EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000009669 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 1014 bases
Position: chrGL861690.1:572971-573984
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000011238	PRP4	PF08799.11	2.5e-11	1	1
ENSSHAP00000011238	Prp18	PF02840.15	5.7e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000011333	-	1014	-	ENSSHAP00000011238	337 (aa)	-	G3W733

Gene Model

Click here to download ENSSHAG00000009669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000009669's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000009669	-	100	78.947	ENSSHAG00000016463	-	100	78.947

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000009669	-	100	77.485	ENSG00000165630	PRPF18	100	77.485	Homo_sapiens
ENSSHAG00000009669	-	100	71.345	ENSAPOG00000024177	prpf18	100	71.345	Acanthochromis_polyacanthus
ENSSHAG00000009669	-	100	77.193	ENSAMEG00000013591	-	100	77.193	Ailuropoda_melanoleuca
ENSSHAG00000009669	-	100	70.468	ENSACIG00000001186	prpf18	100	70.468	Amphilophus_citrinellus
ENSSHAG00000009669	-	98	70.746	ENSAOCG00000006572	prpf18	94	69.096	Amphiprion_ocellaris
ENSSHAG00000009669	-	100	71.345	ENSAPEG00000004564	prpf18	100	71.345	Amphiprion_percula
ENSSHAG00000009669	-	100	71.053	ENSATEG00000000303	prpf18	100	71.053	Anabas_testudineus
ENSSHAG00000009669	-	99	76.696	ENSAPLG00000003387	-	99	76.696	Anas_platyrhynchos
ENSSHAG00000009669	-	100	74.709	ENSACAG00000000818	-	100	74.709	Anolis_carolinensis
ENSSHAG00000009669	-	100	77.485	ENSANAG00000037445	-	100	77.485	Aotus_nancymaae
ENSSHAG00000009669	-	100	70.175	ENSACLG00000026296	prpf18	100	70.175	Astatotilapia_calliptera
ENSSHAG00000009669	-	100	70.000	ENSAMXG00000012848	prpf18	100	70.000	Astyanax_mexicanus
ENSSHAG00000009669	-	100	76.901	ENSBTAG00000017244	PRPF18	100	76.901	Bos_taurus
ENSSHAG00000009669	-	98	35.447	WBGene00009320	F32B6.3	97	35.447	Caenorhabditis_elegans
ENSSHAG00000009669	-	100	77.485	ENSCJAG00000009432	-	100	77.485	Callithrix_jacchus
ENSSHAG00000009669	-	100	77.193	ENSCAFG00000004735	-	100	77.193	Canis_familiaris
ENSSHAG00000009669	-	100	77.193	ENSCAFG00020007712	-	100	77.193	Canis_lupus_dingo
ENSSHAG00000009669	-	100	76.901	ENSCHIG00000000499	-	100	76.901	Capra_hircus
ENSSHAG00000009669	-	100	76.901	ENSTSYG00000003517	-	100	76.901	Carlito_syrichta
ENSSHAG00000009669	-	100	77.485	ENSCPOG00000021069	-	100	77.485	Cavia_porcellus
ENSSHAG00000009669	-	100	77.485	ENSCCAG00000036822	-	100	77.485	Cebus_capucinus
ENSSHAG00000009669	-	100	68.129	ENSCATG00000016633	-	100	68.129	Cercocebus_atys
ENSSHAG00000009669	-	100	76.901	ENSCLAG00000011770	-	100	76.901	Chinchilla_lanigera
