EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000010272 (Gene tree)
Gene ID: 100928695
Gene Symbol: NFX1
Alias: MGC20369|NFX2|TEG-42|Tex42
Full Name: charged multivesicular body protein 5
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 120548 bases
Position: chrGL841471.1:658934-779481
Accession: 100928434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000011975	R3H	PF01424.22	7.6e-16	1	1
ENSSHAP00000011976	R3H	PF01424.22	7.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000012072	NFX1-201	660	-	ENSSHAP00000011974	219 (aa)	XP_003761338	G3W969
ENSSHAT00000012073	NFX1-202	3468	-	ENSSHAP00000011975	1155 (aa)	-	G3W970
ENSSHAT00000012074	NFX1-203	3378	-	ENSSHAP00000011976	1125 (aa)	-	G3W971

Gene Model

Click here to download ENSSHAG00000010272's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr04144	Endocytosis	KEGG
shr04217	Necroptosis	KEGG
shr05165	Human papillomavirus infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000010272's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000010272	NFX1	100	70.406	ENSG00000086102	NFX1	100	70.406	Homo_sapiens
ENSSHAG00000010272	NFX1	86	59.448	ENSAPOG00000016671	si:dkey-10f23.2	89	59.631	Acanthochromis_polyacanthus
ENSSHAG00000010272	NFX1	100	70.671	ENSAMEG00000007472	NFX1	100	70.671	Ailuropoda_melanoleuca
ENSSHAG00000010272	NFX1	75	63.077	ENSACIG00000021055	si:dkey-10f23.2	78	63.539	Amphilophus_citrinellus
ENSSHAG00000010272	NFX1	83	59.979	ENSAOCG00000017316	si:dkey-10f23.2	93	60.169	Amphiprion_ocellaris
ENSSHAG00000010272	NFX1	83	59.979	ENSAPEG00000012401	si:dkey-10f23.2	97	55.493	Amphiprion_percula
ENSSHAG00000010272	NFX1	90	54.311	ENSATEG00000002080	si:dkey-10f23.2	94	53.149	Anabas_testudineus
ENSSHAG00000010272	NFX1	99	65.026	ENSAPLG00000005524	NFX1	99	65.993	Anas_platyrhynchos
ENSSHAG00000010272	NFX1	100	61.762	ENSACAG00000002412	NFX1	100	61.762	Anolis_carolinensis
ENSSHAG00000010272	NFX1	100	70.256	ENSANAG00000001809	NFX1	100	70.256	Aotus_nancymaae
ENSSHAG00000010272	NFX1	77	62.896	ENSACLG00000003795	si:dkey-10f23.2	82	63.224	Astatotilapia_calliptera
ENSSHAG00000010272	NFX1	74	61.621	ENSAMXG00000006963	si:dkey-10f23.2	95	52.070	Astyanax_mexicanus
ENSSHAG00000010272	NFX1	100	70.354	ENSBTAG00000012385	NFX1	100	70.354	Bos_taurus
ENSSHAG00000010272	NFX1	71	39.506	WBGene00007048	nfx-1	70	39.753	Caenorhabditis_elegans
ENSSHAG00000010272	NFX1	100	70.230	ENSCJAG00000008142	NFX1	100	70.230	Callithrix_jacchus
ENSSHAG00000010272	NFX1	100	71.164	ENSCAFG00000001848	NFX1	100	71.164	Canis_familiaris
ENSSHAG00000010272	NFX1	100	71.201	ENSCAFG00020015630	NFX1	100	71.201	Canis_lupus_dingo
ENSSHAG00000010272	NFX1	100	70.265	ENSCHIG00000020037	NFX1	100	70.265	Capra_hircus
ENSSHAG00000010272	NFX1	100	69.965	ENSTSYG00000004125	NFX1	100	70.141	Carlito_syrichta
