EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSHAG00000009831 (Gene tree)
Gene ID
100926577
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Sarcophilus_harrisii
Status
putative
Strand
Minus strand
Length
37715 bases
Position
chrGL856993.1:595999-633713
Accession
100926577
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSHAP00000011437CSDPF00313.221.5e-8515
ENSSHAP00000011437CSDPF00313.221.5e-8525
ENSSHAP00000011437CSDPF00313.221.5e-8535
ENSSHAP00000011437CSDPF00313.221.5e-8545
ENSSHAP00000011437CSDPF00313.221.5e-8555
ENSSHAP00000011438CSDPF00313.222.9e-8515
ENSSHAP00000011438CSDPF00313.222.9e-8525
ENSSHAP00000011438CSDPF00313.222.9e-8535
ENSSHAP00000011438CSDPF00313.222.9e-8545
ENSSHAP00000011438CSDPF00313.222.9e-8555
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSHAT00000011533CSDE1-2013803XM_012549629ENSSHAP00000011437767 (aa)XP_012405083G3W7N2
ENSSHAT00000011534CSDE1-2023540-ENSSHAP00000011438816 (aa)-G3W7N3
Gene Model
Click here to download ENSSHAG00000009831's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000009831's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSHAG00000009831CSDE110095.958ENSG00000009307CSDE1100100.000Homo_sapiens
ENSSHAG00000009831CSDE110079.221ENSAPOG00000015538csde110079.221Acanthochromis_polyacanthus
ENSSHAG00000009831CSDE110094.785ENSAMEG00000017129CSDE110092.770Ailuropoda_melanoleuca
ENSSHAG00000009831CSDE19078.649ENSACIG00000015175csde110078.649Amphilophus_citrinellus
ENSSHAG00000009831CSDE110079.351ENSAOCG00000011510csde110079.351Amphiprion_ocellaris
ENSSHAG00000009831CSDE110079.351ENSAPEG00000007194csde110079.351Amphiprion_percula
ENSSHAG00000009831CSDE110078.961ENSATEG00000003864csde110078.961Anabas_testudineus
ENSSHAG00000009831CSDE110093.090ENSAPLG00000008797CSDE110093.090Anas_platyrhynchos
ENSSHAG00000009831CSDE110089.348ENSACAG00000003120CSDE110089.348Anolis_carolinensis
ENSSHAG00000009831CSDE110095.958ENSANAG00000024665CSDE110093.750Aotus_nancymaae
ENSSHAG00000009831CSDE19070.567ENSANAG00000028396-9070.567Aotus_nancymaae
ENSSHAG00000009831CSDE110078.674ENSACLG00000013296csde110078.674Astatotilapia_calliptera
ENSSHAG00000009831CSDE110078.080ENSAMXG00000007436csde110078.080Astyanax_mexicanus
ENSSHAG00000009831CSDE110095.567ENSBTAG00000000678CSDE110095.567Bos_taurus
ENSSHAG00000009831CSDE110095.958ENSCJAG00000012565CSDE110093.873Callithrix_jacchus
ENSSHAG00000009831CSDE19895.745ENSCAFG00000009618CSDE110093.758Canis_familiaris
ENSSHAG00000009831CSDE110095.828ENSCAFG00020000481CSDE110095.828Canis_lupus_dingo
ENSSHAG00000009831CSDE110095.698ENSCHIG00000017250CSDE110095.698Capra_hircus
ENSSHAG00000009831CSDE110095.958ENSTSYG00000003747CSDE110095.958Carlito_syrichta
ENSSHAG00000009831CSDE110066.332ENSCAPG00000015128CSDE110066.332Cavia_aperea
ENSSHAG00000009831CSDE110089.607ENSCPOG00000040388CSDE110089.607Cavia_porcellus
ENSSHAG00000009831CSDE19671.047ENSCCAG00000030878-9171.047Cebus_capucinus
ENSSHAG00000009831CSDE110095.958ENSCCAG00000036794CSDE110095.768Cebus_capucinus
ENSSHAG00000009831CSDE19573.515ENSCCAG00000033677-9973.159Cebus_capucinus