ENSSHAG00000009669	-	100	75.499	ENSCSAG00000013109	-	100	75.499	Chlorocebus_sabaeus
ENSSHAG00000009669	-	100	73.034	ENSCPBG00000003100	-	100	73.034	Chrysemys_picta_bellii
ENSSHAG00000009669	-	99	52.199	ENSCING00000020481	-	97	52.199	Ciona_intestinalis
ENSSHAG00000009669	-	99	52.212	ENSCSAVG00000010546	-	98	52.507	Ciona_savignyi
ENSSHAG00000009669	-	100	77.193	ENSCANG00000034900	-	100	77.193	Colobus_angolensis_palliatus
ENSSHAG00000009669	-	100	77.193	ENSCGRG00001023665	Prpf18	100	77.193	Cricetulus_griseus_chok1gshd
ENSSHAG00000009669	-	100	77.193	ENSCGRG00000014690	Prpf18	100	77.193	Cricetulus_griseus_crigri
ENSSHAG00000009669	-	100	69.298	ENSCSEG00000005536	prpf18	99	69.298	Cynoglossus_semilaevis
ENSSHAG00000009669	-	100	69.883	ENSCVAG00000012401	prpf18	100	69.883	Cyprinodon_variegatus
ENSSHAG00000009669	-	100	71.637	ENSDARG00000058306	prpf18	100	71.637	Danio_rerio
ENSSHAG00000009669	-	100	77.485	ENSDNOG00000035607	-	100	77.485	Dasypus_novemcinctus
ENSSHAG00000009669	-	100	76.901	ENSDORG00000000858	Prpf18	100	76.901	Dipodomys_ordii
ENSSHAG00000009669	-	99	46.921	FBgn0027784	Prp18	98	46.921	Drosophila_melanogaster
ENSSHAG00000009669	-	100	69.298	ENSETEG00000015060	-	100	69.298	Echinops_telfairi
ENSSHAG00000009669	-	100	58.074	ENSEBUG00000016502	prpf18	99	58.074	Eptatretus_burgeri
ENSSHAG00000009669	-	100	77.193	ENSEASG00005019373	-	100	77.193	Equus_asinus_asinus
ENSSHAG00000009669	-	100	77.193	ENSECAG00000006997	PRPF18	100	77.193	Equus_caballus
ENSSHAG00000009669	-	92	47.152	ENSEEUG00000001171	-	100	47.152	Erinaceus_europaeus
ENSSHAG00000009669	-	100	69.388	ENSELUG00000022190	prpf18	100	69.388	Esox_lucius
ENSSHAG00000009669	-	100	76.901	ENSFCAG00000004436	-	100	76.901	Felis_catus
ENSSHAG00000009669	-	92	71.385	ENSFALG00000001912	-	97	73.231	Ficedula_albicollis
ENSSHAG00000009669	-	93	78.056	ENSFDAG00000014026	-	99	78.056	Fukomys_damarensis
ENSSHAG00000009669	-	99	51.471	ENSFDAG00000010713	-	97	51.471	Fukomys_damarensis
ENSSHAG00000009669	-	79	74.632	ENSFHEG00000020125	prpf18	99	74.632	Fundulus_heteroclitus
ENSSHAG00000009669	-	99	68.328	ENSGMOG00000012210	prpf18	99	68.328	Gadus_morhua
ENSSHAG00000009669	-	100	76.901	ENSGALG00000043593	-	100	76.901	Gallus_gallus
ENSSHAG00000009669	-	100	69.883	ENSGAFG00000006034	prpf18	100	69.883	Gambusia_affinis
ENSSHAG00000009669	-	100	69.883	ENSGACG00000012232	prpf18	100	69.883	Gasterosteus_aculeatus
ENSSHAG00000009669	-	100	76.023	ENSGAGG00000016878	-	100	76.023	Gopherus_agassizii
ENSSHAG00000009669	-	92	76.899	ENSGGOG00000025188	-	96	76.899	Gorilla_gorilla
ENSSHAG00000009669	-	100	70.175	ENSHBUG00000010264	prpf18	100	70.175	Haplochromis_burtoni
