EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000009548 (Gene tree)
Gene ID: 100916135
Gene Symbol: PRPF3
Alias: Prp3|RP18|SNRNP90|hPrp3
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 25614 bases
Position: chrGL856997.1:556956-582569
Accession: 17348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000011086	PRP3	PF08572.10	5.5e-80	1	1
ENSSHAP00000011086	PWI	PF01480.17	4.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000011180	PRPF3-201	2373	-	ENSSHAP00000011086	684 (aa)	-	G3W6N1

Gene Model

Click here to download ENSSHAG00000009548's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000009548's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000009548	PRPF3	100	98.246	ENSG00000117360	PRPF3	100	98.246	Homo_sapiens
ENSSHAG00000009548	PRPF3	100	71.650	ENSAPOG00000015584	prpf3	99	72.214	Acanthochromis_polyacanthus
ENSSHAG00000009548	PRPF3	100	98.099	ENSAMEG00000001630	PRPF3	100	98.099	Ailuropoda_melanoleuca
ENSSHAG00000009548	PRPF3	100	72.034	ENSACIG00000007876	prpf3	99	71.045	Amphilophus_citrinellus
ENSSHAG00000009548	PRPF3	100	70.945	ENSAOCG00000011449	prpf3	99	72.159	Amphiprion_ocellaris
ENSSHAG00000009548	PRPF3	100	70.839	ENSATEG00000023583	prpf3	99	71.266	Anabas_testudineus
ENSSHAG00000009548	PRPF3	100	95.036	ENSAPLG00000002440	PRPF3	100	95.036	Anas_platyrhynchos
ENSSHAG00000009548	PRPF3	100	92.006	ENSACAG00000003176	PRPF3	100	92.297	Anolis_carolinensis
ENSSHAG00000009548	PRPF3	100	98.246	ENSANAG00000026138	PRPF3	100	98.246	Aotus_nancymaae
ENSSHAG00000009548	PRPF3	100	72.543	ENSACLG00000020127	prpf3	99	72.254	Astatotilapia_calliptera
ENSSHAG00000009548	PRPF3	100	73.840	ENSAMXG00000007306	prpf3	99	73.418	Astyanax_mexicanus
ENSSHAG00000009548	PRPF3	100	98.246	ENSBTAG00000013946	PRPF3	100	98.246	Bos_taurus
ENSSHAG00000009548	PRPF3	81	39.146	WBGene00010844	prp-3	82	39.286	Caenorhabditis_elegans
ENSSHAG00000009548	PRPF3	100	98.246	ENSCJAG00000009926	PRPF3	100	98.246	Callithrix_jacchus
ENSSHAG00000009548	PRPF3	100	98.246	ENSCAFG00000011820	PRPF3	100	98.246	Canis_familiaris
ENSSHAG00000009548	PRPF3	80	98.358	ENSCAFG00020019653	PRPF3	100	98.358	Canis_lupus_dingo
ENSSHAG00000009548	PRPF3	100	98.246	ENSCHIG00000015434	PRPF3	100	98.246	Capra_hircus
ENSSHAG00000009548	PRPF3	100	97.807	ENSTSYG00000001383	PRPF3	100	97.807	Carlito_syrichta
ENSSHAG00000009548	PRPF3	93	81.132	ENSCAPG00000017812	PRPF3	95	81.447	Cavia_aperea
ENSSHAG00000009548	PRPF3	100	97.807	ENSCPOG00000008068	PRPF3	100	97.807	Cavia_porcellus
ENSSHAG00000009548	PRPF3	100	98.246	ENSCCAG00000026380	PRPF3	100	98.246	Cebus_capucinus
ENSSHAG00000009548	PRPF3	100	82.874	ENSCATG00000041778	PRPF3	100	82.874	Cercocebus_atys
ENSSHAG00000009548	PRPF3	100	98.099	ENSCLAG00000015009	PRPF3	100	98.099	Chinchilla_lanigera
