EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000009692 (Gene tree)
Gene ID: 100915787
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 72139 bases
Position: chrGL861591.1:575913-648051
Accession: 29190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000011263	Ago_hook	PF10427.9	5.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000011358	TNRC6B-201	5472	-	ENSSHAP00000011263	1823 (aa)	-	G3W758

Gene Model

Click here to download ENSSHAG00000009692's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000009692's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000009692	TNRC6B	70	38.489	ENSSHAG00000008811	TNRC6A	98	35.548

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000009692	TNRC6B	99	87.869	ENSG00000100354	TNRC6B	99	87.760	Homo_sapiens
ENSSHAG00000009692	TNRC6B	99	88.033	ENSAMEG00000011025	TNRC6B	99	87.923	Ailuropoda_melanoleuca
ENSSHAG00000009692	TNRC6B	98	77.925	ENSAPLG00000009347	TNRC6B	99	78.587	Anas_platyrhynchos
ENSSHAG00000009692	TNRC6B	92	73.387	ENSACAG00000007281	TNRC6B	92	74.468	Anolis_carolinensis
ENSSHAG00000009692	TNRC6B	99	87.923	ENSANAG00000035042	TNRC6B	99	87.814	Aotus_nancymaae
ENSSHAG00000009692	TNRC6B	65	46.914	ENSAMXG00000008707	tnrc6b	84	43.361	Astyanax_mexicanus
ENSSHAG00000009692	TNRC6B	100	87.093	ENSBTAG00000021076	TNRC6B	99	87.023	Bos_taurus
ENSSHAG00000009692	TNRC6B	99	87.548	ENSCJAG00000002732	TNRC6B	99	92.135	Callithrix_jacchus
ENSSHAG00000009692	TNRC6B	99	87.745	ENSCAFG00000001255	TNRC6B	99	87.418	Canis_familiaris
ENSSHAG00000009692	TNRC6B	99	81.325	ENSCAFG00020002189	TNRC6B	98	81.897	Canis_lupus_dingo
ENSSHAG00000009692	TNRC6B	99	80.945	ENSCHIG00000003491	TNRC6B	99	81.952	Capra_hircus
ENSSHAG00000009692	TNRC6B	99	87.596	ENSTSYG00000011836	TNRC6B	99	87.486	Carlito_syrichta
ENSSHAG00000009692	TNRC6B	99	81.399	ENSCPOG00000005705	TNRC6B	99	82.190	Cavia_porcellus
ENSSHAG00000009692	TNRC6B	99	86.667	ENSCCAG00000019912	TNRC6B	99	86.612	Cebus_capucinus
ENSSHAG00000009692	TNRC6B	99	87.220	ENSCATG00000029291	TNRC6B	99	87.111	Cercocebus_atys
ENSSHAG00000009692	TNRC6B	99	81.542	ENSCLAG00000016942	TNRC6B	97	82.388	Chinchilla_lanigera
ENSSHAG00000009692	TNRC6B	99	78.844	ENSCSAG00000006021	TNRC6B	99	78.919	Chlorocebus_sabaeus
ENSSHAG00000009692	TNRC6B	92	83.555	ENSCPBG00000022932	TNRC6B	99	83.961	Chrysemys_picta_bellii
ENSSHAG00000009692	TNRC6B	99	87.548	ENSCANG00000030776	TNRC6B	99	87.439	Colobus_angolensis_palliatus
ENSSHAG00000009692	TNRC6B	96	80.180	ENSCGRG00001020166	Tnrc6b	97	81.448	Cricetulus_griseus_chok1gshd
ENSSHAG00000009692	TNRC6B	99	80.358	ENSCGRG00000016696	Tnrc6b	99	81.308	Cricetulus_griseus_crigri
ENSSHAG00000009692	TNRC6B	99	87.602	ENSDNOG00000012744	TNRC6B	99	87.439	Dasypus_novemcinctus
ENSSHAG00000009692	TNRC6B	98	86.625	ENSDORG00000003386	Tnrc6b	97	86.470	Dipodomys_ordii
ENSSHAG00000009692	TNRC6B	99	72.693	ENSETEG00000006570	TNRC6B	99	72.419	Echinops_telfairi