ENSSHAG00000009669	-	100	77.193	ENSHGLG00000018534	PRPF18	100	77.193	Heterocephalus_glaber_female
ENSSHAG00000009669	-	95	76.687	ENSHGLG00100012161	-	99	76.687	Heterocephalus_glaber_male
ENSSHAG00000009669	-	100	70.175	ENSHCOG00000015987	prpf18	100	70.175	Hippocampus_comes
ENSSHAG00000009669	-	100	67.705	ENSIPUG00000007432	prpf18	100	68.555	Ictalurus_punctatus
ENSSHAG00000009669	-	100	76.316	ENSSTOG00000008735	-	100	76.316	Ictidomys_tridecemlineatus
ENSSHAG00000009669	-	100	77.485	ENSJJAG00000024041	-	100	77.485	Jaculus_jaculus
ENSSHAG00000009669	-	100	57.434	ENSJJAG00000015191	-	100	57.434	Jaculus_jaculus
ENSSHAG00000009669	-	100	69.591	ENSKMAG00000012124	prpf18	100	69.591	Kryptolebias_marmoratus
ENSSHAG00000009669	-	100	67.836	ENSLBEG00000028466	prpf18	100	67.836	Labrus_bergylta
ENSSHAG00000009669	-	100	71.345	ENSLACG00000009885	prpf18	100	71.345	Latimeria_chalumnae
ENSSHAG00000009669	-	100	73.684	ENSLOCG00000016736	prpf18	100	73.684	Lepisosteus_oculatus
ENSSHAG00000009669	-	100	77.485	ENSLAFG00000007753	-	100	77.485	Loxodonta_africana
ENSSHAG00000009669	-	100	77.485	ENSMFAG00000000540	-	100	77.485	Macaca_fascicularis
ENSSHAG00000009669	-	100	77.485	ENSMMUG00000015071	PRPF18	98	82.609	Macaca_mulatta
ENSSHAG00000009669	-	100	77.485	ENSMNEG00000024679	-	100	77.485	Macaca_nemestrina
ENSSHAG00000009669	-	100	62.865	ENSMLEG00000031715	-	100	62.865	Mandrillus_leucophaeus
ENSSHAG00000009669	-	100	70.468	ENSMAMG00000006610	prpf18	100	70.468	Mastacembelus_armatus
ENSSHAG00000009669	-	100	70.175	ENSMZEG00005019392	prpf18	100	70.175	Maylandia_zebra
ENSSHAG00000009669	-	100	76.901	ENSMGAG00000005023	-	100	76.901	Meleagris_gallopavo
ENSSHAG00000009669	-	100	77.193	ENSMICG00000006572	-	100	77.193	Microcebus_murinus
ENSSHAG00000009669	-	100	77.485	ENSMOCG00000021468	Prpf18	100	77.485	Microtus_ochrogaster
ENSSHAG00000009669	-	100	69.591	ENSMMOG00000013012	prpf18	100	69.591	Mola_mola
ENSSHAG00000009669	-	92	76.308	ENSMODG00000016902	-	91	76.308	Monodelphis_domestica
ENSSHAG00000009669	-	100	72.515	ENSMODG00000024043	-	100	72.515	Monodelphis_domestica
ENSSHAG00000009669	-	100	64.723	ENSMALG00000005486	prpf18	100	65.015	Monopterus_albus
ENSSHAG00000009669	-	100	77.193	MGP_CAROLIEiJ_G0023143	Prpf18	100	77.193	Mus_caroli
ENSSHAG00000009669	-	100	77.485	ENSMUSG00000039449	Prpf18	100	77.485	Mus_musculus
ENSSHAG00000009669	-	100	77.193	MGP_PahariEiJ_G0019203	Prpf18	100	77.193	Mus_pahari
ENSSHAG00000009669	-	100	77.193	MGP_SPRETEiJ_G0024061	Prpf18	100	77.193	Mus_spretus
ENSSHAG00000009669	-	100	76.901	ENSMPUG00000000938	-	100	76.901	Mustela_putorius_furo
ENSSHAG00000009669	-	100	76.901	ENSMLUG00000009200	-	100	76.901	Myotis_lucifugus
