EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSHAG00000009525 (Gene tree)
Gene ID
-
Gene Symbol
LIG4
Alias
-
Full Name
DNA ligase 4
Gene Type
protein_coding
Species
Sarcophilus_harrisii
Status
putative
Strand
Plus strand
Length
2736 bases
Position
chrGL849846.1:554708-557443
Accession
6601
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSHAP00000011058RNA_ligasePF09414.101.3e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSHAT00000011152LIG4-2012682-ENSSHAP00000011058893 (aa)-G3W6K3
Gene Model
Click here to download ENSSHAG00000009525's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000009525's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSHAG00000009525LIG410081.250ENSG00000174405LIG410080.687Homo_sapiens
ENSSHAG00000009525LIG49962.898ENSAPOG00000000866lig49962.788Acanthochromis_polyacanthus
ENSSHAG00000009525LIG410079.057ENSAMEG00000019685LIG49979.057Ailuropoda_melanoleuca
ENSSHAG00000009525LIG49963.736ENSACIG00000018309lig49963.846Amphilophus_citrinellus
ENSSHAG00000009525LIG49963.274ENSAOCG00000011768lig49963.164Amphiprion_ocellaris
ENSSHAG00000009525LIG49963.385ENSAPEG00000017815lig49963.274Amphiprion_percula
ENSSHAG00000009525LIG49963.337ENSATEG00000005583lig49963.117Anabas_testudineus
ENSSHAG00000009525LIG49774.774ENSAPLG00000001673LIG49974.066Anas_platyrhynchos
ENSSHAG00000009525LIG49974.226ENSACAG00000014566LIG49974.226Anolis_carolinensis
ENSSHAG00000009525LIG410080.132ENSANAG00000012446LIG410080.132Aotus_nancymaae
ENSSHAG00000009525LIG49963.527ENSACLG00000027051lig49963.736Astatotilapia_calliptera
ENSSHAG00000009525LIG49962.227ENSAMXG00000008192lig49461.858Astyanax_mexicanus
ENSSHAG00000009525LIG410079.605ENSBTAG00000015868LIG410079.034Bos_taurus
ENSSHAG00000009525LIG410079.693ENSCJAG00000014689LIG410079.693Callithrix_jacchus
ENSSHAG00000009525LIG410080.263ENSCAFG00000006031LIG410079.693Canis_familiaris
ENSSHAG00000009525LIG410080.263ENSCAFG00020021230LIG410079.693Canis_lupus_dingo
ENSSHAG00000009525LIG410079.167ENSCHIG00000001019LIG410078.595Capra_hircus
ENSSHAG00000009525LIG49978.761ENSCAPG00000006284LIG49978.295Cavia_aperea
ENSSHAG00000009525LIG410078.509ENSCPOG00000014266LIG410078.046Cavia_porcellus
ENSSHAG00000009525LIG410080.592ENSCCAG00000019971LIG410080.022Cebus_capucinus
ENSSHAG00000009525LIG410080.592ENSCATG00000021075LIG410080.022Cercocebus_atys
ENSSHAG00000009525LIG410079.825ENSCLAG00000003376LIG410079.825Chinchilla_lanigera
ENSSHAG00000009525LIG410080.702ENSCSAG00000000211LIG410080.132Chlorocebus_sabaeus
ENSSHAG00000009525LIG49977.263ENSCPBG00000023291LIG49976.645Chrysemys_picta_bellii
ENSSHAG00000009525LIG46943.994ENSCING00000009536-9544.089Ciona_intestinalis
ENSSHAG00000009525LIG48343.890ENSCSAVG00000010336-9843.890Ciona_savignyi
ENSSHAG00000009525LIG410080.154ENSCANG00000005805LIG410079.583Colobus_angolensis_palliatus