ENSSHAG00000009831CSDE110095.958ENSCATG00000036962CSDE110093.873Cercocebus_atys
ENSSHAG00000009831CSDE110095.828ENSCLAG00000006618CSDE110095.828Chinchilla_lanigera
ENSSHAG00000009831CSDE110092.231ENSCSAG00000001658CSDE110090.437Chlorocebus_sabaeus
ENSSHAG00000009831CSDE19988.745ENSCHOG00000000918CSDE19586.106Choloepus_hoffmanni
ENSSHAG00000009831CSDE110093.481ENSCPBG00000016547CSDE110093.481Chrysemys_picta_bellii
ENSSHAG00000009831CSDE19742.312ENSCING00000014465-9642.312Ciona_intestinalis
ENSSHAG00000009831CSDE19642.484ENSCSAVG00000008100-9842.484Ciona_savignyi
ENSSHAG00000009831CSDE110095.958ENSCANG00000035096CSDE110093.750Colobus_angolensis_palliatus
ENSSHAG00000009831CSDE19989.762ENSCANG00000031069-10089.762Colobus_angolensis_palliatus
ENSSHAG00000009831CSDE110095.176ENSCGRG00001016833-10095.176Cricetulus_griseus_chok1gshd
ENSSHAG00000009831CSDE110079.400ENSCGRG00001014011-10079.400Cricetulus_griseus_chok1gshd
ENSSHAG00000009831CSDE110083.478ENSCGRG00000005831-10083.478Cricetulus_griseus_crigri
ENSSHAG00000009831CSDE19694.878ENSCGRG00000002225-10094.878Cricetulus_griseus_crigri
ENSSHAG00000009831CSDE110078.283ENSCSEG00000002620csde110078.283Cynoglossus_semilaevis
ENSSHAG00000009831CSDE110078.571ENSCVAG00000001344csde110078.571Cyprinodon_variegatus
ENSSHAG00000009831CSDE110076.345ENSDARG00000074758csde110076.720Danio_rerio
ENSSHAG00000009831CSDE18069.962ENSDNOG00000034464-10069.962Dasypus_novemcinctus
ENSSHAG00000009831CSDE110095.833ENSDNOG00000010287-9495.466Dasypus_novemcinctus
ENSSHAG00000009831CSDE19994.461ENSDORG00000011609Csde110094.461Dipodomys_ordii
ENSSHAG00000009831CSDE19748.566FBgn0263352Unr7748.185Drosophila_melanogaster
ENSSHAG00000009831CSDE17967.550ENSETEG00000007109-9967.550Echinops_telfairi
ENSSHAG00000009831CSDE19394.815ENSETEG00000002491-8094.215Echinops_telfairi
ENSSHAG00000009831CSDE19084.652ENSETEG00000006280-10084.652Echinops_telfairi
ENSSHAG00000009831CSDE19974.935ENSETEG00000013678-9974.935Echinops_telfairi
ENSSHAG00000009831CSDE19954.557ENSEBUG00000008647csde19952.864Eptatretus_burgeri
ENSSHAG00000009831CSDE110096.089ENSEASG00005006284CSDE110093.382Equus_asinus_asinus
ENSSHAG00000009831CSDE110096.089ENSECAG00000020885CSDE19995.787Equus_caballus
ENSSHAG00000009831CSDE19398.429ENSEEUG00000006286CSDE17498.429Erinaceus_europaeus
ENSSHAG00000009831CSDE110077.361ENSELUG00000015507csde110077.361Esox_lucius
ENSSHAG00000009831CSDE110095.958ENSFCAG00000029266CSDE110095.958Felis_catus
ENSSHAG00000009831CSDE110089.223ENSFALG00000003407CSDE110089.223Ficedula_albicollis
ENSSHAG00000009831CSDE19995.359ENSFDAG00000007882CSDE110095.359Fukomys_damarensis
ENSSHAG00000009831CSDE19879.045ENSFHEG00000010799csde19979.045Fundulus_heteroclitus
ENSSHAG00000009831CSDE19975.282ENSGMOG00000012731csde110075.282Gadus_morhua
ENSSHAG00000009831CSDE19889.130ENSGALG00000002139CSDE19889.130Gallus_gallus
ENSSHAG00000009831CSDE19278.201ENSGAFG00000005241csde19578.201Gambusia_affinis
ENSSHAG00000009831CSDE19976.316ENSGACG00000004544csde110076.316Gasterosteus_aculeatus
ENSSHAG00000009831CSDE110093.611ENSGAGG00000017685CSDE110092.525Gopherus_agassizii
