EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000010001 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 5586 bases
Position: chrGL834768.1:620980-626565
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000011638	RRM_1	PF00076.22	4.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000011734	-	864	-	ENSSHAP00000011638	287 (aa)	-	G3W883

Gene Model

Click here to download ENSSHAG00000010001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000010001's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000010001	-	82	45.122	ENSSHAG00000007707	-	90	45.690
ENSSHAG00000010001	-	50	61.379	ENSSHAG00000014841	-	87	50.244

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000010001	-	100	52.013	ENSG00000205022	PABPN1L	100	52.349	Homo_sapiens
ENSSHAG00000010001	-	71	57.353	ENSACAG00000013250	PABPN1L	98	57.353	Anolis_carolinensis
ENSSHAG00000010001	-	100	52.962	ENSANAG00000038178	PABPN1L	100	52.962	Aotus_nancymaae
ENSSHAG00000010001	-	54	55.128	ENSAMXG00000010873	PABPN1L	67	51.813	Astyanax_mexicanus
ENSSHAG00000010001	-	88	45.802	ENSBTAG00000023752	-	100	46.801	Bos_taurus
ENSSHAG00000010001	-	100	51.220	ENSCJAG00000045284	PABPN1L	100	50.338	Callithrix_jacchus
ENSSHAG00000010001	-	100	46.333	ENSCHIG00000013987	PABPN1L	100	46.333	Capra_hircus
ENSSHAG00000010001	-	92	48.718	ENSCAPG00000007240	PABPN1L	98	49.451	Cavia_aperea
ENSSHAG00000010001	-	100	47.440	ENSCPOG00000025951	PABPN1L	100	49.829	Cavia_porcellus
ENSSHAG00000010001	-	100	50.338	ENSCCAG00000027631	PABPN1L	100	52.265	Cebus_capucinus
ENSSHAG00000010001	-	100	51.525	ENSCATG00000031060	PABPN1L	100	52.203	Cercocebus_atys
ENSSHAG00000010001	-	100	48.789	ENSCLAG00000000704	PABPN1L	100	48.829	Chinchilla_lanigera
ENSSHAG00000010001	-	100	50.649	ENSCSAG00000002881	PABPN1L	100	50.649	Chlorocebus_sabaeus
ENSSHAG00000010001	-	61	61.017	ENSCPBG00000023441	PABPN1L	60	59.512	Chrysemys_picta_bellii
ENSSHAG00000010001	-	100	53.310	ENSCANG00000039336	PABPN1L	100	53.310	Colobus_angolensis_palliatus
ENSSHAG00000010001	-	100	51.568	ENSCGRG00001013211	Pabpn1l	100	51.568	Cricetulus_griseus_chok1gshd
ENSSHAG00000010001	-	100	51.568	ENSCGRG00000015868	Pabpn1l	100	51.568	Cricetulus_griseus_crigri
ENSSHAG00000010001	-	54	53.896	ENSCSEG00000001142	pabpn1l	63	52.841	Cynoglossus_semilaevis
ENSSHAG00000010001	-	100	45.946	ENSDNOG00000034677	PABPN1L	100	44.518	Dasypus_novemcinctus
ENSSHAG00000010001	-	100	51.724	ENSEASG00005000777	PABPN1L	100	51.408	Equus_asinus_asinus
ENSSHAG00000010001	-	100	51.724	ENSECAG00000000378	PABPN1L	100	51.379	Equus_caballus
ENSSHAG00000010001	-	100	47.405	ENSEEUG00000004747	PABPN1L	100	47.405	Erinaceus_europaeus
ENSSHAG00000010001	-	56	56.364	ENSELUG00000018385	PABPN1L	67	56.150	Esox_lucius
ENSSHAG00000010001	-	100	51.014	ENSFCAG00000010465	PABPN1L	100	52.027	Felis_catus
ENSSHAG00000010001	-	71	55.172	ENSFALG00000003319	PABPN1L	77	55.172	Ficedula_albicollis
ENSSHAG00000010001	-	100	47.241	ENSFDAG00000021067	PABPN1L	100	51.027	Fukomys_damarensis
ENSSHAG00000010001	-	61	59.551	ENSGALG00000006242	PABPN1L	99	59.551	Gallus_gallus
ENSSHAG00000010001	-	62	50.838	ENSGACG00000015428	PABPN1L	71	51.000	Gasterosteus_aculeatus
ENSSHAG00000010001	-	63	60.221	ENSGAGG00000010613	PABPN1L	57	60.221	Gopherus_agassizii
ENSSHAG00000010001	-	100	54.355	ENSGGOG00000012670	PABPN1L	100	51.333	Gorilla_gorilla
ENSSHAG00000010001	-	85	50.000	ENSHGLG00000014207	PABPN1L	90	47.566	Heterocephalus_glaber_female
ENSSHAG00000010001	-	85	50.000	ENSHGLG00100005230	PABPN1L	90	47.566	Heterocephalus_glaber_male
ENSSHAG00000010001	-	100	48.829	ENSSTOG00000020814	PABPN1L	100	48.829	Ictidomys_tridecemlineatus
ENSSHAG00000010001	-	100	48.485	ENSJJAG00000006433	Pabpn1l	100	48.621	Jaculus_jaculus
ENSSHAG00000010001	-	71	57.843	ENSLAFG00000025902	-	77	57.843	Loxodonta_africana