ENSSHAG00000010272	NFX1	87	65.549	ENSCAPG00000005611	NFX1	99	65.749	Cavia_aperea
ENSSHAG00000010272	NFX1	100	69.700	ENSCPOG00000003470	NFX1	100	69.700	Cavia_porcellus
ENSSHAG00000010272	NFX1	100	70.230	ENSCCAG00000025001	NFX1	100	70.230	Cebus_capucinus
ENSSHAG00000010272	NFX1	100	65.959	ENSCLAG00000002893	NFX1	100	66.048	Chinchilla_lanigera
ENSSHAG00000010272	NFX1	100	70.141	ENSCSAG00000009971	NFX1	100	70.141	Chlorocebus_sabaeus
ENSSHAG00000010272	NFX1	89	72.894	ENSCHOG00000009225	NFX1	92	73.253	Choloepus_hoffmanni
ENSSHAG00000010272	NFX1	99	67.688	ENSCPBG00000017928	NFX1	98	68.046	Chrysemys_picta_bellii
ENSSHAG00000010272	NFX1	78	45.465	ENSCING00000004746	nf-x-like	77	45.567	Ciona_intestinalis
ENSSHAG00000010272	NFX1	66	49.735	ENSCSAVG00000005762	-	66	49.735	Ciona_savignyi
ENSSHAG00000010272	NFX1	100	67.694	ENSCANG00000028364	NFX1	100	67.694	Colobus_angolensis_palliatus
ENSSHAG00000010272	NFX1	99	66.043	ENSCGRG00001002869	Nfx1	100	66.043	Cricetulus_griseus_chok1gshd
ENSSHAG00000010272	NFX1	99	69.135	ENSCGRG00000016032	Nfx1	100	69.320	Cricetulus_griseus_crigri
ENSSHAG00000010272	NFX1	89	54.608	ENSCSEG00000019832	si:dkey-10f23.2	99	54.608	Cynoglossus_semilaevis
ENSSHAG00000010272	NFX1	78	62.743	ENSCVAG00000010039	si:dkey-10f23.2	79	62.959	Cyprinodon_variegatus
ENSSHAG00000010272	NFX1	100	50.653	ENSDARG00000105669	NFX1	100	50.740	Danio_rerio
ENSSHAG00000010272	NFX1	100	68.607	ENSDNOG00000002079	NFX1	100	68.607	Dasypus_novemcinctus
ENSSHAG00000010272	NFX1	99	64.248	ENSDORG00000001989	Nfx1	99	64.413	Dipodomys_ordii
ENSSHAG00000010272	NFX1	74	40.309	FBgn0001978	stc	74	40.453	Drosophila_melanogaster
ENSSHAG00000010272	NFX1	97	72.699	ENSETEG00000001427	NFX1	95	72.699	Echinops_telfairi
ENSSHAG00000010272	NFX1	70	57.035	ENSEBUG00000006923	si:dkey-10f23.2	62	57.125	Eptatretus_burgeri
ENSSHAG00000010272	NFX1	100	70.609	ENSEASG00005004230	NFX1	93	70.609	Equus_asinus_asinus
ENSSHAG00000010272	NFX1	100	70.521	ENSECAG00000021305	NFX1	93	70.521	Equus_caballus
ENSSHAG00000010272	NFX1	96	75.421	ENSEEUG00000001694	NFX1	94	70.226	Erinaceus_europaeus
ENSSHAG00000010272	NFX1	70	64.286	ENSELUG00000007422	si:dkey-10f23.2	99	50.302	Esox_lucius
ENSSHAG00000010272	NFX1	100	71.201	ENSFCAG00000007905	NFX1	100	71.201	Felis_catus
ENSSHAG00000010272	NFX1	99	65.757	ENSFALG00000013143	NFX1	99	65.901	Ficedula_albicollis
ENSSHAG00000010272	NFX1	100	69.700	ENSFDAG00000012320	NFX1	100	69.700	Fukomys_damarensis
ENSSHAG00000010272	NFX1	81	60.989	ENSFHEG00000017330	si:dkey-10f23.2	84	61.191	Fundulus_heteroclitus
ENSSHAG00000010272	NFX1	66	65.587	ENSGMOG00000006198	si:dkey-10f23.2	99	65.854	Gadus_morhua
ENSSHAG00000010272	NFX1	100	64.948	ENSGALG00000043724	NFX1	100	64.948	Gallus_gallus
ENSSHAG00000010272	NFX1	72	65.228	ENSGAFG00000000226	si:dkey-10f23.2	76	65.470	Gambusia_affinis