ENSSHAG00000009831CSDE110095.958ENSGGOG00000002164CSDE110095.958Gorilla_gorilla
ENSSHAG00000009831CSDE110078.674ENSHBUG00000020315csde110078.674Haplochromis_burtoni
ENSSHAG00000009831CSDE19686.637ENSHGLG00000010039-10086.637Heterocephalus_glaber_female
ENSSHAG00000009831CSDE110077.525ENSHGLG00000019549-10077.525Heterocephalus_glaber_female
ENSSHAG00000009831CSDE110085.658ENSHGLG00000009620-10085.919Heterocephalus_glaber_female
ENSSHAG00000009831CSDE19982.523ENSHGLG00000007471-9882.523Heterocephalus_glaber_female
ENSSHAG00000009831CSDE110086.310ENSHGLG00000003829-10086.310Heterocephalus_glaber_female
ENSSHAG00000009831CSDE19973.275ENSHGLG00000000650-9973.275Heterocephalus_glaber_female
ENSSHAG00000009831CSDE19986.078ENSHGLG00000008555-10086.078Heterocephalus_glaber_female
ENSSHAG00000009831CSDE110095.698ENSHGLG00100019438-10095.698Heterocephalus_glaber_male
ENSSHAG00000009831CSDE19381.172ENSHGLG00100004195-10081.172Heterocephalus_glaber_male
ENSSHAG00000009831CSDE19686.414ENSHGLG00100006910-10086.414Heterocephalus_glaber_male
ENSSHAG00000009831CSDE110081.617ENSHGLG00100012072-10081.617Heterocephalus_glaber_male
ENSSHAG00000009831CSDE110077.344ENSHGLG00100001846-10077.344Heterocephalus_glaber_male
ENSSHAG00000009831CSDE19979.065ENSHGLG00100004833-10079.065Heterocephalus_glaber_male
ENSSHAG00000009831CSDE19980.026ENSHGLG00100007287-9880.026Heterocephalus_glaber_male
ENSSHAG00000009831CSDE19977.847ENSHGLG00100002245-9977.847Heterocephalus_glaber_male
ENSSHAG00000009831CSDE110077.503ENSHCOG00000004158csde110077.503Hippocampus_comes
ENSSHAG00000009831CSDE110077.951ENSIPUG00000000355csde110077.951Ictalurus_punctatus
ENSSHAG00000009831CSDE110078.261ENSSTOG00000030994-10078.261Ictidomys_tridecemlineatus
ENSSHAG00000009831CSDE19291.608ENSSTOG00000032722-9891.608Ictidomys_tridecemlineatus
ENSSHAG00000009831CSDE19994.760ENSJJAG00000019571Csde110094.760Jaculus_jaculus
ENSSHAG00000009831CSDE110075.342ENSKMAG00000005685csde110074.969Kryptolebias_marmoratus
ENSSHAG00000009831CSDE110078.831ENSLBEG00000014770csde110078.831Labrus_bergylta
ENSSHAG00000009831CSDE110077.792ENSLACG00000018452CSDE19677.411Latimeria_chalumnae
ENSSHAG00000009831CSDE110078.670ENSLOCG00000010413csde19578.863Lepisosteus_oculatus
ENSSHAG00000009831CSDE110094.785ENSLAFG00000007150CSDE19694.785Loxodonta_africana
ENSSHAG00000009831CSDE110095.958ENSMFAG00000003674CSDE110095.958Macaca_fascicularis
ENSSHAG00000009831CSDE110095.958ENSMMUG00000001974CSDE110095.958Macaca_mulatta
ENSSHAG00000009831CSDE110095.958ENSMNEG00000045247CSDE110093.873Macaca_nemestrina
ENSSHAG00000009831CSDE110095.698ENSMLEG00000038673CSDE110093.627Mandrillus_leucophaeus
ENSSHAG00000009831CSDE110080.000ENSMAMG00000008821csde110080.000Mastacembelus_armatus
ENSSHAG00000009831CSDE110078.674ENSMZEG00005021675csde110078.674Maylandia_zebra
ENSSHAG00000009831CSDE110092.839ENSMGAG00000016381CSDE110092.839Meleagris_gallopavo
ENSSHAG00000009831CSDE19994.910ENSMAUG00000014031Csde110094.910Mesocricetus_auratus
ENSSHAG00000009831CSDE110095.437ENSMICG00000002050CSDE19995.312Microcebus_murinus