ENSSHAG00000009548	PRPF3	77	98.361	ENSCHOG00000011645	PRPF3	77	98.361	Choloepus_hoffmanni
ENSSHAG00000009548	PRPF3	100	96.058	ENSCPBG00000008216	PRPF3	100	96.058	Chrysemys_picta_bellii
ENSSHAG00000009548	PRPF3	61	59.666	ENSCING00000003312	-	99	58.711	Ciona_intestinalis
ENSSHAG00000009548	PRPF3	83	53.860	ENSCSAVG00000008720	-	94	54.611	Ciona_savignyi
ENSSHAG00000009548	PRPF3	100	97.515	ENSCANG00000036769	PRPF3	100	97.515	Colobus_angolensis_palliatus
ENSSHAG00000009548	PRPF3	100	98.246	ENSCGRG00001019100	Prpf3	100	98.246	Cricetulus_griseus_chok1gshd
ENSSHAG00000009548	PRPF3	100	98.246	ENSCGRG00000007322	Prpf3	100	98.246	Cricetulus_griseus_crigri
ENSSHAG00000009548	PRPF3	100	71.910	ENSCSEG00000002532	prpf3	99	70.506	Cynoglossus_semilaevis
ENSSHAG00000009548	PRPF3	100	72.521	ENSCVAG00000009318	prpf3	99	72.238	Cyprinodon_variegatus
ENSSHAG00000009548	PRPF3	100	72.843	ENSDARG00000086425	prpf3	99	72.159	Danio_rerio
ENSSHAG00000009548	PRPF3	100	88.158	ENSDNOG00000005904	PRPF3	100	89.327	Dasypus_novemcinctus
ENSSHAG00000009548	PRPF3	93	97.950	ENSDORG00000008664	Prpf3	100	97.950	Dipodomys_ordii
ENSSHAG00000009548	PRPF3	80	53.086	FBgn0036915	Prp3	99	53.273	Drosophila_melanogaster
ENSSHAG00000009548	PRPF3	100	97.222	ENSETEG00000019124	PRPF3	100	97.222	Echinops_telfairi
ENSSHAG00000009548	PRPF3	100	63.984	ENSEBUG00000011680	prpf3	99	63.984	Eptatretus_burgeri
ENSSHAG00000009548	PRPF3	100	98.099	ENSEASG00005001566	PRPF3	100	98.099	Equus_asinus_asinus
ENSSHAG00000009548	PRPF3	100	98.246	ENSECAG00000019840	PRPF3	100	98.246	Equus_caballus
ENSSHAG00000009548	PRPF3	85	98.592	ENSEEUG00000007338	PRPF3	85	98.592	Erinaceus_europaeus
ENSSHAG00000009548	PRPF3	100	65.670	ENSELUG00000013624	prpf3	99	66.097	Esox_lucius
ENSSHAG00000009548	PRPF3	100	98.246	ENSFCAG00000013940	PRPF3	100	98.246	Felis_catus
ENSSHAG00000009548	PRPF3	100	97.661	ENSFDAG00000010365	PRPF3	100	97.661	Fukomys_damarensis
ENSSHAG00000009548	PRPF3	100	73.027	ENSFHEG00000021746	prpf3	99	72.740	Fundulus_heteroclitus
ENSSHAG00000009548	PRPF3	100	71.045	ENSGMOG00000008535	prpf3	99	70.904	Gadus_morhua
ENSSHAG00000009548	PRPF3	100	94.891	ENSGALG00000028205	PRPF3	100	94.891	Gallus_gallus
ENSSHAG00000009548	PRPF3	100	72.246	ENSGAFG00000012671	prpf3	99	71.960	Gambusia_affinis
ENSSHAG00000009548	PRPF3	100	70.721	ENSGACG00000011792	prpf3	99	71.004	Gasterosteus_aculeatus
ENSSHAG00000009548	PRPF3	100	95.766	ENSGAGG00000013765	PRPF3	100	95.628	Gopherus_agassizii
ENSSHAG00000009548	PRPF3	86	98.381	ENSGGOG00000013174	PRPF3	100	98.381	Gorilla_gorilla
ENSSHAG00000009548	PRPF3	100	72.439	ENSHBUG00000003493	prpf3	99	72.150	Haplochromis_burtoni
ENSSHAG00000009548	PRPF3	100	97.807	ENSHGLG00000016569	PRPF3	100	97.807	Heterocephalus_glaber_female
ENSSHAG00000009548	PRPF3	100	69.152	ENSHGLG00000016033	-	100	69.591	Heterocephalus_glaber_female
