EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000009572 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 2987 bases
Position: chrGL841379.1:560033-563019
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000011120	EST1	PF10374.9	1.2e-10	1	1
ENSSHAP00000011120	EST1_DNA_bind	PF10373.9	1.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000011214	-	2697	-	ENSSHAP00000011120	898 (aa)	-	G3W6R5

Gene Model

Click here to download ENSSHAG00000009572's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000009572's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000009572	-	77	33.943	ENSSHAG00000000561	-	86	33.943
ENSSHAG00000009572	-	96	34.363	ENSSHAG00000014163	SMG5	99	34.562

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000009572	-	80	42.752	ENSG00000198952	SMG5	99	34.198	Homo_sapiens
ENSSHAG00000009572	-	81	42.271	ENSAPOG00000019690	smg5	80	42.271	Acanthochromis_polyacanthus
ENSSHAG00000009572	-	96	34.057	ENSAMEG00000014458	SMG5	99	34.531	Ailuropoda_melanoleuca
ENSSHAG00000009572	-	79	41.422	ENSACIG00000001353	smg5	76	41.176	Amphilophus_citrinellus
ENSSHAG00000009572	-	87	37.810	ENSAOCG00000019483	smg5	91	32.004	Amphiprion_ocellaris
ENSSHAG00000009572	-	87	37.810	ENSAPEG00000022949	smg5	97	31.725	Amphiprion_percula
ENSSHAG00000009572	-	87	37.838	ENSATEG00000005348	smg5	76	41.133	Anabas_testudineus
ENSSHAG00000009572	-	96	33.496	ENSAPLG00000010263	SMG5	74	45.989	Anas_platyrhynchos
ENSSHAG00000009572	-	99	32.529	ENSANAG00000032899	SMG5	99	33.269	Aotus_nancymaae
ENSSHAG00000009572	-	79	41.076	ENSACLG00000009311	smg5	99	32.079	Astatotilapia_calliptera
ENSSHAG00000009572	-	81	41.966	ENSAMXG00000024616	smg5	72	41.966	Astyanax_mexicanus
ENSSHAG00000009572	-	99	32.919	ENSBTAG00000009435	SMG5	99	34.402	Bos_taurus
ENSSHAG00000009572	-	98	33.841	ENSBTAG00000021747	-	98	33.841	Bos_taurus
ENSSHAG00000009572	-	99	32.336	ENSCJAG00000005684	SMG5	99	33.751	Callithrix_jacchus
ENSSHAG00000009572	-	99	32.008	ENSCAFG00000016839	SMG5	99	33.689	Canis_familiaris
ENSSHAG00000009572	-	99	32.008	ENSCAFG00020006061	SMG5	99	33.689	Canis_lupus_dingo
ENSSHAG00000009572	-	99	32.540	ENSCHIG00000007709	SMG5	99	34.115	Capra_hircus
ENSSHAG00000009572	-	98	32.927	ENSCHIG00000006323	-	77	45.802	Capra_hircus
ENSSHAG00000009572	-	80	42.998	ENSTSYG00000004099	SMG5	78	42.998	Carlito_syrichta
ENSSHAG00000009572	-	78	43.655	ENSCPOG00000015696	SMG5	99	34.387	Cavia_porcellus
ENSSHAG00000009572	-	99	32.752	ENSCCAG00000027409	SMG5	99	33.979	Cebus_capucinus
ENSSHAG00000009572	-	80	42.998	ENSCATG00000030539	SMG5	99	34.294	Cercocebus_atys
ENSSHAG00000009572	-	80	42.506	ENSCLAG00000003983	SMG5	99	33.558	Chinchilla_lanigera
ENSSHAG00000009572	-	80	42.998	ENSCSAG00000002120	SMG5	99	34.198	Chlorocebus_sabaeus
ENSSHAG00000009572	-	75	46.018	ENSCPBG00000025848	SMG5	100	32.895	Chrysemys_picta_bellii
ENSSHAG00000009572	-	80	42.752	ENSCANG00000029208	SMG5	99	33.860	Colobus_angolensis_palliatus
ENSSHAG00000009572	-	78	42.893	ENSCGRG00001006336	Smg5	99	33.333	Cricetulus_griseus_chok1gshd
