAU1	99	92.746	Cebus_capucinus
ENSSHAG00000009492	STAU1	99	93.089	ENSCATG00000028474	STAU1	99	93.717	Cercocebus_atys
ENSSHAG00000009492	STAU1	84	75.100	ENSCLAG00000002784	-	100	75.100	Chinchilla_lanigera
ENSSHAG00000009492	STAU1	83	91.515	ENSCLAG00000006516	-	100	91.515	Chinchilla_lanigera
ENSSHAG00000009492	STAU1	84	93.347	ENSCSAG00000014986	STAU1	100	93.347	Chlorocebus_sabaeus
ENSSHAG00000009492	STAU1	97	93.380	ENSCHOG00000001511	STAU1	99	93.380	Choloepus_hoffmanni
ENSSHAG00000009492	STAU1	99	93.155	ENSCPBG00000026741	STAU1	96	93.155	Chrysemys_picta_bellii
ENSSHAG00000009492	STAU1	97	93.543	ENSCANG00000039220	STAU1	99	93.543	Colobus_angolensis_palliatus
ENSSHAG00000009492	STAU1	83	86.667	ENSCGRG00001013453	Stau1	100	86.667	Cricetulus_griseus_chok1gshd
ENSSHAG00000009492	STAU1	83	86.667	ENSCGRG00000007216	Stau1	100	86.667	Cricetulus_griseus_crigri
ENSSHAG00000009492	STAU1	99	65.351	ENSCSEG00000000792	stau1	96	66.035	Cynoglossus_semilaevis
ENSSHAG00000009492	STAU1	99	70.992	ENSCVAG00000005906	stau1	99	71.619	Cyprinodon_variegatus
ENSSHAG00000009492	STAU1	97	75.728	ENSDARG00000044182	stau1	96	75.728	Danio_rerio
ENSSHAG00000009492	STAU1	100	93.581	ENSDNOG00000014933	STAU1	100	93.581	Dasypus_novemcinctus
ENSSHAG00000009492	STAU1	84	87.117	ENSDORG00000030220	Stau1	100	87.117	Dipodomys_ordii
ENSSHAG00000009492	STAU1	85	91.960	ENSETEG00000018235	STAU1	87	91.960	Echinops_telfairi
ENSSHAG00000009492	STAU1	99	92.101	ENSEASG00005023343	STAU1	100	92.101	Equus_asinus_asinus
ENSSHAG00000009492	STAU1	99	93.253	ENSECAG00000012894	STAU1	99	93.543	Equus_caballus
ENSSHAG00000009492	STAU1	78	96.875	ENSEEUG00000014344	STAU1	80	96.875	Erinaceus_europaeus
ENSSHAG00000009492	STAU1	97	74.904	ENSELUG00000002529	stau1	94	75.325	Esox_lucius
ENSSHAG00000009492	STAU1	99	91.691	ENSFCAG00000001447	STAU1	99	93.019	Felis_catus
ENSSHAG00000009492	STAU1	99	92.793	ENSFALG00000012940	STAU1	96	92.793	Ficedula_albicollis
ENSSHAG00000009492	STAU1	83	90.505	ENSFDAG00000014119	-	100	90.505	Fukomys_damarensis
ENSSHAG00000009492	STAU1	84	70.624	ENSFDAG00000020837	-	100	70.624	Fukomys_damarensis
ENSSHAG00000009492	STAU1	99	71.746	ENSFHEG00000013517	stau1	99	74.067	Fundulus_heteroclitus
ENSSHAG00000009492	STAU1	99	63.203	ENSGMOG00000016850	stau1	96	63.203	Gadus_morhua
ENSSHAG00000009492	STAU1	99	94.144	ENSGALG00000004736	STAU1	96	94.862	Gallus_gallus
ENSSHAG00000009492	STAU1	96	73.920	ENSGAFG00000010437	stau1	96	74.514	Gambusia_affinis
ENSSHAG00000009492	STAU1	97	74.231	ENSGACG00000001352	stau1	96	72.626	Gasterosteus_aculeatus
ENSSHAG00000009492	STAU1	99	93.994	ENSGAGG00000009825	STAU1	96	94.071	Gopherus_agassizii