ENSSHAG00000009548	PRPF3	100	97.807	ENSHGLG00100007590	PRPF3	100	97.807	Heterocephalus_glaber_male
ENSSHAG00000009548	PRPF3	100	69.591	ENSHGLG00100008951	-	95	89.286	Heterocephalus_glaber_male
ENSSHAG00000009548	PRPF3	100	68.466	ENSHCOG00000014058	prpf3	99	68.182	Hippocampus_comes
ENSSHAG00000009548	PRPF3	100	73.324	ENSIPUG00000000902	PRPF3	99	73.647	Ictalurus_punctatus
ENSSHAG00000009548	PRPF3	100	98.246	ENSSTOG00000001889	PRPF3	100	98.246	Ictidomys_tridecemlineatus
ENSSHAG00000009548	PRPF3	100	70.780	ENSKMAG00000001390	prpf3	99	70.496	Kryptolebias_marmoratus
ENSSHAG00000009548	PRPF3	100	70.308	ENSLBEG00000026310	prpf3	99	71.227	Labrus_bergylta
ENSSHAG00000009548	PRPF3	93	81.975	ENSLACG00000010541	PRPF3	100	82.132	Latimeria_chalumnae
ENSSHAG00000009548	PRPF3	100	98.246	ENSLAFG00000004713	PRPF3	100	98.246	Loxodonta_africana
ENSSHAG00000009548	PRPF3	100	98.246	ENSMFAG00000039791	PRPF3	100	98.246	Macaca_fascicularis
ENSSHAG00000009548	PRPF3	90	98.374	ENSMMUG00000016301	PRPF3	98	98.374	Macaca_mulatta
ENSSHAG00000009548	PRPF3	100	98.246	ENSMNEG00000038161	PRPF3	100	98.246	Macaca_nemestrina
ENSSHAG00000009548	PRPF3	99	65.979	ENSMLEG00000041065	-	98	65.390	Mandrillus_leucophaeus
ENSSHAG00000009548	PRPF3	86	97.976	ENSMLEG00000040609	PRPF3	100	97.976	Mandrillus_leucophaeus
ENSSHAG00000009548	PRPF3	100	71.570	ENSMAMG00000014968	prpf3	99	71.146	Mastacembelus_armatus
ENSSHAG00000009548	PRPF3	100	70.407	ENSMZEG00005015970	prpf3	99	70.266	Maylandia_zebra
ENSSHAG00000009548	PRPF3	100	94.891	ENSMGAG00000000707	PRPF3	100	94.891	Meleagris_gallopavo
ENSSHAG00000009548	PRPF3	100	97.953	ENSMAUG00000017112	Prpf3	100	97.953	Mesocricetus_auratus
ENSSHAG00000009548	PRPF3	100	97.953	ENSMICG00000015386	PRPF3	100	97.953	Microcebus_murinus
ENSSHAG00000009548	PRPF3	100	98.099	ENSMOCG00000000242	Prpf3	100	98.099	Microtus_ochrogaster
ENSSHAG00000009548	PRPF3	100	66.059	ENSMMOG00000016131	prpf3	99	67.044	Mola_mola
ENSSHAG00000009548	PRPF3	100	99.561	ENSMODG00000018774	PRPF3	100	99.561	Monodelphis_domestica
ENSSHAG00000009548	PRPF3	100	70.128	ENSMALG00000007257	prpf3	99	70.128	Monopterus_albus
ENSSHAG00000009548	PRPF3	100	97.807	MGP_CAROLIEiJ_G0025354	Prpf3	100	97.807	Mus_caroli
ENSSHAG00000009548	PRPF3	100	97.807	ENSMUSG00000015748	Prpf3	100	97.807	Mus_musculus
ENSSHAG00000009548	PRPF3	100	97.661	MGP_PahariEiJ_G0026798	Prpf3	100	97.661	Mus_pahari
ENSSHAG00000009548	PRPF3	100	97.807	MGP_SPRETEiJ_G0026298	Prpf3	100	97.807	Mus_spretus
ENSSHAG00000009548	PRPF3	100	95.322	ENSMPUG00000005080	PRPF3	100	95.322	Mustela_putorius_furo
ENSSHAG00000009548	PRPF3	100	97.518	ENSMLUG00000004646	-	100	97.518	Myotis_lucifugus
ENSSHAG00000009548	PRPF3	100	98.246	ENSNGAG00000000910	Prpf3	100	98.246	Nannospalax_galili
ENSSHAG00000009548	PRPF3	100	70.251	ENSNBRG00000003462	prpf3	99	69.972	Neolamprologus_brichardi
