EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000010257 (Gene tree)
Gene ID: 100925390
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 15462 bases
Position: chrGL834651.1:656891-672352
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000011953	LSM	PF01423.22	5.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000012051	-	735	-	ENSSHAP00000011953	244 (aa)	-	G3W948

Gene Model

Click here to download ENSSHAG00000010257's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000010257's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000010257	-	98	96.250	ENSSHAG00000010394	SNRPB	100	96.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000010257	-	89	93.981	ENSG00000128739	SNRPN	98	100.000	Homo_sapiens
ENSSHAG00000010257	-	90	94.545	ENSAMEG00000007034	SNRPN	90	94.545	Ailuropoda_melanoleuca
ENSSHAG00000010257	-	96	89.712	ENSANAG00000034241	SNRPN	76	97.253	Aotus_nancymaae
ENSSHAG00000010257	-	91	93.665	ENSBTAG00000008251	SNRPN	96	93.897	Bos_taurus
ENSSHAG00000010257	-	87	93.897	ENSCJAG00000042622	-	77	96.175	Callithrix_jacchus
ENSSHAG00000010257	-	89	93.519	ENSCJAG00000003759	-	76	96.721	Callithrix_jacchus
ENSSHAG00000010257	-	91	94.118	ENSCAFG00000010127	SNRPN	92	94.118	Canis_familiaris
ENSSHAG00000010257	-	91	94.118	ENSCAFG00020024075	SNRPN	92	94.118	Canis_lupus_dingo
ENSSHAG00000010257	-	94	93.450	ENSCHIG00000017477	SNRPN	96	93.665	Capra_hircus
ENSSHAG00000010257	-	87	94.366	ENSTSYG00000005248	SNRPN	76	96.721	Carlito_syrichta
ENSSHAG00000010257	-	89	94.444	ENSCAPG00000003047	SNRPN	77	96.774	Cavia_aperea
ENSSHAG00000010257	-	89	94.444	ENSCPOG00000020270	SNRPN	77	96.774	Cavia_porcellus
ENSSHAG00000010257	-	89	93.981	ENSCCAG00000024231	SNRPN	76	96.721	Cebus_capucinus
ENSSHAG00000010257	-	89	93.981	ENSCATG00000032518	SNRPN	76	96.721	Cercocebus_atys
ENSSHAG00000010257	-	87	94.366	ENSCLAG00000011376	SNRPN	76	96.721	Chinchilla_lanigera
ENSSHAG00000010257	-	87	94.366	ENSCSAG00000006406	SNRPN	76	96.721	Chlorocebus_sabaeus
ENSSHAG00000010257	-	85	94.203	ENSCHOG00000001846	SNRPN	67	96.610	Choloepus_hoffmanni
ENSSHAG00000010257	-	89	93.981	ENSCANG00000041156	SNRPN	76	96.721	Colobus_angolensis_palliatus
ENSSHAG00000010257	-	87	94.340	ENSCGRG00001004136	Snrpn	76	96.175	Cricetulus_griseus_chok1gshd
ENSSHAG00000010257	-	87	94.340	ENSCGRG00000001621	Snrpn	76	96.721	Cricetulus_griseus_crigri
ENSSHAG00000010257	-	71	91.329	ENSCVAG00000014193	SNRPN	69	91.667	Cyprinodon_variegatus
ENSSHAG00000010257	-	75	96.196	ENSDNOG00000037060	SNRPN	75	96.196	Dasypus_novemcinctus
ENSSHAG00000010257	-	87	94.366	ENSDORG00000004527	Snrpn	76	96.721	Dipodomys_ordii
ENSSHAG00000010257	-	91	94.118	ENSEASG00005017871	SNRPN	92	94.118	Equus_asinus_asinus
ENSSHAG00000010257	-	91	94.118	ENSECAG00000018148	SNRPN	92	94.118	Equus_caballus
ENSSHAG00000010257	-	90	94.091	ENSEEUG00000007440	-	92	94.091	Erinaceus_europaeus