ENSSHAG00000010272	NFX1	66	64.161	ENSGACG00000004560	si:dkey-10f23.2	98	64.382	Gasterosteus_aculeatus
ENSSHAG00000010272	NFX1	100	70.230	ENSGGOG00000006751	NFX1	100	70.230	Gorilla_gorilla
ENSSHAG00000010272	NFX1	77	62.896	ENSHBUG00000015403	si:dkey-10f23.2	82	63.224	Haplochromis_burtoni
ENSSHAG00000010272	NFX1	100	70.053	ENSHGLG00000008375	NFX1	100	70.053	Heterocephalus_glaber_female
ENSSHAG00000010272	NFX1	100	70.053	ENSHGLG00100016433	NFX1	100	70.053	Heterocephalus_glaber_male
ENSSHAG00000010272	NFX1	70	64.528	ENSHCOG00000001235	si:dkey-10f23.2	78	64.646	Hippocampus_comes
ENSSHAG00000010272	NFX1	73	63.362	ENSIPUG00000005961	si:dkey-10f23.2	97	51.956	Ictalurus_punctatus
ENSSHAG00000010272	NFX1	100	69.665	ENSSTOG00000006984	NFX1	100	69.665	Ictidomys_tridecemlineatus
ENSSHAG00000010272	NFX1	100	69.265	ENSJJAG00000023303	Nfx1	100	69.265	Jaculus_jaculus
ENSSHAG00000010272	NFX1	76	62.911	ENSKMAG00000016306	si:dkey-10f23.2	78	63.133	Kryptolebias_marmoratus
ENSSHAG00000010272	NFX1	72	62.762	ENSLBEG00000013253	si:dkey-10f23.2	73	62.995	Labrus_bergylta
ENSSHAG00000010272	NFX1	99	61.304	ENSLACG00000000769	NFX1	99	65.377	Latimeria_chalumnae
ENSSHAG00000010272	NFX1	98	56.655	ENSLOCG00000011211	si:dkey-10f23.2	93	70.818	Lepisosteus_oculatus
ENSSHAG00000010272	NFX1	100	69.965	ENSMFAG00000038715	NFX1	100	69.965	Macaca_fascicularis
ENSSHAG00000010272	NFX1	100	69.965	ENSMMUG00000043096	NFX1	100	69.965	Macaca_mulatta
ENSSHAG00000010272	NFX1	100	70.053	ENSMNEG00000036057	NFX1	100	70.053	Macaca_nemestrina
ENSSHAG00000010272	NFX1	100	70.053	ENSMLEG00000040882	NFX1	100	70.053	Mandrillus_leucophaeus
ENSSHAG00000010272	NFX1	72	65.721	ENSMAMG00000010139	si:dkey-10f23.2	74	65.884	Mastacembelus_armatus
ENSSHAG00000010272	NFX1	77	62.896	ENSMZEG00005018390	si:dkey-10f23.2	82	63.224	Maylandia_zebra
ENSSHAG00000010272	NFX1	100	67.725	ENSMICG00000012124	NFX1	100	67.725	Microcebus_murinus
ENSSHAG00000010272	NFX1	100	69.558	ENSMOCG00000007616	Nfx1	100	69.558	Microtus_ochrogaster
ENSSHAG00000010272	NFX1	72	62.577	ENSMMOG00000004171	si:dkey-10f23.2	89	62.808	Mola_mola
ENSSHAG00000010272	NFX1	100	93.339	ENSMODG00000003990	NFX1	100	93.339	Monodelphis_domestica
ENSSHAG00000010272	NFX1	70	65.322	ENSMALG00000017326	si:dkey-10f23.2	85	65.570	Monopterus_albus
ENSSHAG00000010272	NFX1	100	69.646	MGP_CAROLIEiJ_G0025904	Nfx1	100	69.646	Mus_caroli
ENSSHAG00000010272	NFX1	100	69.823	ENSMUSG00000028423	Nfx1	100	69.823	Mus_musculus
ENSSHAG00000010272	NFX1	100	70.000	MGP_PahariEiJ_G0024027	Nfx1	100	70.000	Mus_pahari
ENSSHAG00000010272	NFX1	100	69.646	MGP_SPRETEiJ_G0026852	Nfx1	100	69.646	Mus_spretus
ENSSHAG00000010272	NFX1	100	71.025	ENSMPUG00000004111	NFX1	100	71.025	Mustela_putorius_furo
