EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000009862 (Gene tree)
Gene ID: 100916666
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 54410 bases
Position: chrGL864866.1:600512-654921
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000011472	RRM_1	PF00076.22	2.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000011568	-	1347	-	ENSSHAP00000011472	348 (aa)	-	G3W7R7

Gene Model

Click here to download ENSSHAG00000009862's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr04114	Oocyte meiosis	KEGG
shr04914	Progesterone-mediated oocyte maturation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000009862's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000009862	-	63	90.135	ENSSHAG00000018596	-	96	90.135

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000009862	-	97	88.824	ENSG00000113742	CPEB4	100	88.824	Homo_sapiens
ENSSHAG00000009862	-	100	82.173	ENSAPOG00000006896	cpeb4a	100	83.284	Acanthochromis_polyacanthus
ENSSHAG00000009862	-	100	84.046	ENSAOCG00000015830	cpeb4a	100	83.284	Amphiprion_ocellaris
ENSSHAG00000009862	-	100	82.173	ENSAPEG00000011894	cpeb4a	100	83.284	Amphiprion_percula
ENSSHAG00000009862	-	88	97.049	ENSACAG00000012015	-	100	97.049	Anolis_carolinensis
ENSSHAG00000009862	-	100	85.960	ENSAMXG00000013453	-	87	85.960	Astyanax_mexicanus
ENSSHAG00000009862	-	100	87.143	ENSBTAG00000009995	CPEB4	100	85.882	Bos_taurus
ENSSHAG00000009862	-	63	90.991	ENSCAPG00000009045	-	97	90.991	Cavia_aperea
ENSSHAG00000009862	-	78	85.818	ENSCPOG00000015530	CPEB4	85	85.818	Cavia_porcellus
ENSSHAG00000009862	-	100	83.476	ENSDARG00000056691	cpeb4a	52	82.906	Danio_rerio
ENSSHAG00000009862	-	100	80.229	ENSEBUG00000008330	-	95	80.460	Eptatretus_burgeri
ENSSHAG00000009862	-	100	85.196	ENSECAG00000016921	CPEB4	51	85.196	Equus_caballus
ENSSHAG00000009862	-	100	85.196	ENSEEUG00000010887	CPEB4	53	85.196	Erinaceus_europaeus
ENSSHAG00000009862	-	98	83.478	ENSELUG00000005282	cpeb4a	99	83.591	Esox_lucius
ENSSHAG00000009862	-	100	87.143	ENSFDAG00000011935	CPEB4	88	87.143	Fukomys_damarensis
ENSSHAG00000009862	-	100	83.476	ENSGACG00000018422	cpeb4a	87	83.476	Gasterosteus_aculeatus
ENSSHAG00000009862	-	100	87.143	ENSHGLG00000008897	CPEB4	50	80.822	Heterocephalus_glaber_female
ENSSHAG00000009862	-	100	84.900	ENSHCOG00000003707	cpeb4a	100	83.871	Hippocampus_comes
ENSSHAG00000009862	-	100	87.143	ENSJJAG00000021518	Cpeb4	89	87.143	Jaculus_jaculus
ENSSHAG00000009862	-	100	84.046	ENSLBEG00000022823	cpeb4a	100	83.284	Labrus_bergylta
ENSSHAG00000009862	-	84	91.497	ENSLBEG00000027947	-	100	91.497	Labrus_bergylta
ENSSHAG00000009862	-	86	98.350	ENSLACG00000010027	-	96	98.350	Latimeria_chalumnae
ENSSHAG00000009862	-	100	81.766	ENSMZEG00005008957	cpeb4a	100	82.991	Maylandia_zebra
ENSSHAG00000009862	-	100	87.143	ENSMAUG00000011128	Cpeb4	88	87.143	Mesocricetus_auratus
ENSSHAG00000009862	-	100	87.143	ENSMOCG00000022941	Cpeb4	88	87.143	Microtus_ochrogaster
ENSSHAG00000009862	-	100	86.857	MGP_CAROLIEiJ_G0016172	Cpeb4	88	86.857	Mus_caroli
ENSSHAG00000009862	-	100	86.857	ENSMUSG00000020300	Cpeb4	88	86.857	Mus_musculus
ENSSHAG00000009862	-	100	87.143	MGP_PahariEiJ_G0017307	Cpeb4	88	87.143	Mus_pahari
ENSSHAG00000009862	-	100	86.857	MGP_SPRETEiJ_G0017016	Cpeb4	88	86.857	Mus_spretus
ENSSHAG00000009862	-	97	85.882	ENSMLUG00000014640	-	100	85.882	Myotis_lucifugus
ENSSHAG00000009862	-	100	87.143	ENSNGAG00000010735	Cpeb4	88	87.143	Nannospalax_galili
ENSSHAG00000009862	-	100	91.854	ENSMEUG00000008074	-	100	92.416	Notamacropus_eugenii
ENSSHAG00000009862	-	100	87.143	ENSODEG00000001934	CPEB4	88	87.143	Octodon_degus
ENSSHAG00000009862	-	100	82.173	ENSORLG00000007328	cpeb4a	100	82.991	Oryzias_latipes
ENSSHAG00000009862	-	100	81.894	ENSORLG00015006236	cpeb4a	100	82.991	Oryzias_latipes_hsok
ENSSHAG00000009862	-	100	81.894	ENSOMEG00000011206	cpeb4a	100	82.991	Oryzias_melastigma
ENSSHAG00000009862	-	97	88.529	ENSPPRG00000001603	CPEB4	100	88.529	Panthera_pardus
ENSSHAG00000009862	-	97	88.235	ENSPTIG00000015408	CPEB4	100	88.235	Panthera_tigris_altaica
ENSSHAG00000009862	-	100	85.920	ENSPMGG00000007127	CPEB4	65	85.920	Periophthalmus_magnuspinnatus
ENSSHAG00000009862	-	86	88.816	ENSPMAG00000004652	cpeb4a	94	90.132	Petromyzon_marinus
ENSSHAG00000009862	-	97	83.284	ENSPLAG00000017182	cpeb4a	100	83.284	Poecilia_latipinna
ENSSHAG00000009862	-	100	84.900	ENSPMEG00000003483	cpeb4a	100	83.284	Poecilia_mexicana
ENSSHAG00000009862	-	100	84.046	ENSSMAG00000008812	cpeb4a	100	83.284	Scophthalmus_maximus
ENSSHAG00000009862	-	97	83.284	ENSSLDG00000003652	cpeb4a	100	83.284	Seriola_lalandi_dorsalis
ENSSHAG00000009862	-	100	82.730	ENSTNIG00000017077	cpeb4a	56	82.730	Tetraodon_nigroviridis
ENSSHAG00000009862	-	87	89.474	ENSTNIG00000004021	-	98	89.474	Tetraodon_nigroviridis
ENSSHAG00000009862	-	100	92.286	ENSXCOG00000008579	-	93	92.286	Xiphophorus_couchianus
ENSSHAG00000009862	-	100	84.900	ENSXMAG00000010247	cpeb4a	100	83.284	Xiphophorus_maculatus