ENSSHAG00000009572	-	76	44.118	ENSCGRG00000005111	Smg5	99	33.598	Cricetulus_griseus_crigri
ENSSHAG00000009572	-	78	42.211	ENSCSEG00000014220	smg5	76	42.211	Cynoglossus_semilaevis
ENSSHAG00000009572	-	79	42.680	ENSDARG00000041481	smg5	75	40.421	Danio_rerio
ENSSHAG00000009572	-	76	40.642	ENSDNOG00000000051	SMG5	99	32.625	Dasypus_novemcinctus
ENSSHAG00000009572	-	80	42.260	ENSDORG00000010382	Smg5	99	33.685	Dipodomys_ordii
ENSSHAG00000009572	-	80	42.752	ENSEASG00005019122	SMG5	99	33.816	Equus_asinus_asinus
ENSSHAG00000009572	-	80	42.752	ENSECAG00000001389	SMG5	99	33.913	Equus_caballus
ENSSHAG00000009572	-	72	43.695	ENSEEUG00000012690	SMG5	73	43.695	Erinaceus_europaeus
ENSSHAG00000009572	-	79	41.133	ENSELUG00000012585	smg5	99	31.707	Esox_lucius
ENSSHAG00000009572	-	99	33.333	ENSFCAG00000011783	SMG5	99	33.754	Felis_catus
ENSSHAG00000009572	-	76	43.850	ENSFDAG00000017388	SMG5	99	33.400	Fukomys_damarensis
ENSSHAG00000009572	-	68	42.162	ENSFHEG00000013939	smg5	73	42.897	Fundulus_heteroclitus
ENSSHAG00000009572	-	82	39.189	ENSGMOG00000007310	smg5	74	39.640	Gadus_morhua
ENSSHAG00000009572	-	81	44.416	ENSGALG00000029918	-	74	45.722	Gallus_gallus
ENSSHAG00000009572	-	72	40.758	ENSGAFG00000021691	smg5	69	41.404	Gambusia_affinis
ENSSHAG00000009572	-	79	40.436	ENSGACG00000013142	smg5	71	40.194	Gasterosteus_aculeatus
ENSSHAG00000009572	-	81	43.909	ENSGAGG00000016131	SMG5	75	43.909	Gopherus_agassizii
ENSSHAG00000009572	-	80	42.752	ENSGGOG00000010932	SMG5	99	34.102	Gorilla_gorilla
ENSSHAG00000009572	-	79	41.076	ENSHBUG00000008654	smg5	84	38.525	Haplochromis_burtoni
ENSSHAG00000009572	-	78	43.655	ENSHGLG00000019152	SMG5	99	33.430	Heterocephalus_glaber_female
ENSSHAG00000009572	-	67	43.655	ENSHGLG00100015948	SMG5	99	34.202	Heterocephalus_glaber_male
ENSSHAG00000009572	-	69	43.681	ENSHCOG00000010229	smg5	78	41.519	Hippocampus_comes
ENSSHAG00000009572	-	79	41.935	ENSIPUG00000006624	Smg5	71	41.935	Ictalurus_punctatus
ENSSHAG00000009572	-	99	33.301	ENSSTOG00000001780	SMG5	99	34.106	Ictidomys_tridecemlineatus
ENSSHAG00000009572	-	99	33.526	ENSJJAG00000022763	Smg5	99	33.525	Jaculus_jaculus
ENSSHAG00000009572	-	80	41.076	ENSKMAG00000014586	smg5	70	41.076	Kryptolebias_marmoratus
ENSSHAG00000009572	-	79	41.176	ENSLBEG00000002145	smg5	99	32.115	Labrus_bergylta
ENSSHAG00000009572	-	83	39.140	ENSLACG00000010521	SMG5	80	38.479	Latimeria_chalumnae
ENSSHAG00000009572	-	78	41.772	ENSLOCG00000008380	smg5	77	38.025	Lepisosteus_oculatus
ENSSHAG00000009572	-	78	43.401	ENSLAFG00000006241	SMG5	99	33.690	Loxodonta_africana
ENSSHAG00000009572	-	80	42.998	ENSMFAG00000045357	SMG5	99	34.294	Macaca_fascicularis
ENSSHAG00000009572	-	80	42.998	ENSMMUG00000000090	SMG5	99	34.694	Macaca_mulatta
ENSSHAG00000009572	-	80	42.998	ENSMNEG00000044425	SMG5	99	34.390	Macaca_nemestrina
ENSSHAG00000009572	-	80	37.685	ENSMLEG00000041192	SMG5	99	30.962	Mandrillus_leucophaeus
ENSSHAG00000009572	-	87	38.095	ENSMAMG00000010683	smg5	77	38.095	Mastacembelus_armatus
ENSSHAG00000009572	-	81	41.076	ENSMZEG00005015815	smg5	99	30.874	Maylandia_zebra