ENSSHAG00000009831CSDE110095.176ENSMOCG00000018960Csde110095.176Microtus_ochrogaster
ENSSHAG00000009831CSDE110079.351ENSMMOG00000015075csde110079.351Mola_mola
ENSSHAG00000009831CSDE110098.440ENSMODG00000004685CSDE110095.614Monodelphis_domestica
ENSSHAG00000009831CSDE110079.221ENSMALG00000007132csde110079.221Monopterus_albus
ENSSHAG00000009831CSDE110095.046MGP_CAROLIEiJ_G0025444Csde110095.046Mus_caroli
ENSSHAG00000009831CSDE110095.046ENSMUSG00000068823Csde110095.046Mus_musculus
ENSSHAG00000009831CSDE110095.306MGP_PahariEiJ_G0026888Csde110095.306Mus_pahari
ENSSHAG00000009831CSDE110095.306MGP_SPRETEiJ_G0026394Csde110095.306Mus_spretus
ENSSHAG00000009831CSDE19892.082ENSMPUG00000005753CSDE19992.082Mustela_putorius_furo
ENSSHAG00000009831CSDE110095.176ENSMLUG00000005681CSDE110093.137Myotis_lucifugus
ENSSHAG00000009831CSDE19667.929ENSNGAG00000012599-10067.929Nannospalax_galili
ENSSHAG00000009831CSDE19994.910ENSNGAG00000021929Csde110094.910Nannospalax_galili
ENSSHAG00000009831CSDE110078.674ENSNBRG00000020808csde110078.674Neolamprologus_brichardi
ENSSHAG00000009831CSDE110095.828ENSNLEG00000004842CSDE110093.750Nomascus_leucogenys
ENSSHAG00000009831CSDE19895.080ENSMEUG00000002677CSDE110095.080Notamacropus_eugenii
ENSSHAG00000009831CSDE19890.873ENSOPRG00000005002CSDE18890.873Ochotona_princeps
ENSSHAG00000009831CSDE19995.210ENSODEG00000007383-10095.210Octodon_degus
ENSSHAG00000009831CSDE19665.487ENSODEG00000005979-9865.487Octodon_degus
ENSSHAG00000009831CSDE110074.051ENSONIG00000009309csde110074.051Oreochromis_niloticus
ENSSHAG00000009831CSDE110077.930ENSOANG00000003346-10077.930Ornithorhynchus_anatinus
ENSSHAG00000009831CSDE110095.437ENSOCUG00000016438CSDE19595.071Oryctolagus_cuniculus
ENSSHAG00000009831CSDE110078.804ENSORLG00000000707csde110078.804Oryzias_latipes
ENSSHAG00000009831CSDE110075.815ENSORLG00020005148csde110074.051Oryzias_latipes_hni
ENSSHAG00000009831CSDE110078.804ENSORLG00015019415csde110078.804Oryzias_latipes_hsok
ENSSHAG00000009831CSDE110079.091ENSOMEG00000015656csde110079.091Oryzias_melastigma
ENSSHAG00000009831CSDE110095.958ENSOGAG00000012127CSDE110093.995Otolemur_garnettii
ENSSHAG00000009831CSDE110095.698ENSOARG00000020034CSDE110093.873Ovis_aries
ENSSHAG00000009831CSDE110095.958ENSPPAG00000025861CSDE110095.958Pan_paniscus
ENSSHAG00000009831CSDE110095.958ENSPPRG00000006747CSDE110093.995Panthera_pardus
ENSSHAG00000009831CSDE110095.958ENSPTIG00000015468CSDE110093.995Panthera_tigris_altaica
ENSSHAG00000009831CSDE110095.958ENSPTRG00000033721CSDE110093.873Pan_troglodytes
ENSSHAG00000009831CSDE110095.958ENSPANG00000018873CSDE110095.958Papio_anubis
ENSSHAG00000009831CSDE110078.804ENSPKIG00000009459csde110078.804Paramormyrops_kingsleyae
ENSSHAG00000009831CSDE19689.823ENSPSIG00000003823CSDE19689.823Pelodiscus_sinensis
ENSSHAG00000009831CSDE110078.831ENSPMGG00000000772csde110078.831Periophthalmus_magnuspinnatus
ENSSHAG00000009831CSDE19995.210ENSPEMG00000020357-10095.210Peromyscus_maniculatus_bairdii
ENSSHAG00000009831CSDE110096.222ENSPCIG00000022587CSDE110096.222Phascolarctos_cinereus
ENSSHAG00000009831CSDE19977.019ENSPFOG00000012664csde110077.484Poecilia_formosa