ENSSHAG00000010257	-	93	94.298	ENSFCAG00000022298	-	92	94.545	Felis_catus
ENSSHAG00000010257	-	75	81.967	ENSFDAG00000010528	-	68	87.770	Fukomys_damarensis
ENSSHAG00000010257	-	87	94.366	ENSFDAG00000016578	-	76	96.721	Fukomys_damarensis
ENSSHAG00000010257	-	88	69.302	ENSGGOG00000024469	-	69	82.482	Gorilla_gorilla
ENSSHAG00000010257	-	89	93.981	ENSGGOG00000003988	SNRPN	76	96.721	Gorilla_gorilla
ENSSHAG00000010257	-	87	94.366	ENSHGLG00000011924	SNRPN	76	96.721	Heterocephalus_glaber_female
ENSSHAG00000010257	-	71	82.081	ENSHGLG00000020936	-	71	80.240	Heterocephalus_glaber_female
ENSSHAG00000010257	-	87	86.385	ENSHGLG00000019812	-	76	87.978	Heterocephalus_glaber_female
ENSSHAG00000010257	-	98	80.417	ENSHGLG00000002327	-	75	81.421	Heterocephalus_glaber_female
ENSSHAG00000010257	-	87	86.385	ENSHGLG00100021056	-	76	87.978	Heterocephalus_glaber_male
ENSSHAG00000010257	-	87	94.366	ENSHGLG00100016559	SNRPN	76	96.721	Heterocephalus_glaber_male
ENSSHAG00000010257	-	98	77.917	ENSHGLG00100004881	-	75	79.235	Heterocephalus_glaber_male
ENSSHAG00000010257	-	87	94.366	ENSSTOG00000001339	SNRPN	76	96.721	Ictidomys_tridecemlineatus
ENSSHAG00000010257	-	87	94.811	ENSLAFG00000009458	SNRPN	76	97.253	Loxodonta_africana
ENSSHAG00000010257	-	89	93.981	ENSMFAG00000042235	SNRPN	76	96.721	Macaca_fascicularis
ENSSHAG00000010257	-	89	93.981	ENSMMUG00000023139	SNURF	76	96.721	Macaca_mulatta
ENSSHAG00000010257	-	89	93.981	ENSMNEG00000031291	SNRPN	76	96.721	Macaca_nemestrina
ENSSHAG00000010257	-	89	93.981	ENSMLEG00000038837	SNRPN	76	96.721	Mandrillus_leucophaeus
ENSSHAG00000010257	-	90	89.091	ENSMGAG00000008696	SNRPN	92	89.091	Meleagris_gallopavo
ENSSHAG00000010257	-	87	94.366	ENSMAUG00000000051	Snrpn	80	96.721	Mesocricetus_auratus
ENSSHAG00000010257	-	87	94.366	ENSMICG00000042356	SNRPN	76	96.721	Microcebus_murinus
ENSSHAG00000010257	-	87	94.366	ENSMOCG00000015350	Snrpn	76	96.721	Microtus_ochrogaster
ENSSHAG00000010257	-	98	97.083	ENSMODG00000013926	-	100	97.083	Monodelphis_domestica
ENSSHAG00000010257	-	87	94.366	MGP_CAROLIEiJ_G0029815	Snrpn	76	96.721	Mus_caroli
ENSSHAG00000010257	-	87	94.366	ENSMUSG00000102252	Snrpn	76	96.721	Mus_musculus
ENSSHAG00000010257	-	87	94.366	MGP_PahariEiJ_G0013040	Snrpn	76	96.721	Mus_pahari
ENSSHAG00000010257	-	87	94.366	MGP_SPRETEiJ_G0030918	Snrpn	76	96.721	Mus_spretus
ENSSHAG00000010257	-	96	49.573	ENSMPUG00000007115	-	63	69.504	Mustela_putorius_furo
ENSSHAG00000010257	-	91	94.118	ENSMPUG00000014638	-	92	94.118	Mustela_putorius_furo
ENSSHAG00000010257	-	90	94.545	ENSMLUG00000023361	-	90	94.545	Myotis_lucifugus
ENSSHAG00000010257	-	59	68.750	ENSMLUG00000024428	-	61	69.403	Myotis_lucifugus
ENSSHAG00000010257	-	66	61.875	ENSMLUG00000025849	-	72	62.179	Myotis_lucifugus
ENSSHAG00000010257	-	87	94.366	ENSNGAG00000000181	Snrpn	76	96.721	Nannospalax_galili
ENSSHAG00000010257	-	87	77.358	ENSNLEG00000001376	SNRPN	76	76.503	Nomascus_leucogenys