ENSSHAG00000010001	-	100	51.864	ENSMFAG00000002924	PABPN1L	100	52.542	Macaca_fascicularis
ENSSHAG00000010001	-	100	51.525	ENSMMUG00000012438	PABPN1L	100	52.203	Macaca_mulatta
ENSSHAG00000010001	-	100	51.864	ENSMNEG00000044808	PABPN1L	100	52.542	Macaca_nemestrina
ENSSHAG00000010001	-	100	51.864	ENSMLEG00000032667	PABPN1L	100	52.542	Mandrillus_leucophaeus
ENSSHAG00000010001	-	100	51.568	ENSMAUG00000014032	Pabpn1l	100	53.287	Mesocricetus_auratus
ENSSHAG00000010001	-	100	52.203	ENSMICG00000028179	PABPN1L	100	52.265	Microcebus_murinus
ENSSHAG00000010001	-	100	49.498	ENSMOCG00000007955	Pabpn1l	100	48.197	Microtus_ochrogaster
ENSSHAG00000010001	-	100	72.822	ENSMODG00000003873	-	100	72.822	Monodelphis_domestica
ENSSHAG00000010001	-	99	48.980	MGP_CAROLIEiJ_G0031670	Pabpn1l	99	48.980	Mus_caroli
ENSSHAG00000010001	-	99	48.980	ENSMUSG00000069867	Pabpn1l	99	48.980	Mus_musculus
ENSSHAG00000010001	-	99	49.315	MGP_PahariEiJ_G0023268	Pabpn1l	99	48.070	Mus_pahari
ENSSHAG00000010001	-	99	48.639	MGP_SPRETEiJ_G0032788	Pabpn1l	99	48.639	Mus_spretus
ENSSHAG00000010001	-	98	39.310	ENSMLUG00000003228	PABPN1L	97	37.954	Myotis_lucifugus
ENSSHAG00000010001	-	100	49.655	ENSNGAG00000023992	Pabpn1l	100	48.980	Nannospalax_galili
ENSSHAG00000010001	-	100	50.523	ENSOPRG00000005597	PABPN1L	100	50.523	Ochotona_princeps
ENSSHAG00000010001	-	100	47.475	ENSODEG00000004649	PABPN1L	100	47.475	Octodon_degus
ENSSHAG00000010001	-	100	54.355	ENSOANG00000013901	PABPN1L	100	55.052	Ornithorhynchus_anatinus
ENSSHAG00000010001	-	60	50.857	ENSORLG00000026560	PABPN1L	63	50.857	Oryzias_latipes
ENSSHAG00000010001	-	60	50.857	ENSORLG00020015068	PABPN1L	63	50.857	Oryzias_latipes_hni
ENSSHAG00000010001	-	60	50.857	ENSORLG00015000397	PABPN1L	63	50.857	Oryzias_latipes_hsok
ENSSHAG00000010001	-	100	53.659	ENSOGAG00000000433	PABPN1L	100	53.659	Otolemur_garnettii
ENSSHAG00000010001	-	89	50.896	ENSOARG00000013682	PABPN1L	100	50.804	Ovis_aries
ENSSHAG00000010001	-	100	52.349	ENSPPAG00000028866	PABPN1L	100	52.685	Pan_paniscus
ENSSHAG00000010001	-	100	50.000	ENSPPRG00000015106	PABPN1L	100	50.871	Panthera_pardus
ENSSHAG00000010001	-	92	48.529	ENSPTIG00000015606	PABPN1L	99	48.289	Panthera_tigris_altaica
ENSSHAG00000010001	-	100	52.349	ENSPTRG00000031120	PABPN1L	100	52.685	Pan_troglodytes
ENSSHAG00000010001	-	100	51.864	ENSPANG00000026039	PABPN1L	100	52.542	Papio_anubis
ENSSHAG00000010001	-	61	58.333	ENSPSIG00000003404	PABPN1L	100	56.731	Pelodiscus_sinensis
ENSSHAG00000010001	-	100	52.542	ENSPEMG00000016624	Pabpn1l	100	52.542	Peromyscus_maniculatus_bairdii
ENSSHAG00000010001	-	51	89.116	ENSPCIG00000007038	-	100	89.116	Phascolarctos_cinereus
ENSSHAG00000010001	-	100	52.349	ENSPPYG00000007655	PABPN1L	100	51.678	Pongo_abelii
ENSSHAG00000010001	-	100	50.000	ENSPCOG00000024077	PABPN1L	100	52.083	Propithecus_coquereli
ENSSHAG00000010001	-	100	50.333	ENSPVAG00000002716	PABPN1L	100	51.000	Pteropus_vampyrus
ENSSHAG00000010001	-	100	52.234	ENSRNOG00000029558	Pabpn1l	100	51.195	Rattus_norvegicus
ENSSHAG00000010001	-	100	51.864	ENSRBIG00000030740	PABPN1L	100	52.542	Rhinopithecus_bieti
ENSSHAG00000010001	-	100	52.881	ENSRROG00000032240	-	100	52.881	Rhinopithecus_roxellana
ENSSHAG00000010001	-	99	51.701	ENSRROG00000035483	-	99	52.381	Rhinopithecus_roxellana
ENSSHAG00000010001	-	100	49.662	ENSSBOG00000018410	PABPN1L	100	50.000	Saimiri_boliviensis_boliviensis
ENSSHAG00000010001	-	94	43.123	ENSSARG00000005178	-	99	43.123	Sorex_araneus
ENSSHAG00000010001	-	70	58.416	ENSSPUG00000007031	PABPN1L	86	58.454	Sphenodon_punctatus
ENSSHAG00000010001	-	100	43.434	ENSSSCG00000036367	PABPN1L	100	51.557	Sus_scrofa
ENSSHAG00000010001	-	54	54.545	ENSTRUG00000024725	PABPN1L	71	54.286	Takifugu_rubripes
ENSSHAG00000010001	-	100	49.324	ENSTTRG00000004691	PABPN1L	100	52.365	Tursiops_truncatus
ENSSHAG00000010001	-	57	55.090	ENSXETG00000011258	pabpn1l	91	52.427	Xenopus_tropicalis