ENSSHAG00000009548	PRPF3	90	98.374	ENSNLEG00000009841	PRPF3	100	98.374	Nomascus_leucogenys
ENSSHAG00000009548	PRPF3	82	100.000	ENSMEUG00000008733	PRPF3	89	100.000	Notamacropus_eugenii
ENSSHAG00000009548	PRPF3	100	97.661	ENSOPRG00000010139	PRPF3	100	97.661	Ochotona_princeps
ENSSHAG00000009548	PRPF3	100	97.515	ENSODEG00000011363	-	100	97.515	Octodon_degus
ENSSHAG00000009548	PRPF3	100	72.359	ENSODEG00000014412	-	100	72.359	Octodon_degus
ENSSHAG00000009548	PRPF3	100	70.547	ENSONIG00000006394	prpf3	99	70.407	Oreochromis_niloticus
ENSSHAG00000009548	PRPF3	100	64.877	ENSOANG00000015441	PRPF3	100	64.441	Ornithorhynchus_anatinus
ENSSHAG00000009548	PRPF3	100	98.246	ENSOCUG00000011760	PRPF3	100	98.246	Oryctolagus_cuniculus
ENSSHAG00000009548	PRPF3	100	72.727	ENSORLG00000010330	prpf3	99	71.875	Oryzias_latipes
ENSSHAG00000009548	PRPF3	100	72.727	ENSORLG00020009054	prpf3	99	71.875	Oryzias_latipes_hni
ENSSHAG00000009548	PRPF3	100	72.443	ENSORLG00015015016	prpf3	99	71.591	Oryzias_latipes_hsok
ENSSHAG00000009548	PRPF3	100	72.143	ENSOMEG00000000940	prpf3	99	71.857	Oryzias_melastigma
ENSSHAG00000009548	PRPF3	100	92.409	ENSOGAG00000005352	PRPF3	100	92.409	Otolemur_garnettii
ENSSHAG00000009548	PRPF3	100	98.246	ENSOARG00000020798	PRPF3	100	98.246	Ovis_aries
ENSSHAG00000009548	PRPF3	99	74.667	ENSPPAG00000043769	-	99	74.222	Pan_paniscus
ENSSHAG00000009548	PRPF3	100	98.099	ENSPPAG00000030983	PRPF3	100	98.099	Pan_paniscus
ENSSHAG00000009548	PRPF3	100	98.246	ENSPPRG00000000731	PRPF3	100	98.246	Panthera_pardus
ENSSHAG00000009548	PRPF3	100	98.246	ENSPTIG00000005516	PRPF3	100	98.246	Panthera_tigris_altaica
ENSSHAG00000009548	PRPF3	100	98.246	ENSPTRG00000001254	PRPF3	100	98.246	Pan_troglodytes
ENSSHAG00000009548	PRPF3	99	73.778	ENSPTRG00000047819	-	99	73.333	Pan_troglodytes
ENSSHAG00000009548	PRPF3	100	98.099	ENSPANG00000000499	PRPF3	100	98.099	Papio_anubis
ENSSHAG00000009548	PRPF3	100	73.932	ENSPKIG00000010501	prpf3	99	74.074	Paramormyrops_kingsleyae
ENSSHAG00000009548	PRPF3	100	95.912	ENSPSIG00000014877	PRPF3	100	95.912	Pelodiscus_sinensis
ENSSHAG00000009548	PRPF3	100	67.197	ENSPMGG00000007776	prpf3	99	66.474	Periophthalmus_magnuspinnatus
ENSSHAG00000009548	PRPF3	100	98.246	ENSPEMG00000011672	Prpf3	100	98.246	Peromyscus_maniculatus_bairdii
ENSSHAG00000009548	PRPF3	63	71.918	ENSPMAG00000005588	prpf3	99	69.536	Petromyzon_marinus
ENSSHAG00000009548	PRPF3	100	99.561	ENSPCIG00000008795	PRPF3	100	99.561	Phascolarctos_cinereus
ENSSHAG00000009548	PRPF3	100	72.458	ENSPFOG00000013638	prpf3	99	71.893	Poecilia_formosa
ENSSHAG00000009548	PRPF3	100	72.714	ENSPLAG00000018103	prpf3	99	72.096	Poecilia_latipinna
ENSSHAG00000009548	PRPF3	100	72.571	ENSPMEG00000023546	prpf3	99	72.286	Poecilia_mexicana