ENSSHAG00000010257	-	96	78.205	ENSODEG00000016065	-	73	90.683	Octodon_degus
ENSSHAG00000010257	-	86	94.787	ENSODEG00000019708	-	76	97.238	Octodon_degus
ENSSHAG00000010257	-	87	94.340	ENSODEG00000020110	-	76	96.703	Octodon_degus
ENSSHAG00000010257	-	87	94.366	ENSODEG00000013478	-	76	96.721	Octodon_degus
ENSSHAG00000010257	-	87	93.925	ENSOCUG00000003532	-	76	96.721	Oryctolagus_cuniculus
ENSSHAG00000010257	-	73	92.090	ENSORLG00020007490	SNRPN	69	92.262	Oryzias_latipes_hni
ENSSHAG00000010257	-	73	92.090	ENSORLG00015003332	SNRPN	69	92.262	Oryzias_latipes_hsok
ENSSHAG00000010257	-	73	92.655	ENSOMEG00000002066	SNRPN	69	92.857	Oryzias_melastigma
ENSSHAG00000010257	-	87	94.366	ENSOGAG00000007392	SNRPN	76	96.721	Otolemur_garnettii
ENSSHAG00000010257	-	91	93.665	ENSOARG00000009080	SNRPN	92	93.665	Ovis_aries
ENSSHAG00000010257	-	89	93.981	ENSPPAG00000027650	SNRPN	76	96.721	Pan_paniscus
ENSSHAG00000010257	-	95	65.812	ENSPPAG00000034049	-	65	78.322	Pan_paniscus
ENSSHAG00000010257	-	91	94.118	ENSPPRG00000019878	-	92	94.118	Panthera_pardus
ENSSHAG00000010257	-	84	62.439	ENSPPRG00000006957	-	73	69.536	Panthera_pardus
ENSSHAG00000010257	-	93	93.860	ENSPTIG00000004537	SNRPN	92	93.665	Panthera_tigris_altaica
ENSSHAG00000010257	-	89	93.981	ENSPTRG00000006826	SNRPN	76	96.721	Pan_troglodytes
ENSSHAG00000010257	-	95	66.239	ENSPTRG00000052400	-	65	79.021	Pan_troglodytes
ENSSHAG00000010257	-	89	93.981	ENSPANG00000020142	SNRPN	76	96.721	Papio_anubis
ENSSHAG00000010257	-	87	82.075	ENSPEMG00000013920	-	74	83.060	Peromyscus_maniculatus_bairdii
ENSSHAG00000010257	-	87	94.366	ENSPEMG00000012911	-	76	96.721	Peromyscus_maniculatus_bairdii
ENSSHAG00000010257	-	88	90.654	ENSPEMG00000020979	-	76	94.536	Peromyscus_maniculatus_bairdii
ENSSHAG00000010257	-	98	100.000	ENSPCIG00000004699	-	76	100.000	Phascolarctos_cinereus
ENSSHAG00000010257	-	71	92.486	ENSPMEG00000020674	SNRPN	69	92.262	Poecilia_mexicana
ENSSHAG00000010257	-	87	94.366	ENSPPYG00000006269	SNURF	76	96.721	Pongo_abelii
ENSSHAG00000010257	-	87	94.811	ENSPCOG00000014231	SNRPN	76	96.721	Propithecus_coquereli
ENSSHAG00000010257	-	87	94.366	ENSRNOG00000059764	Snrpn	76	96.721	Rattus_norvegicus
ENSSHAG00000010257	-	89	93.981	ENSRBIG00000041765	SNRPN	76	96.721	Rhinopithecus_bieti
ENSSHAG00000010257	-	89	93.981	ENSRROG00000035157	SNRPN	76	96.721	Rhinopithecus_roxellana
ENSSHAG00000010257	-	89	93.981	ENSSBOG00000000110	-	76	96.721	Saimiri_boliviensis_boliviensis
ENSSHAG00000010257	-	91	93.665	ENSSBOG00000024929	-	92	93.665	Saimiri_boliviensis_boliviensis
ENSSHAG00000010257	-	93	93.860	ENSSSCG00000028124	SNRPN	95	94.118	Sus_scrofa
ENSSHAG00000010257	-	91	93.665	ENSTTRG00000010966	SNRPN	82	93.665	Tursiops_truncatus
ENSSHAG00000010257	-	91	94.170	ENSUAMG00000016284	SNRPN	75	94.419	Ursus_americanus
ENSSHAG00000010257	-	91	94.118	ENSUMAG00000025589	SNRPN	92	94.118	Ursus_maritimus
ENSSHAG00000010257	-	93	94.298	ENSVVUG00000017971	SNRPN	90	94.545	Vulpes_vulpes