ENSSHAG00000009572	-	79	42.356	ENSMAUG00000010381	Smg5	99	32.787	Mesocricetus_auratus
ENSSHAG00000009572	-	80	42.752	ENSMICG00000002257	SMG5	99	33.915	Microcebus_murinus
ENSSHAG00000009572	-	79	43.108	ENSMOCG00000016590	Smg5	99	33.104	Microtus_ochrogaster
ENSSHAG00000009572	-	81	38.971	ENSMMOG00000017199	smg5	78	36.743	Mola_mola
ENSSHAG00000009572	-	65	43.909	ENSMODG00000016901	SMG5	95	34.822	Monodelphis_domestica
ENSSHAG00000009572	-	85	33.871	ENSMODG00000004532	-	82	32.199	Monodelphis_domestica
ENSSHAG00000009572	-	86	36.596	ENSMALG00000010375	smg5	75	36.596	Monopterus_albus
ENSSHAG00000009572	-	80	41.278	MGP_CAROLIEiJ_G0025163	Smg5	99	44.068	Mus_caroli
ENSSHAG00000009572	-	80	41.278	ENSMUSG00000001415	Smg5	98	44.068	Mus_musculus
ENSSHAG00000009572	-	79	42.356	MGP_PahariEiJ_G0026606	Smg5	99	44.633	Mus_pahari
ENSSHAG00000009572	-	80	41.278	MGP_SPRETEiJ_G0026104	Smg5	99	44.068	Mus_spretus
ENSSHAG00000009572	-	72	44.838	ENSMPUG00000004546	SMG5	100	34.062	Mustela_putorius_furo
ENSSHAG00000009572	-	80	42.506	ENSMLUG00000008518	SMG5	99	33.558	Myotis_lucifugus
ENSSHAG00000009572	-	79	43.358	ENSNGAG00000020706	Smg5	99	33.173	Nannospalax_galili
ENSSHAG00000009572	-	76	41.646	ENSNBRG00000004332	smg5	97	31.485	Neolamprologus_brichardi
ENSSHAG00000009572	-	99	33.496	ENSNLEG00000012439	SMG5	99	33.877	Nomascus_leucogenys
ENSSHAG00000009572	-	78	44.162	ENSMEUG00000012834	SMG5	99	33.759	Notamacropus_eugenii
ENSSHAG00000009572	-	80	42.752	ENSOPRG00000009152	SMG5	99	33.268	Ochotona_princeps
ENSSHAG00000009572	-	80	42.752	ENSODEG00000012237	SMG5	78	42.752	Octodon_degus
ENSSHAG00000009572	-	87	38.636	ENSONIG00000008632	smg5	76	38.843	Oreochromis_niloticus
ENSSHAG00000009572	-	69	36.973	ENSOCUG00000023338	-	76	36.973	Oryctolagus_cuniculus
ENSSHAG00000009572	-	76	44.652	ENSOCUG00000012886	SMG5	99	34.132	Oryctolagus_cuniculus
ENSSHAG00000009572	-	79	40.976	ENSORLG00000016239	smg5	73	40.976	Oryzias_latipes
ENSSHAG00000009572	-	98	30.660	ENSORLG00020013127	smg5	99	31.062	Oryzias_latipes_hni
ENSSHAG00000009572	-	80	41.007	ENSORLG00015019014	smg5	99	30.869	Oryzias_latipes_hsok
ENSSHAG00000009572	-	61	41.278	ENSOMEG00000021330	smg5	63	39.259	Oryzias_melastigma
ENSSHAG00000009572	-	98	32.094	ENSOGAG00000004966	SMG5	99	33.692	Otolemur_garnettii
ENSSHAG00000009572	-	99	32.540	ENSOARG00000005778	SMG5	99	34.106	Ovis_aries
ENSSHAG00000009572	-	98	32.995	ENSOARG00000011963	-	99	32.995	Ovis_aries
ENSSHAG00000009572	-	80	42.998	ENSPPAG00000011996	SMG5	99	34.294	Pan_paniscus
ENSSHAG00000009572	-	96	32.565	ENSPPRG00000011901	SMG5	99	34.203	Panthera_pardus
ENSSHAG00000009572	-	93	31.847	ENSPTIG00000007892	SMG5	96	33.088	Panthera_tigris_altaica
ENSSHAG00000009572	-	80	42.998	ENSPTRG00000023925	SMG5	99	34.294	Pan_troglodytes
ENSSHAG00000009572	-	80	42.998	ENSPTRG00000049282	-	99	34.294	Pan_troglodytes
ENSSHAG00000009572	-	80	42.998	ENSPANG00000011201	SMG5	99	34.294	Papio_anubis
ENSSHAG00000009572	-	79	40.943	ENSPKIG00000009402	smg5	77	40.199	Paramormyrops_kingsleyae
ENSSHAG00000009572	-	96	34.565	ENSPSIG00000015198	SMG5	99	34.661	Pelodiscus_sinensis