ENSSHAG00000009669	-	67	76.087	ENSNGAG00000023550	-	82	76.087	Nannospalax_galili
ENSSHAG00000009669	-	100	76.901	ENSNGAG00000012500	-	100	76.901	Nannospalax_galili
ENSSHAG00000009669	-	100	70.175	ENSNBRG00000001778	prpf18	100	70.175	Neolamprologus_brichardi
ENSSHAG00000009669	-	100	77.485	ENSNLEG00000012186	-	100	77.485	Nomascus_leucogenys
ENSSHAG00000009669	-	100	58.772	ENSMEUG00000005032	-	100	58.772	Notamacropus_eugenii
ENSSHAG00000009669	-	77	57.736	ENSOPRG00000002153	-	100	57.736	Ochotona_princeps
ENSSHAG00000009669	-	100	77.193	ENSODEG00000003770	-	100	77.193	Octodon_degus
ENSSHAG00000009669	-	98	70.746	ENSONIG00000014854	prpf18	96	70.746	Oreochromis_niloticus
ENSSHAG00000009669	-	100	76.901	ENSOANG00000015404	-	100	76.901	Ornithorhynchus_anatinus
ENSSHAG00000009669	-	100	77.485	ENSOCUG00000027756	-	96	77.370	Oryctolagus_cuniculus
ENSSHAG00000009669	-	100	67.429	ENSORLG00000010293	prpf18	100	67.429	Oryzias_latipes
ENSSHAG00000009669	-	100	69.591	ENSORLG00020001530	prpf18	100	69.591	Oryzias_latipes_hni
ENSSHAG00000009669	-	100	69.591	ENSORLG00015013705	prpf18	100	69.591	Oryzias_latipes_hsok
ENSSHAG00000009669	-	100	70.760	ENSOMEG00000009167	prpf18	100	70.760	Oryzias_melastigma
ENSSHAG00000009669	-	100	76.901	ENSOGAG00000007294	-	100	76.901	Otolemur_garnettii
ENSSHAG00000009669	-	100	74.929	ENSOARG00000006243	-	100	74.929	Ovis_aries
ENSSHAG00000009669	-	100	77.485	ENSPPAG00000041959	-	100	77.485	Pan_paniscus
ENSSHAG00000009669	-	100	76.901	ENSPPRG00000000107	-	100	76.901	Panthera_pardus
ENSSHAG00000009669	-	100	76.901	ENSPTIG00000021094	-	100	76.901	Panthera_tigris_altaica
ENSSHAG00000009669	-	100	77.485	ENSPTRG00000002306	PRPF18	100	77.485	Pan_troglodytes
ENSSHAG00000009669	-	100	77.193	ENSPANG00000023346	-	100	77.193	Papio_anubis
ENSSHAG00000009669	-	86	94.340	ENSPKIG00000014128	prpf18	96	69.231	Paramormyrops_kingsleyae
ENSSHAG00000009669	-	100	75.731	ENSPSIG00000016064	-	100	75.731	Pelodiscus_sinensis
ENSSHAG00000009669	-	100	64.912	ENSPMGG00000016486	prpf18	100	64.912	Periophthalmus_magnuspinnatus
ENSSHAG00000009669	-	100	77.485	ENSPEMG00000013704	Prpf18	100	77.485	Peromyscus_maniculatus_bairdii
ENSSHAG00000009669	-	100	63.663	ENSPMAG00000000204	prpf18	100	63.663	Petromyzon_marinus
ENSSHAG00000009669	-	92	78.165	ENSPCIG00000012963	-	99	78.165	Phascolarctos_cinereus
ENSSHAG00000009669	-	100	68.000	ENSPFOG00000017611	prpf18	100	68.000	Poecilia_formosa
ENSSHAG00000009669	-	100	69.298	ENSPLAG00000000369	prpf18	100	69.298	Poecilia_latipinna
ENSSHAG00000009669	-	100	69.298	ENSPMEG00000005183	prpf18	100	69.298	Poecilia_mexicana
ENSSHAG00000009669	-	100	69.591	ENSPREG00000015232	prpf18	100	69.591	Poecilia_reticulata