ENSSHAG00000009548	PRPF3	100	72.183	ENSPREG00000017216	prpf3	99	71.897	Poecilia_reticulata
ENSSHAG00000009548	PRPF3	75	86.019	ENSPPYG00000018646	-	100	86.019	Pongo_abelii
ENSSHAG00000009548	PRPF3	93	98.113	ENSPPYG00000000900	PRPF3	99	98.113	Pongo_abelii
ENSSHAG00000009548	PRPF3	86	97.462	ENSPCAG00000014908	PRPF3	87	97.462	Procavia_capensis
ENSSHAG00000009548	PRPF3	100	98.099	ENSPCOG00000013828	PRPF3	100	98.099	Propithecus_coquereli
ENSSHAG00000009548	PRPF3	100	97.076	ENSPVAG00000013472	PRPF3	100	97.076	Pteropus_vampyrus
ENSSHAG00000009548	PRPF3	100	72.439	ENSPNYG00000004279	prpf3	99	72.150	Pundamilia_nyererei
ENSSHAG00000009548	PRPF3	100	72.855	ENSPNAG00000001799	prpf3	99	72.996	Pygocentrus_nattereri
ENSSHAG00000009548	PRPF3	100	97.661	ENSRNOG00000025629	Prpf3	100	97.661	Rattus_norvegicus
ENSSHAG00000009548	PRPF3	82	97.794	ENSRBIG00000028854	PRPF3	98	97.794	Rhinopithecus_bieti
ENSSHAG00000009548	PRPF3	100	98.246	ENSRROG00000027464	PRPF3	100	98.246	Rhinopithecus_roxellana
ENSSHAG00000009548	PRPF3	100	91.374	ENSSBOG00000033104	PRPF3	100	91.374	Saimiri_boliviensis_boliviensis
ENSSHAG00000009548	PRPF3	100	73.277	ENSSFOG00015022014	prpf3	99	72.855	Scleropages_formosus
ENSSHAG00000009548	PRPF3	100	71.709	ENSSMAG00000015739	prpf3	99	71.429	Scophthalmus_maximus
ENSSHAG00000009548	PRPF3	100	68.768	ENSSDUG00000006840	prpf3	99	68.768	Seriola_dumerili
ENSSHAG00000009548	PRPF3	100	70.531	ENSSLDG00000015423	prpf3	99	70.810	Seriola_lalandi_dorsalis
ENSSHAG00000009548	PRPF3	100	98.099	ENSSARG00000011064	PRPF3	100	98.099	Sorex_araneus
ENSSHAG00000009548	PRPF3	100	91.799	ENSSPUG00000000809	PRPF3	100	91.799	Sphenodon_punctatus
ENSSHAG00000009548	PRPF3	100	71.045	ENSSPAG00000018721	prpf3	99	71.893	Stegastes_partitus
ENSSHAG00000009548	PRPF3	100	98.246	ENSSSCG00000030119	PRPF3	100	98.246	Sus_scrofa
ENSSHAG00000009548	PRPF3	100	80.758	ENSTGUG00000004552	PRPF3	100	80.758	Taeniopygia_guttata
ENSSHAG00000009548	PRPF3	100	71.902	ENSTRUG00000014923	prpf3	99	71.614	Takifugu_rubripes
ENSSHAG00000009548	PRPF3	100	71.955	ENSTNIG00000008058	prpf3	100	70.780	Tetraodon_nigroviridis
ENSSHAG00000009548	PRPF3	82	100.000	ENSTBEG00000014072	PRPF3	88	100.000	Tupaia_belangeri
ENSSHAG00000009548	PRPF3	100	92.105	ENSTTRG00000010616	PRPF3	100	92.105	Tursiops_truncatus
ENSSHAG00000009548	PRPF3	80	97.993	ENSUAMG00000009345	PRPF3	100	97.993	Ursus_americanus
ENSSHAG00000009548	PRPF3	100	98.246	ENSUMAG00000003720	PRPF3	100	98.246	Ursus_maritimus
ENSSHAG00000009548	PRPF3	89	99.408	ENSVPAG00000005425	PRPF3	89	99.408	Vicugna_pacos
ENSSHAG00000009548	PRPF3	100	98.246	ENSVVUG00000007933	PRPF3	100	98.246	Vulpes_vulpes
ENSSHAG00000009548	PRPF3	100	86.957	ENSXETG00000018654	prpf3	100	86.957	Xenopus_tropicalis
ENSSHAG00000009548	PRPF3	100	72.429	ENSXMAG00000016347	prpf3	99	71.813	Xiphophorus_maculatus