ENSSHAG00000009492	STAU1	99	87.259	ENSGGOG00000025351	STAU1	100	93.973	Gorilla_gorilla
ENSSHAG00000009492	STAU1	97	75.775	ENSHBUG00000023668	stau1	96	75.775	Haplochromis_burtoni
ENSSHAG00000009492	STAU1	83	92.434	ENSHGLG00000008730	STAU1	100	92.434	Heterocephalus_glaber_female
ENSSHAG00000009492	STAU1	83	92.434	ENSHGLG00100000098	STAU1	100	92.434	Heterocephalus_glaber_male
ENSSHAG00000009492	STAU1	96	71.894	ENSHCOG00000018461	stau1	96	72.710	Hippocampus_comes
ENSSHAG00000009492	STAU1	96	73.250	ENSIPUG00000023725	stau1	96	75.983	Ictalurus_punctatus
ENSSHAG00000009492	STAU1	83	91.411	ENSSTOG00000003634	STAU1	100	91.411	Ictidomys_tridecemlineatus
ENSSHAG00000009492	STAU1	83	89.571	ENSJJAG00000020032	Stau1	100	89.571	Jaculus_jaculus
ENSSHAG00000009492	STAU1	96	71.981	ENSKMAG00000007135	stau1	93	73.725	Kryptolebias_marmoratus
ENSSHAG00000009492	STAU1	99	71.576	ENSLBEG00000020172	stau1	96	72.458	Labrus_bergylta
ENSSHAG00000009492	STAU1	99	85.546	ENSLACG00000016157	STAU1	96	86.471	Latimeria_chalumnae
ENSSHAG00000009492	STAU1	99	78.009	ENSLOCG00000003134	stau1	96	78.009	Lepisosteus_oculatus
ENSSHAG00000009492	STAU1	86	92.338	ENSLAFG00000003238	STAU1	100	92.338	Loxodonta_africana
ENSSHAG00000009492	STAU1	99	93.089	ENSMFAG00000040931	STAU1	100	95.588	Macaca_fascicularis
ENSSHAG00000009492	STAU1	99	86.502	ENSMMUG00000002302	STAU1	100	95.588	Macaca_mulatta
ENSSHAG00000009492	STAU1	99	91.898	ENSMNEG00000033821	STAU1	99	93.717	Macaca_nemestrina
ENSSHAG00000009492	STAU1	97	93.892	ENSMLEG00000031383	STAU1	99	93.892	Mandrillus_leucophaeus
ENSSHAG00000009492	STAU1	99	73.472	ENSMAMG00000017586	stau1	99	74.621	Mastacembelus_armatus
ENSSHAG00000009492	STAU1	99	72.593	ENSMZEG00005015605	stau1	96	72.963	Maylandia_zebra
ENSSHAG00000009492	STAU1	99	93.145	ENSMGAG00000004719	STAU1	94	93.542	Meleagris_gallopavo
ENSSHAG00000009492	STAU1	83	86.263	ENSMAUG00000013846	Stau1	100	86.263	Mesocricetus_auratus
ENSSHAG00000009492	STAU1	97	91.192	ENSMICG00000001995	STAU1	99	91.192	Microcebus_murinus
ENSSHAG00000009492	STAU1	83	87.321	ENSMOCG00000018743	Stau1	100	87.273	Microtus_ochrogaster
ENSSHAG00000009492	STAU1	92	73.473	ENSMMOG00000015455	stau1	99	74.699	Mola_mola
ENSSHAG00000009492	STAU1	100	99.552	ENSMODG00000016276	STAU1	100	99.804	Monodelphis_domestica
ENSSHAG00000009492	STAU1	99	72.889	ENSMALG00000000045	stau1	96	73.694	Monopterus_albus
ENSSHAG00000009492	STAU1	83	88.139	MGP_CAROLIEiJ_G0024699	Stau1	100	88.139	Mus_caroli
ENSSHAG00000009492	STAU1	83	87.526	ENSMUSG00000039536	Stau1	100	87.526	Mus_musculus
ENSSHAG00000009492	STAU1	83	87.526	MGP_PahariEiJ_G0026141	Stau1	100	87.526	Mus_pahari
ENSSHAG00000009492	STAU1	83	87.117	MGP_SPRETEiJ_G0025619	Stau1	100	87.117	Mus_spretus
