EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000010146 (Gene tree)
Gene ID: 100921599
Gene Symbol: EIF5B
Alias: DKFZp434I036|FLJ10524|IF2|KIAA0741
Full Name: eukaryotic translation initiation factor 5B
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 71986 bases
Position: chrGL849832.1:643014-714999
Accession: 100921599
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000011818	IF-2	PF11987.8	4.1e-19	1	1
ENSSHAP00000011819	IF-2	PF11987.8	4.4e-19	1	1
ENSSHAP00000011818	GTP_EFTU	PF00009.27	3.8e-35	1	1
ENSSHAP00000011819	GTP_EFTU	PF00009.27	4.9e-35	1	1
ENSSHAP00000011818	MMR_HSR1	PF01926.23	4.1e-06	1	1
ENSSHAP00000011819	MMR_HSR1	PF01926.23	4.1e-06	1	1
ENSSHAP00000011819	GTP_EFTU_D2	PF03144.25	1.6e-09	1	1
ENSSHAP00000011818	GTP_EFTU_D2	PF03144.25	1.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000011915	EIF5B-201	3807	-	ENSSHAP00000011818	1224 (aa)	-	G3W8R3
ENSSHAT00000011916	EIF5B-202	3786	XM_012546151	ENSSHAP00000011819	1217 (aa)	XP_012401605	G3W8R4

Gene Model

Click here to download ENSSHAG00000010146's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000010146's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000010146	EIF5B	100	87.010	ENSG00000158417	EIF5B	100	86.765	Homo_sapiens
ENSSHAG00000010146	EIF5B	100	87.429	ENSAMEG00000013269	EIF5B	100	87.684	Ailuropoda_melanoleuca
ENSSHAG00000010146	EIF5B	99	82.146	ENSAPLG00000015401	EIF5B	100	82.815	Anas_platyrhynchos
ENSSHAG00000010146	EIF5B	100	86.754	ENSANAG00000017300	EIF5B	100	87.500	Aotus_nancymaae
ENSSHAG00000010146	EIF5B	99	86.921	ENSBTAG00000034255	EIF5B	99	87.758	Bos_taurus
ENSSHAG00000010146	EIF5B	100	88.408	ENSCAFG00000002278	EIF5B	100	88.163	Canis_familiaris
ENSSHAG00000010146	EIF5B	98	87.625	ENSCAFG00020024623	EIF5B	94	94.801	Canis_lupus_dingo
ENSSHAG00000010146	EIF5B	100	86.672	ENSCHIG00000027106	EIF5B	100	87.500	Capra_hircus
ENSSHAG00000010146	EIF5B	99	87.211	ENSTSYG00000011850	EIF5B	100	88.046	Carlito_syrichta
ENSSHAG00000010146	EIF5B	99	86.431	ENSCCAG00000027156	EIF5B	100	85.773	Cebus_capucinus
ENSSHAG00000010146	EIF5B	100	87.827	ENSCATG00000038292	EIF5B	100	87.827	Cercocebus_atys
ENSSHAG00000010146	EIF5B	100	84.521	ENSCLAG00000007674	EIF5B	100	85.597	Chinchilla_lanigera
ENSSHAG00000010146	EIF5B	100	87.265	ENSCSAG00000017209	EIF5B	100	87.265	Chlorocebus_sabaeus
ENSSHAG00000010146	EIF5B	100	83.306	ENSCPBG00000005318	EIF5B	100	83.293	Chrysemys_picta_bellii
ENSSHAG00000010146	EIF5B	100	87.316	ENSCANG00000042984	EIF5B	100	87.316	Colobus_angolensis_palliatus
ENSSHAG00000010146	EIF5B	100	85.434	ENSCGRG00001010937	Eif5b	100	86.356	Cricetulus_griseus_chok1gshd
ENSSHAG00000010146	EIF5B	99	85.372	ENSCGRG00000003140	Eif5b	100	86.304	Cricetulus_griseus_crigri
ENSSHAG00000010146	EIF5B	94	87.500	ENSDNOG00000005016	EIF5B	99	87.478	Dasypus_novemcinctus
ENSSHAG00000010146	EIF5B	100	84.137	ENSETEG00000001467	EIF5B	100	83.483	Echinops_telfairi
ENSSHAG00000010146	EIF5B	100	88.625	ENSEASG00005018269	EIF5B	100	88.462	Equus_asinus_asinus
ENSSHAG00000010146	EIF5B	100	88.235	ENSECAG00000000102	EIF5B	100	87.990	Equus_caballus
ENSSHAG00000010146	EIF5B	99	87.213	ENSFCAG00000009782	EIF5B	100	86.967	Felis_catus
ENSSHAG00000010146	EIF5B	100	85.352	ENSFDAG00000008737	EIF5B	100	86.928	Fukomys_damarensis
ENSSHAG00000010146	EIF5B	100	82.439	ENSGALG00000016764	EIF5B	100	82.602	Gallus_gallus
ENSSHAG00000010146	EIF5B	100	87.010	ENSGGOG00000001721	EIF5B	100	86.765	Gorilla_gorilla
ENSSHAG00000010146	EIF5B	100	87.653	ENSHGLG00000016367	EIF5B	100	87.408	Heterocephalus_glaber_female