ENSSHAG00000009692	TNRC6B	99	81.477	ENSEASG00005005306	TNRC6B	99	82.039	Equus_asinus_asinus
ENSSHAG00000009692	TNRC6B	99	88.161	ENSECAG00000009759	TNRC6B	99	88.557	Equus_caballus
ENSSHAG00000009692	TNRC6B	55	98.182	ENSEEUG00000008690	-	59	92.437	Erinaceus_europaeus
ENSSHAG00000009692	TNRC6B	99	87.480	ENSFCAG00000004791	TNRC6B	99	87.425	Felis_catus
ENSSHAG00000009692	TNRC6B	95	80.375	ENSFALG00000012195	TNRC6B	100	80.660	Ficedula_albicollis
ENSSHAG00000009692	TNRC6B	99	81.532	ENSFDAG00000021368	TNRC6B	97	82.324	Fukomys_damarensis
ENSSHAG00000009692	TNRC6B	95	91.333	ENSGALG00000012050	TNRC6B	97	82.305	Gallus_gallus
ENSSHAG00000009692	TNRC6B	99	85.403	ENSGAGG00000025188	TNRC6B	98	85.131	Gopherus_agassizii
ENSSHAG00000009692	TNRC6B	99	87.923	ENSGGOG00000008444	TNRC6B	99	87.814	Gorilla_gorilla
ENSSHAG00000009692	TNRC6B	99	86.616	ENSHGLG00000009306	TNRC6B	100	86.195	Heterocephalus_glaber_female
ENSSHAG00000009692	TNRC6B	99	81.284	ENSHGLG00100018108	TNRC6B	98	81.530	Heterocephalus_glaber_male
ENSSHAG00000009692	TNRC6B	99	81.447	ENSSTOG00000008927	TNRC6B	97	82.077	Ictidomys_tridecemlineatus
ENSSHAG00000009692	TNRC6B	99	80.065	ENSJJAG00000015779	Tnrc6b	97	80.950	Jaculus_jaculus
ENSSHAG00000009692	TNRC6B	99	58.417	ENSLACG00000000628	-	99	58.839	Latimeria_chalumnae
ENSSHAG00000009692	TNRC6B	79	89.167	ENSLAFG00000014473	TNRC6B	100	89.236	Loxodonta_africana
ENSSHAG00000009692	TNRC6B	99	87.220	ENSMFAG00000003862	TNRC6B	99	87.111	Macaca_fascicularis
ENSSHAG00000009692	TNRC6B	99	82.388	ENSMMUG00000021345	TNRC6B	97	84.744	Macaca_mulatta
ENSSHAG00000009692	TNRC6B	99	82.288	ENSMNEG00000042745	TNRC6B	99	82.259	Macaca_nemestrina
ENSSHAG00000009692	TNRC6B	99	87.712	ENSMLEG00000041780	TNRC6B	99	87.602	Mandrillus_leucophaeus
ENSSHAG00000009692	TNRC6B	99	85.939	ENSMGAG00000012333	TNRC6B	99	85.434	Meleagris_gallopavo
ENSSHAG00000009692	TNRC6B	99	80.087	ENSMAUG00000016123	Tnrc6b	98	81.308	Mesocricetus_auratus
ENSSHAG00000009692	TNRC6B	99	87.828	ENSMICG00000014056	TNRC6B	99	87.937	Microcebus_murinus
ENSSHAG00000009692	TNRC6B	96	86.567	ENSMOCG00000020334	Tnrc6b	97	86.070	Microtus_ochrogaster
ENSSHAG00000009692	TNRC6B	99	80.673	MGP_CAROLIEiJ_G0020043	Tnrc6b	97	81.788	Mus_caroli
ENSSHAG00000009692	TNRC6B	99	80.782	ENSMUSG00000047888	Tnrc6b	97	81.897	Mus_musculus
ENSSHAG00000009692	TNRC6B	99	80.989	MGP_PahariEiJ_G0020045	Tnrc6b	97	82.106	Mus_pahari
ENSSHAG00000009692	TNRC6B	99	86.532	MGP_SPRETEiJ_G0020941	Tnrc6b	97	86.532	Mus_spretus
ENSSHAG00000009692	TNRC6B	97	90.857	ENSMPUG00000016442	TNRC6B	96	90.857	Mustela_putorius_furo
ENSSHAG00000009692	TNRC6B	99	87.705	ENSMLUG00000008765	TNRC6B	99	87.596	Myotis_lucifugus
ENSSHAG00000009692	TNRC6B	99	80.705	ENSNGAG00000021294	Tnrc6b	97	81.600	Nannospalax_galili
ENSSHAG00000009692	TNRC6B	89	90.102	ENSNLEG00000015311	TNRC6B	94	89.917	Nomascus_leucogenys
ENSSHAG00000009692	TNRC6B	91	84.716	ENSOPRG00000012054	TNRC6B	88	84.581	Ochotona_princeps
ENSSHAG00000009692	TNRC6B	99	81.769	ENSODEG00000013146	TNRC6B	97	82.616	Octodon_degus