ENSSHAG00000009492	STAU1	99	92.157	ENSMPUG00000017581	STAU1	100	92.277	Mustela_putorius_furo
ENSSHAG00000009492	STAU1	100	92.047	ENSMLUG00000008407	STAU1	100	92.047	Myotis_lucifugus
ENSSHAG00000009492	STAU1	83	89.899	ENSNGAG00000007108	Stau1	100	89.899	Nannospalax_galili
ENSSHAG00000009492	STAU1	97	75.775	ENSNBRG00000017596	stau1	96	75.775	Neolamprologus_brichardi
ENSSHAG00000009492	STAU1	97	93.194	ENSNLEG00000006955	STAU1	99	93.194	Nomascus_leucogenys
ENSSHAG00000009492	STAU1	98	91.130	ENSMEUG00000003263	STAU1	92	100.000	Notamacropus_eugenii
ENSSHAG00000009492	STAU1	99	88.802	ENSOPRG00000014569	STAU1	100	88.802	Ochotona_princeps
ENSSHAG00000009492	STAU1	84	91.935	ENSODEG00000006523	STAU1	100	92.137	Octodon_degus
ENSSHAG00000009492	STAU1	97	75.969	ENSONIG00000004152	stau1	95	75.969	Oreochromis_niloticus
ENSSHAG00000009492	STAU1	99	92.388	ENSOANG00000006394	STAU1	96	92.578	Ornithorhynchus_anatinus
ENSSHAG00000009492	STAU1	99	90.373	ENSOCUG00000006214	STAU1	99	89.529	Oryctolagus_cuniculus
ENSSHAG00000009492	STAU1	99	71.726	ENSOMEG00000002388	stau1	96	71.857	Oryzias_melastigma
ENSSHAG00000009492	STAU1	100	91.371	ENSOGAG00000002127	STAU1	100	91.371	Otolemur_garnettii
ENSSHAG00000009492	STAU1	84	63.911	ENSOGAG00000028222	-	99	63.911	Otolemur_garnettii
ENSSHAG00000009492	STAU1	100	91.540	ENSOARG00000012204	STAU1	100	91.540	Ovis_aries
ENSSHAG00000009492	STAU1	97	88.316	ENSPPAG00000032023	STAU1	100	93.973	Pan_paniscus
ENSSHAG00000009492	STAU1	97	92.845	ENSPPRG00000003436	STAU1	100	93.145	Panthera_pardus
ENSSHAG00000009492	STAU1	97	92.845	ENSPTIG00000011768	STAU1	100	91.849	Panthera_tigris_altaica
ENSSHAG00000009492	STAU1	97	88.316	ENSPTRG00000023130	STAU1	100	93.973	Pan_troglodytes
ENSSHAG00000009492	STAU1	99	92.873	ENSPANG00000020560	STAU1	99	93.543	Papio_anubis
ENSSHAG00000009492	STAU1	99	74.156	ENSPKIG00000024588	stau1	96	74.397	Paramormyrops_kingsleyae
ENSSHAG00000009492	STAU1	99	93.544	ENSPSIG00000010731	STAU1	96	93.874	Pelodiscus_sinensis
ENSSHAG00000009492	STAU1	95	74.574	ENSPMGG00000018553	stau1	99	73.684	Periophthalmus_magnuspinnatus
ENSSHAG00000009492	STAU1	83	86.667	ENSPEMG00000022045	Stau1	100	86.667	Peromyscus_maniculatus_bairdii
ENSSHAG00000009492	STAU1	100	98.519	ENSPCIG00000023269	STAU1	99	98.962	Phascolarctos_cinereus
ENSSHAG00000009492	STAU1	99	72.674	ENSPFOG00000017253	stau1	96	74.369	Poecilia_formosa
ENSSHAG00000009492	STAU1	59	73.671	ENSPLAG00000014829	stau1	96	71.466	Poecilia_latipinna
ENSSHAG00000009492	STAU1	95	72.093	ENSPMEG00000007495	stau1	94	73.706	Poecilia_mexicana
ENSSHAG00000009492	STAU1	99	72.083	ENSPREG00000003477	stau1	96	73.786	Poecilia_reticulata