ENSSHAG00000009572	-	78	41.071	ENSPMGG00000010465	smg5	71	41.071	Periophthalmus_magnuspinnatus
ENSSHAG00000009572	-	78	43.147	ENSPEMG00000001819	Smg5	99	32.757	Peromyscus_maniculatus_bairdii
ENSSHAG00000009572	-	79	39.119	ENSPMAG00000000410	smg5	77	38.860	Petromyzon_marinus
ENSSHAG00000009572	-	79	43.860	ENSPCIG00000018938	SMG5	99	34.146	Phascolarctos_cinereus
ENSSHAG00000009572	-	80	40.831	ENSPFOG00000010191	smg5	71	41.076	Poecilia_formosa
ENSSHAG00000009572	-	80	40.831	ENSPLAG00000009332	smg5	71	41.076	Poecilia_latipinna
ENSSHAG00000009572	-	80	41.032	ENSPMEG00000014105	smg5	84	37.888	Poecilia_mexicana
ENSSHAG00000009572	-	80	40.831	ENSPREG00000017713	smg5	71	41.076	Poecilia_reticulata
ENSSHAG00000009572	-	80	42.752	ENSPPYG00000000723	SMG5	99	34.198	Pongo_abelii
ENSSHAG00000009572	-	99	32.271	ENSPCOG00000004741	SMG5	99	34.139	Propithecus_coquereli
ENSSHAG00000009572	-	73	46.245	ENSPVAG00000016748	SMG5	71	46.245	Pteropus_vampyrus
ENSSHAG00000009572	-	79	41.076	ENSPNYG00000013397	smg5	76	38.636	Pundamilia_nyererei
ENSSHAG00000009572	-	81	41.446	ENSPNAG00000028363	smg5	72	41.446	Pygocentrus_nattereri
ENSSHAG00000009572	-	79	42.607	ENSRNOG00000019590	Smg5	99	33.172	Rattus_norvegicus
ENSSHAG00000009572	-	80	42.752	ENSRBIG00000027428	SMG5	99	34.102	Rhinopithecus_bieti
ENSSHAG00000009572	-	80	42.752	ENSRROG00000030035	SMG5	99	34.198	Rhinopithecus_roxellana
ENSSHAG00000009572	-	99	32.336	ENSSBOG00000033339	SMG5	99	33.751	Saimiri_boliviensis_boliviensis
ENSSHAG00000009572	-	82	41.452	ENSSFOG00015024175	smg5	79	41.549	Scleropages_formosus
ENSSHAG00000009572	-	79	40.831	ENSSMAG00000013059	smg5	70	40.831	Scophthalmus_maximus
ENSSHAG00000009572	-	79	40.194	ENSSDUG00000007122	smg5	70	40.194	Seriola_dumerili
ENSSHAG00000009572	-	79	40.587	ENSSLDG00000011418	smg5	70	40.587	Seriola_lalandi_dorsalis
ENSSHAG00000009572	-	69	34.420	ENSSARG00000012484	SMG5	74	34.420	Sorex_araneus
ENSSHAG00000009572	-	73	46.018	ENSSPUG00000002260	SMG5	74	46.018	Sphenodon_punctatus
ENSSHAG00000009572	-	80	41.019	ENSSPAG00000014266	smg5	96	32.118	Stegastes_partitus
ENSSHAG00000009572	-	80	42.752	ENSSSCG00000006490	-	100	34.436	Sus_scrofa
ENSSHAG00000009572	-	98	34.314	ENSTGUG00000003748	-	99	33.977	Taeniopygia_guttata
ENSSHAG00000009572	-	79	42.602	ENSTRUG00000012580	smg5	79	40.878	Takifugu_rubripes
ENSSHAG00000009572	-	82	39.480	ENSTNIG00000010303	smg5	76	41.379	Tetraodon_nigroviridis
ENSSHAG00000009572	-	59	42.786	ENSTBEG00000002777	SMG5	57	42.786	Tupaia_belangeri
ENSSHAG00000009572	-	93	33.951	ENSTTRG00000001401	SMG5	94	34.339	Tursiops_truncatus
ENSSHAG00000009572	-	99	33.558	ENSUAMG00000013721	SMG5	99	34.111	Ursus_americanus
ENSSHAG00000009572	-	96	33.231	ENSUMAG00000018041	SMG5	98	33.436	Ursus_maritimus
ENSSHAG00000009572	-	58	46.847	ENSVPAG00000009446	SMG5	80	36.136	Vicugna_pacos
ENSSHAG00000009572	-	99	33.236	ENSVVUG00000005887	SMG5	99	33.689	Vulpes_vulpes
ENSSHAG00000009572	-	58	40.521	ENSXCOG00000004379	smg5	68	40.758	Xiphophorus_couchianus
ENSSHAG00000009572	-	83	39.492	ENSXMAG00000013499	smg5	99	31.311	Xiphophorus_maculatus