ENSSHAG00000009525LIG410078.423ENSCGRG00001012072Lig410078.313Cricetulus_griseus_chok1gshd
ENSSHAG00000009525LIG410078.423ENSCGRG00000013417Lig410078.313Cricetulus_griseus_crigri
ENSSHAG00000009525LIG49763.288ENSCSEG00000013905lig49663.288Cynoglossus_semilaevis
ENSSHAG00000009525LIG49964.388ENSCVAG00000007896lig49963.797Cyprinodon_variegatus
ENSSHAG00000009525LIG49961.683ENSDARG00000060620lig49861.308Danio_rerio
ENSSHAG00000009525LIG410080.702ENSDNOG00000000513LIG410080.702Dasypus_novemcinctus
ENSSHAG00000009525LIG410079.167ENSDORG00000027303Lig410078.814Dipodomys_ordii
ENSSHAG00000009525LIG48830.506FBgn0030506Lig49030.271Drosophila_melanogaster
ENSSHAG00000009525LIG49978.405ENSETEG00000015563LIG410078.405Echinops_telfairi
ENSSHAG00000009525LIG49941.994ENSEBUG00000014243lig49841.994Eptatretus_burgeri
ENSSHAG00000009525LIG410080.373ENSEASG00005022073LIG410079.693Equus_asinus_asinus
ENSSHAG00000009525LIG410079.825ENSECAG00000003257LIG410079.144Equus_caballus
ENSSHAG00000009525LIG49964.088ENSELUG00000006787lig49964.199Esox_lucius
ENSSHAG00000009525LIG410079.276ENSFCAG00000031985LIG410078.705Felis_catus
ENSSHAG00000009525LIG48874.816ENSFALG00000004214LIG49874.170Ficedula_albicollis
ENSSHAG00000009525LIG410079.386ENSFDAG00000008973LIG410078.924Fukomys_damarensis
ENSSHAG00000009525LIG49963.337ENSFHEG00000007398lig49063.256Fundulus_heteroclitus
ENSSHAG00000009525LIG48560.897ENSGMOG00000012843lig49960.897Gadus_morhua
ENSSHAG00000009525LIG49973.904ENSGALG00000016854LIG49973.436Gallus_gallus
ENSSHAG00000009525LIG49963.960ENSGAFG00000019779lig49563.187Gambusia_affinis
ENSSHAG00000009525LIG49961.665ENSGACG00000014135lig49961.665Gasterosteus_aculeatus
ENSSHAG00000009525LIG410081.031ENSGGOG00000027771LIG410080.461Gorilla_gorilla
ENSSHAG00000009525LIG49963.417ENSHBUG00000006245lig49963.626Haplochromis_burtoni
ENSSHAG00000009525LIG410079.496ENSHGLG00000000718LIG410079.034Heterocephalus_glaber_female
ENSSHAG00000009525LIG410079.496ENSHGLG00100003265LIG410079.034Heterocephalus_glaber_male
ENSSHAG00000009525LIG49961.868ENSHCOG00000012010lig49961.868Hippocampus_comes
ENSSHAG00000009525LIG49963.089ENSIPUG00000013748lig49962.939Ictalurus_punctatus
ENSSHAG00000009525LIG410079.605ENSSTOG00000024303LIG410079.144Ictidomys_tridecemlineatus
ENSSHAG00000009525LIG410077.412ENSJJAG00000006750Lig410077.961Jaculus_jaculus
ENSSHAG00000009525LIG49962.611ENSKMAG00000001149lig49962.279Kryptolebias_marmoratus
ENSSHAG00000009525LIG49162.785ENSLBEG00000014578lig410062.665Labrus_bergylta
ENSSHAG00000009525LIG49970.925ENSLACG00000003282LIG49970.925Latimeria_chalumnae
ENSSHAG00000009525LIG49967.618ENSLOCG00000008901lig49867.253Lepisosteus_oculatus
ENSSHAG00000009525LIG410079.299ENSLAFG00000031152LIG410079.299Loxodonta_africana
ENSSHAG00000009525LIG410080.702ENSMFAG00000037235LIG410080.132Macaca_fascicularis