ENSSHAG00000009831CSDE19772.965ENSPLAG00000017680csde19372.965Poecilia_latipinna
ENSSHAG00000009831CSDE19872.534ENSPMEG00000005094csde19672.534Poecilia_mexicana
ENSSHAG00000009831CSDE110075.093ENSPREG00000011631csde110072.924Poecilia_reticulata
ENSSHAG00000009831CSDE110092.105ENSPPYG00000000996CSDE110092.105Pongo_abelii
ENSSHAG00000009831CSDE110091.656ENSPCAG00000014368CSDE110090.441Procavia_capensis
ENSSHAG00000009831CSDE19081.343ENSPCOG00000008223-9081.343Propithecus_coquereli
ENSSHAG00000009831CSDE110095.828ENSPCOG00000017893CSDE110095.828Propithecus_coquereli
ENSSHAG00000009831CSDE110089.831ENSPVAG00000008225CSDE110087.745Pteropus_vampyrus
ENSSHAG00000009831CSDE110078.674ENSPNYG00000013745csde110078.674Pundamilia_nyererei
ENSSHAG00000009831CSDE110078.831ENSPNAG00000001958csde110078.831Pygocentrus_nattereri
ENSSHAG00000009831CSDE110091.479ENSRNOG00000061058Csde110091.479Rattus_norvegicus
ENSSHAG00000009831CSDE110092.188ENSRBIG00000038088-9994.009Rhinopithecus_bieti
ENSSHAG00000009831CSDE110090.507ENSRBIG00000038966-10088.753Rhinopithecus_bieti
ENSSHAG00000009831CSDE110095.958ENSRROG00000043101CSDE110093.873Rhinopithecus_roxellana
ENSSHAG00000009831CSDE110095.958ENSSBOG00000035592CSDE110093.873Saimiri_boliviensis_boliviensis
ENSSHAG00000009831CSDE110078.674ENSSFOG00015007498csde110078.674Scleropages_formosus
ENSSHAG00000009831CSDE110079.351ENSSMAG00000007203csde110079.351Scophthalmus_maximus
ENSSHAG00000009831CSDE110079.091ENSSDUG00000015380csde110079.091Seriola_dumerili
ENSSHAG00000009831CSDE110079.091ENSSLDG00000008819csde110079.091Seriola_lalandi_dorsalis
ENSSHAG00000009831CSDE110095.567ENSSARG00000000738CSDE19695.256Sorex_araneus
ENSSHAG00000009831CSDE110093.220ENSSPUG00000008714CSDE110093.220Sphenodon_punctatus
ENSSHAG00000009831CSDE110079.610ENSSPAG00000000716csde110079.610Stegastes_partitus
ENSSHAG00000009831CSDE110095.958ENSSSCG00000006752CSDE110095.958Sus_scrofa
ENSSHAG00000009831CSDE110088.375ENSTGUG00000000972CSDE110088.375Taeniopygia_guttata
ENSSHAG00000009831CSDE110076.203ENSTRUG00000007996csde110076.203Takifugu_rubripes
ENSSHAG00000009831CSDE19375.096ENSTNIG00000010878csde110075.096Tetraodon_nigroviridis
ENSSHAG00000009831CSDE19397.436ENSTBEG00000011880-6797.436Tupaia_belangeri
ENSSHAG00000009831CSDE110095.176ENSTTRG00000015583CSDE110093.137Tursiops_truncatus
ENSSHAG00000009831CSDE18995.177ENSUAMG00000021779-10095.177Ursus_americanus
ENSSHAG00000009831CSDE18990.982ENSUAMG00000024289-9990.982Ursus_americanus
ENSSHAG00000009831CSDE110088.527ENSUMAG00000009720-9888.197Ursus_maritimus
ENSSHAG00000009831CSDE18695.487ENSUMAG00000011714-9995.487Ursus_maritimus
ENSSHAG00000009831CSDE110097.183ENSVPAG00000000749CSDE18597.183Vicugna_pacos
ENSSHAG00000009831CSDE19090.936ENSVVUG00000009890CSDE19490.936Vulpes_vulpes
ENSSHAG00000009831CSDE110083.770ENSXETG00000021448csde110083.770Xenopus_tropicalis
ENSSHAG00000009831CSDE19285.455ENSXCOG00000000035csde18585.455Xiphophorus_couchianus
ENSSHAG00000009831CSDE19879.443ENSXMAG00000009080csde19879.443Xiphophorus_maculatus

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