ENSSHAG00000009692	TNRC6B	98	39.200	ENSONIG00000019679	-	99	49.341	Oreochromis_niloticus
ENSSHAG00000009692	TNRC6B	99	80.958	ENSOCUG00000016128	TNRC6B	97	82.077	Oryctolagus_cuniculus
ENSSHAG00000009692	TNRC6B	99	87.296	ENSOGAG00000011096	TNRC6B	99	87.241	Otolemur_garnettii
ENSSHAG00000009692	TNRC6B	99	80.973	ENSOARG00000017238	TNRC6B	97	81.650	Ovis_aries
ENSSHAG00000009692	TNRC6B	99	87.978	ENSPPAG00000028514	TNRC6B	99	87.869	Pan_paniscus
ENSSHAG00000009692	TNRC6B	99	87.869	ENSPPRG00000017741	TNRC6B	99	87.760	Panthera_pardus
ENSSHAG00000009692	TNRC6B	99	83.488	ENSPTIG00000022064	TNRC6B	98	84.969	Panthera_tigris_altaica
ENSSHAG00000009692	TNRC6B	99	87.760	ENSPTRG00000047826	TNRC6B	99	87.705	Pan_troglodytes
ENSSHAG00000009692	TNRC6B	98	80.886	ENSPANG00000009271	TNRC6B	99	88.618	Papio_anubis
ENSSHAG00000009692	TNRC6B	99	80.981	ENSPSIG00000005318	TNRC6B	99	81.853	Pelodiscus_sinensis
ENSSHAG00000009692	TNRC6B	99	80.650	ENSPEMG00000011403	Tnrc6b	97	81.927	Peromyscus_maniculatus_bairdii
ENSSHAG00000009692	TNRC6B	99	94.530	ENSPCIG00000020347	TNRC6B	99	94.309	Phascolarctos_cinereus
ENSSHAG00000009692	TNRC6B	67	44.824	ENSPLAG00000001418	-	92	53.464	Poecilia_latipinna
ENSSHAG00000009692	TNRC6B	58	54.020	ENSPMEG00000006371	-	86	54.028	Poecilia_mexicana
ENSSHAG00000009692	TNRC6B	99	79.815	ENSPPYG00000011849	TNRC6B	100	84.615	Pongo_abelii
ENSSHAG00000009692	TNRC6B	72	79.303	ENSPCAG00000008739	TNRC6B	74	78.068	Procavia_capensis
ENSSHAG00000009692	TNRC6B	99	87.991	ENSPCOG00000020790	TNRC6B	99	88.100	Propithecus_coquereli
ENSSHAG00000009692	TNRC6B	92	83.484	ENSPVAG00000004975	TNRC6B	91	83.484	Pteropus_vampyrus
ENSSHAG00000009692	TNRC6B	61	56.364	ENSPNAG00000011713	tnrc6b	85	47.248	Pygocentrus_nattereri
ENSSHAG00000009692	TNRC6B	99	79.903	ENSRNOG00000024907	Tnrc6b	97	80.901	Rattus_norvegicus
ENSSHAG00000009692	TNRC6B	99	87.384	ENSRBIG00000035576	TNRC6B	99	87.275	Rhinopithecus_bieti
ENSSHAG00000009692	TNRC6B	99	87.329	ENSRROG00000031135	TNRC6B	99	87.220	Rhinopithecus_roxellana
ENSSHAG00000009692	TNRC6B	98	87.361	ENSSBOG00000029743	TNRC6B	98	87.584	Saimiri_boliviensis_boliviensis
ENSSHAG00000009692	TNRC6B	65	95.455	ENSSARG00000007971	-	70	95.455	Sorex_araneus
ENSSHAG00000009692	TNRC6B	92	84.725	ENSSPUG00000010801	TNRC6B	100	84.133	Sphenodon_punctatus
ENSSHAG00000009692	TNRC6B	99	88.087	ENSSSCG00000000078	TNRC6B	97	87.978	Sus_scrofa
ENSSHAG00000009692	TNRC6B	93	77.694	ENSTGUG00000010138	-	99	75.537	Taeniopygia_guttata
ENSSHAG00000009692	TNRC6B	94	91.486	ENSTTRG00000011465	TNRC6B	95	90.985	Tursiops_truncatus
ENSSHAG00000009692	TNRC6B	99	80.694	ENSUAMG00000007174	TNRC6B	98	82.262	Ursus_americanus
ENSSHAG00000009692	TNRC6B	99	81.733	ENSUMAG00000014336	TNRC6B	100	81.777	Ursus_maritimus
ENSSHAG00000009692	TNRC6B	69	76.444	ENSVPAG00000001467	TNRC6B	72	75.111	Vicugna_pacos
ENSSHAG00000009692	TNRC6B	99	87.950	ENSVVUG00000007064	TNRC6B	98	87.895	Vulpes_vulpes