ENSSHAG00000010146	EIF5B	100	87.735	ENSHGLG00100016185	EIF5B	100	87.490	Heterocephalus_glaber_male
ENSSHAG00000010146	EIF5B	100	88.480	ENSSTOG00000014283	EIF5B	100	88.235	Ictidomys_tridecemlineatus
ENSSHAG00000010146	EIF5B	100	67.911	ENSLOCG00000001405	EIF5B	100	68.471	Lepisosteus_oculatus
ENSSHAG00000010146	EIF5B	100	87.663	ENSLAFG00000006209	EIF5B	100	87.255	Loxodonta_africana
ENSSHAG00000010146	EIF5B	100	87.908	ENSMFAG00000038108	EIF5B	100	87.908	Macaca_fascicularis
ENSSHAG00000010146	EIF5B	100	87.827	ENSMMUG00000018946	EIF5B	100	87.827	Macaca_mulatta
ENSSHAG00000010146	EIF5B	100	87.990	ENSMNEG00000040038	EIF5B	100	87.990	Macaca_nemestrina
ENSSHAG00000010146	EIF5B	99	87.634	ENSMLEG00000031596	EIF5B	100	87.634	Mandrillus_leucophaeus
ENSSHAG00000010146	EIF5B	99	81.833	ENSMGAG00000014793	EIF5B	99	82.406	Meleagris_gallopavo
ENSSHAG00000010146	EIF5B	99	87.871	ENSMICG00000015960	EIF5B	99	88.696	Microcebus_murinus
ENSSHAG00000010146	EIF5B	100	84.477	MGP_CAROLIEiJ_G0014061	Eif5b	100	84.408	Mus_caroli
ENSSHAG00000010146	EIF5B	100	84.722	ENSMUSG00000026083	Eif5b	100	84.735	Mus_musculus
ENSSHAG00000010146	EIF5B	100	83.660	MGP_PahariEiJ_G0027308	Eif5b	100	84.980	Mus_pahari
ENSSHAG00000010146	EIF5B	100	84.641	MGP_SPRETEiJ_G0014865	Eif5b	100	84.653	Mus_spretus
ENSSHAG00000010146	EIF5B	100	87.745	ENSMPUG00000012068	EIF5B	100	87.663	Mustela_putorius_furo
ENSSHAG00000010146	EIF5B	99	85.903	ENSMLUG00000008119	EIF5B	100	86.831	Myotis_lucifugus
ENSSHAG00000010146	EIF5B	100	87.255	ENSNLEG00000014172	EIF5B	100	87.010	Nomascus_leucogenys
ENSSHAG00000010146	EIF5B	93	84.926	ENSOPRG00000007359	EIF5B	93	84.750	Ochotona_princeps
ENSSHAG00000010146	EIF5B	99	88.376	ENSOGAG00000013238	EIF5B	99	88.129	Otolemur_garnettii
ENSSHAG00000010146	EIF5B	100	86.825	ENSOARG00000013400	EIF5B	100	87.653	Ovis_aries
ENSSHAG00000010146	EIF5B	99	85.467	ENSPPAG00000029857	EIF5B	100	85.219	Pan_paniscus
ENSSHAG00000010146	EIF5B	99	87.974	ENSPPRG00000010820	EIF5B	99	87.727	Panthera_pardus
ENSSHAG00000010146	EIF5B	99	85.831	ENSPTIG00000021215	EIF5B	99	85.586	Panthera_tigris_altaica
ENSSHAG00000010146	EIF5B	100	87.173	ENSPTRG00000012279	EIF5B	100	86.928	Pan_troglodytes
ENSSHAG00000010146	EIF5B	100	87.673	ENSPANG00000021269	EIF5B	100	87.663	Papio_anubis
ENSSHAG00000010146	EIF5B	99	94.108	ENSPCIG00000011603	EIF5B	99	94.108	Phascolarctos_cinereus
ENSSHAG00000010146	EIF5B	84	83.949	ENSPPYG00000012094	EIF5B	100	84.630	Pongo_abelii
ENSSHAG00000010146	EIF5B	99	84.926	ENSRNOG00000023356	Eif5b	100	85.091	Rattus_norvegicus
ENSSHAG00000010146	EIF5B	100	84.735	ENSRNOG00000046621	AABR07043748.1	100	84.898	Rattus_norvegicus
ENSSHAG00000010146	EIF5B	99	85.608	ENSRBIG00000028180	EIF5B	99	84.818	Rhinopithecus_bieti
ENSSHAG00000010146	EIF5B	100	87.827	ENSRROG00000038801	EIF5B	100	87.745	Rhinopithecus_roxellana
ENSSHAG00000010146	EIF5B	100	87.173	ENSSBOG00000033578	EIF5B	100	86.928	Saimiri_boliviensis_boliviensis
ENSSHAG00000010146	EIF5B	99	88.201	ENSSARG00000002096	EIF5B	100	88.036	Sorex_araneus
ENSSHAG00000010146	EIF5B	99	79.918	ENSSPUG00000009445	EIF5B	100	79.426	Sphenodon_punctatus
ENSSHAG00000010146	EIF5B	100	87.572	ENSSSCG00000008180	EIF5B	100	87.244	Sus_scrofa
ENSSHAG00000010146	EIF5B	100	80.941	ENSTGUG00000010099	EIF5B	100	81.671	Taeniopygia_guttata
ENSSHAG00000010146	EIF5B	100	84.710	ENSTTRG00000010374	EIF5B	100	85.376	Tursiops_truncatus
ENSSHAG00000010146	EIF5B	99	86.892	ENSUMAG00000008519	EIF5B	99	87.809	Ursus_maritimus
ENSSHAG00000010146	EIF5B	88	86.191	ENSVPAG00000007725	EIF5B	100	86.006	Vicugna_pacos
ENSSHAG00000010146	EIF5B	100	88.408	ENSVVUG00000028702	EIF5B	100	88.163	Vulpes_vulpes