ENSSHAG00000009525LIG410080.482ENSMMUG00000008874LIG410079.912Macaca_mulatta
ENSSHAG00000009525LIG410080.702ENSMNEG00000023575LIG410080.132Macaca_nemestrina
ENSSHAG00000009525LIG410080.811ENSMLEG00000026720LIG410080.241Mandrillus_leucophaeus
ENSSHAG00000009525LIG49964.325ENSMAMG00000008472lig49964.435Mastacembelus_armatus
ENSSHAG00000009525LIG49963.626ENSMZEG00005001855lig49963.626Maylandia_zebra
ENSSHAG00000009525LIG410074.264ENSMGAG00000015532LIG410073.799Meleagris_gallopavo
ENSSHAG00000009525LIG410076.096ENSMOCG00000019000Lig410075.521Microtus_ochrogaster
ENSSHAG00000009525LIG49961.905ENSMMOG00000004390lig49961.905Mola_mola
ENSSHAG00000009525LIG410089.243ENSMODG00000025064LIG410089.243Monodelphis_domestica
ENSSHAG00000009525LIG49963.274ENSMALG00000008555lig49962.942Monopterus_albus
ENSSHAG00000009525LIG410079.276MGP_CAROLIEiJ_G0030809Lig410079.276Mus_caroli
ENSSHAG00000009525LIG410078.618ENSMUSG00000049717Lig410078.618Mus_musculus
ENSSHAG00000009525LIG410078.728MGP_PahariEiJ_G0021270Lig410078.728Mus_pahari
ENSSHAG00000009525LIG410078.728MGP_SPRETEiJ_G0031917Lig410078.728Mus_spretus
ENSSHAG00000009525LIG410078.947ENSMPUG00000018675LIG410078.375Mustela_putorius_furo
ENSSHAG00000009525LIG410080.154ENSMLUG00000001267LIG410079.583Myotis_lucifugus
ENSSHAG00000009525LIG410078.180ENSNGAG00000013258Lig410077.717Nannospalax_galili
ENSSHAG00000009525LIG49963.308ENSNBRG00000021252lig49963.516Neolamprologus_brichardi
ENSSHAG00000009525LIG410080.592ENSNLEG00000007888LIG410080.022Nomascus_leucogenys
ENSSHAG00000009525LIG410077.632ENSOPRG00000005765LIG410077.058Ochotona_princeps
ENSSHAG00000009525LIG410076.948ENSODEG00000019683LIG410076.948Octodon_degus
ENSSHAG00000009525LIG49963.516ENSONIG00000011969lig49863.626Oreochromis_niloticus
ENSSHAG00000009525LIG410079.605ENSOCUG00000015734LIG410079.144Oryctolagus_cuniculus
ENSSHAG00000009525LIG49961.842ENSORLG00000004041lig49961.842Oryzias_latipes
ENSSHAG00000009525LIG49962.281ENSORLG00020019607lig49962.281Oryzias_latipes_hni
ENSSHAG00000009525LIG49962.061ENSORLG00015017754lig49962.061Oryzias_latipes_hsok
ENSSHAG00000009525LIG47465.593ENSOMEG00000003459lig49964.956Oryzias_melastigma
ENSSHAG00000009525LIG410079.518ENSOGAG00000032120LIG49978.947Otolemur_garnettii
ENSSHAG00000009525LIG48181.099ENSOARG00000005590LIG49880.403Ovis_aries
ENSSHAG00000009525LIG410081.250ENSPPAG00000032998LIG410080.681Pan_paniscus
ENSSHAG00000009525LIG410079.934ENSPPRG00000017804LIG410079.363Panthera_pardus
ENSSHAG00000009525LIG410079.825ENSPTIG00000010051LIG410079.254Panthera_tigris_altaica
ENSSHAG00000009525LIG410081.140ENSPTRG00000006025LIG410080.571Pan_troglodytes
ENSSHAG00000009525LIG410080.702ENSPANG00000007562LIG410080.132Papio_anubis
ENSSHAG00000009525LIG49964.286ENSPKIG00000011645lig49863.916Paramormyrops_kingsleyae