ENSSHAG00000009492	STAU1	97	93.368	ENSPPYG00000011111	STAU1	99	93.368	Pongo_abelii
ENSSHAG00000009492	STAU1	92	85.185	ENSPCAG00000002459	STAU1	99	85.185	Procavia_capensis
ENSSHAG00000009492	STAU1	97	92.496	ENSPCOG00000027746	STAU1	99	92.496	Propithecus_coquereli
ENSSHAG00000009492	STAU1	87	92.739	ENSPVAG00000015019	STAU1	86	92.739	Pteropus_vampyrus
ENSSHAG00000009492	STAU1	97	75.775	ENSPNYG00000014436	stau1	96	75.775	Pundamilia_nyererei
ENSSHAG00000009492	STAU1	97	74.275	ENSPNAG00000011323	stau1	96	74.662	Pygocentrus_nattereri
ENSSHAG00000009492	STAU1	83	86.667	ENSRNOG00000007781	Stau1	100	86.667	Rattus_norvegicus
ENSSHAG00000009492	STAU1	84	92.742	ENSRBIG00000037345	STAU1	100	92.742	Rhinopithecus_bieti
ENSSHAG00000009492	STAU1	99	91.898	ENSRROG00000039008	STAU1	100	92.786	Rhinopithecus_roxellana
ENSSHAG00000009492	STAU1	97	92.746	ENSSBOG00000034448	STAU1	99	92.746	Saimiri_boliviensis_boliviensis
ENSSHAG00000009492	STAU1	99	75.261	ENSSFOG00015021497	stau1	96	75.701	Scleropages_formosus
ENSSHAG00000009492	STAU1	99	72.889	ENSSMAG00000017410	stau1	96	73.507	Scophthalmus_maximus
ENSSHAG00000009492	STAU1	99	73.778	ENSSDUG00000019439	stau1	96	74.440	Seriola_dumerili
ENSSHAG00000009492	STAU1	96	75.580	ENSSLDG00000025040	stau1	96	74.440	Seriola_lalandi_dorsalis
ENSSHAG00000009492	STAU1	62	90.588	ENSSARG00000010389	-	63	91.111	Sorex_araneus
ENSSHAG00000009492	STAU1	99	93.006	ENSSPUG00000017983	STAU1	100	92.955	Sphenodon_punctatus
ENSSHAG00000009492	STAU1	96	75.116	ENSSPAG00000019275	stau1	96	73.881	Stegastes_partitus
ENSSHAG00000009492	STAU1	97	93.543	ENSSSCG00000027444	STAU1	100	93.347	Sus_scrofa
ENSSHAG00000009492	STAU1	99	92.411	ENSTGUG00000008784	STAU1	94	92.411	Taeniopygia_guttata
ENSSHAG00000009492	STAU1	96	74.534	ENSTRUG00000005837	stau1	96	76.908	Takifugu_rubripes
ENSSHAG00000009492	STAU1	95	73.643	ENSTNIG00000014732	stau1	95	74.038	Tetraodon_nigroviridis
ENSSHAG00000009492	STAU1	98	78.856	ENSTBEG00000009404	STAU1	100	78.856	Tupaia_belangeri
ENSSHAG00000009492	STAU1	97	82.897	ENSTTRG00000004285	STAU1	91	96.875	Tursiops_truncatus
ENSSHAG00000009492	STAU1	84	91.252	ENSUAMG00000025449	STAU1	100	91.252	Ursus_americanus
ENSSHAG00000009492	STAU1	63	88.889	ENSUMAG00000024475	STAU1	89	88.889	Ursus_maritimus
ENSSHAG00000009492	STAU1	97	93.543	ENSVPAG00000001313	STAU1	99	93.543	Vicugna_pacos
ENSSHAG00000009492	STAU1	99	92.136	ENSVVUG00000022325	STAU1	99	92.136	Vulpes_vulpes
ENSSHAG00000009492	STAU1	98	85.996	ENSXETG00000001783	stau1	96	85.030	Xenopus_tropicalis
ENSSHAG00000009492	STAU1	55	73.243	ENSXCOG00000008804	stau1	98	73.575	Xiphophorus_couchianus
ENSSHAG00000009492	STAU1	99	72.189	ENSXMAG00000016175	stau1	96	74.125	Xiphophorus_maculatus