ENSSHAG00000009669	-	100	77.193	ENSPPYG00000002101	PRPF18	100	77.193	Pongo_abelii
ENSSHAG00000009669	-	100	60.526	ENSPCAG00000010833	-	100	60.526	Procavia_capensis
ENSSHAG00000009669	-	100	72.222	ENSPCOG00000013057	-	100	72.222	Propithecus_coquereli
ENSSHAG00000009669	-	100	46.199	ENSPVAG00000002947	-	100	46.199	Pteropus_vampyrus
ENSSHAG00000009669	-	100	70.175	ENSPNYG00000003554	prpf18	100	70.175	Pundamilia_nyererei
ENSSHAG00000009669	-	100	70.940	ENSPNAG00000023151	prpf18	100	70.940	Pygocentrus_nattereri
ENSSHAG00000009669	-	100	76.901	ENSRNOG00000018396	Prpf18	100	76.901	Rattus_norvegicus
ENSSHAG00000009669	-	100	76.901	ENSRBIG00000028028	-	100	76.901	Rhinopithecus_bieti
ENSSHAG00000009669	-	100	77.193	ENSRROG00000040695	-	100	77.193	Rhinopithecus_roxellana
ENSSHAG00000009669	-	100	77.485	ENSSBOG00000034482	-	100	77.485	Saimiri_boliviensis_boliviensis
ENSSHAG00000009669	-	98	67.536	ENSSFOG00015022118	prpf18	100	63.401	Scleropages_formosus
ENSSHAG00000009669	-	69	44.444	ENSSFOG00015021154	-	91	44.444	Scleropages_formosus
ENSSHAG00000009669	-	100	69.883	ENSSMAG00000005308	prpf18	100	69.883	Scophthalmus_maximus
ENSSHAG00000009669	-	100	71.053	ENSSDUG00000015428	prpf18	100	71.053	Seriola_dumerili
ENSSHAG00000009669	-	100	71.053	ENSSLDG00000023989	prpf18	100	71.053	Seriola_lalandi_dorsalis
ENSSHAG00000009669	-	100	52.924	ENSSARG00000005307	-	100	52.924	Sorex_araneus
ENSSHAG00000009669	-	100	74.854	ENSSPUG00000002619	-	100	74.854	Sphenodon_punctatus
ENSSHAG00000009669	-	100	71.345	ENSSPAG00000019502	prpf18	100	71.345	Stegastes_partitus
ENSSHAG00000009669	-	100	77.193	ENSSSCG00000026354	-	100	77.193	Sus_scrofa
ENSSHAG00000009669	-	100	76.023	ENSTGUG00000002286	-	100	76.023	Taeniopygia_guttata
ENSSHAG00000009669	-	100	68.129	ENSTRUG00000011278	prpf18	100	68.129	Takifugu_rubripes
ENSSHAG00000009669	-	100	68.713	ENSTNIG00000000911	prpf18	100	68.713	Tetraodon_nigroviridis
ENSSHAG00000009669	-	79	92.308	ENSTBEG00000013011	-	79	92.308	Tupaia_belangeri
ENSSHAG00000009669	-	100	77.778	ENSTTRG00000011117	PRPF18	100	77.778	Tursiops_truncatus
ENSSHAG00000009669	-	91	78.135	ENSUAMG00000001815	-	93	78.135	Ursus_americanus
ENSSHAG00000009669	-	100	73.099	ENSUMAG00000012329	-	100	73.099	Ursus_maritimus
ENSSHAG00000009669	-	100	71.930	ENSVPAG00000011486	-	100	71.930	Vicugna_pacos
ENSSHAG00000009669	-	100	77.193	ENSVVUG00000005453	-	100	77.193	Vulpes_vulpes
ENSSHAG00000009669	-	100	68.406	ENSXETG00000024057	prpf18	100	68.406	Xenopus_tropicalis
ENSSHAG00000009669	-	100	68.895	ENSXCOG00000020414	prpf18	100	68.895	Xiphophorus_couchianus
ENSSHAG00000009669	-	100	69.591	ENSXMAG00000004713	prpf18	91	69.591	Xiphophorus_maculatus