ENSSHAG00000009525LIG49976.645ENSPSIG00000001504LIG49976.180Pelodiscus_sinensis
ENSSHAG00000009525LIG49960.377ENSPMGG00000013486lig49960.417Periophthalmus_magnuspinnatus
ENSSHAG00000009525LIG410077.985ENSPEMG00000000076Lig410077.875Peromyscus_maniculatus_bairdii
ENSSHAG00000009525LIG410091.328ENSPCIG00000021882LIG410091.328Phascolarctos_cinereus
ENSSHAG00000009525LIG49963.889ENSPFOG00000000797lig49963.117Poecilia_formosa
ENSSHAG00000009525LIG49963.778ENSPLAG00000001196lig49963.008Poecilia_latipinna
ENSSHAG00000009525LIG49964.111ENSPMEG00000021353lig49963.337Poecilia_mexicana
ENSSHAG00000009525LIG49963.667ENSPREG00000007323lig49963.008Poecilia_reticulata
ENSSHAG00000009525LIG410080.702ENSPPYG00000005540LIG410080.132Pongo_abelii
ENSSHAG00000009525LIG410080.373ENSPVAG00000016403LIG410079.802Pteropus_vampyrus
ENSSHAG00000009525LIG49963.417ENSPNYG00000009660lig49963.626Pundamilia_nyererei
ENSSHAG00000009525LIG410062.254ENSPNAG00000028056lig410061.884Pygocentrus_nattereri
ENSSHAG00000009525LIG410062.254ENSPNAG00000028069LIG410061.884Pygocentrus_nattereri
ENSSHAG00000009525LIG410077.851ENSRNOG00000014605Lig410077.851Rattus_norvegicus
ENSSHAG00000009525LIG410079.386ENSRBIG00000039962LIG410078.814Rhinopithecus_bieti
ENSSHAG00000009525LIG410080.482ENSRROG00000006040LIG410079.912Rhinopithecus_roxellana
ENSSHAG00000009525LIG410079.693ENSSBOG00000019029LIG410079.693Saimiri_boliviensis_boliviensis
ENSSHAG00000009525LIG49963.164ENSSFOG00015012835lig49962.791Scleropages_formosus
ENSSHAG00000009525LIG49961.615ENSSMAG00000011267lig49961.504Scophthalmus_maximus
ENSSHAG00000009525LIG49964.009ENSSDUG00000010343lig49863.636Seriola_dumerili
ENSSHAG00000009525LIG49962.389ENSSLDG00000003239lig49962.058Seriola_lalandi_dorsalis
ENSSHAG00000009525LIG410075.383ENSSARG00000006573LIG410075.383Sorex_araneus
ENSSHAG00000009525LIG49274.793ENSSPUG00000002444LIG410074.793Sphenodon_punctatus
ENSSHAG00000009525LIG49963.036ENSSPAG00000001609lig49962.926Stegastes_partitus
ENSSHAG00000009525LIG410078.289ENSSSCG00000009540LIG410078.618Sus_scrofa
ENSSHAG00000009525LIG49974.475ENSTGUG00000010795LIG49973.894Taeniopygia_guttata
ENSSHAG00000009525LIG49963.008ENSTRUG00000009984lig49962.857Takifugu_rubripes
ENSSHAG00000009525LIG49963.586ENSTNIG00000010348lig49963.806Tetraodon_nigroviridis
ENSSHAG00000009525LIG410080.571ENSTBEG00000017741LIG410080.571Tupaia_belangeri
ENSSHAG00000009525LIG410079.057ENSTTRG00000012660LIG410079.057Tursiops_truncatus
ENSSHAG00000009525LIG410078.728ENSUAMG00000003773LIG410078.728Ursus_americanus
ENSSHAG00000009525LIG49970.187ENSXETG00000002654lig49969.824Xenopus_tropicalis
ENSSHAG00000009525LIG49963.778ENSXCOG00000017401lig49963.008Xiphophorus_couchianus
ENSSHAG00000009525LIG49963.707ENSXMAG00000015142lig49962.939Xiphophorus_maculatus

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