ENSSHAG00000010272	NFX1	100	68.993	ENSMLUG00000011069	NFX1	100	68.993	Myotis_lucifugus
ENSSHAG00000010272	NFX1	100	70.000	ENSNGAG00000005385	Nfx1	100	70.000	Nannospalax_galili
ENSSHAG00000010272	NFX1	77	62.712	ENSNBRG00000013449	si:dkey-10f23.2	82	63.039	Neolamprologus_brichardi
ENSSHAG00000010272	NFX1	100	69.788	ENSNLEG00000005096	NFX1	100	69.788	Nomascus_leucogenys
ENSSHAG00000010272	NFX1	99	92.528	ENSMEUG00000012002	NFX1	94	92.528	Notamacropus_eugenii
ENSSHAG00000010272	NFX1	97	70.108	ENSOPRG00000009816	NFX1	100	70.108	Ochotona_princeps
ENSSHAG00000010272	NFX1	100	69.523	ENSODEG00000015229	NFX1	100	69.523	Octodon_degus
ENSSHAG00000010272	NFX1	75	62.937	ENSONIG00000006192	si:dkey-10f23.2	79	63.158	Oreochromis_niloticus
ENSSHAG00000010272	NFX1	100	60.158	ENSOANG00000002524	NFX1	100	60.158	Ornithorhynchus_anatinus
ENSSHAG00000010272	NFX1	100	66.755	ENSOCUG00000008957	NFX1	100	66.932	Oryctolagus_cuniculus
ENSSHAG00000010272	NFX1	77	62.085	ENSORLG00000026662	si:dkey-10f23.2	85	62.299	Oryzias_latipes
ENSSHAG00000010272	NFX1	77	62.085	ENSORLG00020000170	si:dkey-10f23.2	85	62.299	Oryzias_latipes_hni
ENSSHAG00000010272	NFX1	77	62.314	ENSORLG00015008191	si:dkey-10f23.2	99	53.516	Oryzias_latipes_hsok
ENSSHAG00000010272	NFX1	84	58.610	ENSOMEG00000001814	si:dkey-10f23.2	92	59.077	Oryzias_melastigma
ENSSHAG00000010272	NFX1	100	68.198	ENSOGAG00000000775	NFX1	100	68.198	Otolemur_garnettii
ENSSHAG00000010272	NFX1	100	70.531	ENSOARG00000009478	NFX1	100	70.531	Ovis_aries
ENSSHAG00000010272	NFX1	100	70.406	ENSPPAG00000027871	NFX1	100	70.406	Pan_paniscus
ENSSHAG00000010272	NFX1	100	71.466	ENSPPRG00000000665	NFX1	100	71.466	Panthera_pardus
ENSSHAG00000010272	NFX1	100	71.466	ENSPTIG00000012443	NFX1	100	71.466	Panthera_tigris_altaica
ENSSHAG00000010272	NFX1	100	70.406	ENSPTRG00000020858	NFX1	100	70.406	Pan_troglodytes
ENSSHAG00000010272	NFX1	100	70.053	ENSPANG00000025304	NFX1	100	70.053	Papio_anubis
ENSSHAG00000010272	NFX1	71	67.758	ENSPKIG00000016899	si:dkey-10f23.2	73	68.015	Paramormyrops_kingsleyae
ENSSHAG00000010272	NFX1	99	67.832	ENSPSIG00000008420	NFX1	99	68.314	Pelodiscus_sinensis
ENSSHAG00000010272	NFX1	100	69.912	ENSPEMG00000007625	Nfx1	100	69.912	Peromyscus_maniculatus_bairdii
ENSSHAG00000010272	NFX1	70	57.357	ENSPMAG00000003556	si:dkey-10f23.2	100	57.447	Petromyzon_marinus
ENSSHAG00000010272	NFX1	72	65.721	ENSPFOG00000012547	si:dkey-10f23.2	76	65.965	Poecilia_formosa
ENSSHAG00000010272	NFX1	72	65.475	ENSPLAG00000010574	si:dkey-10f23.2	76	65.718	Poecilia_latipinna
ENSSHAG00000010272	NFX1	72	65.598	ENSPMEG00000015322	si:dkey-10f23.2	76	65.842	Poecilia_mexicana
ENSSHAG00000010272	NFX1	72	65.802	ENSPREG00000006186	si:dkey-10f23.2	76	65.965	Poecilia_reticulata
ENSSHAG00000010272	NFX1	62	81.312	ENSPPYG00000019136	-	100	81.662	Pongo_abelii
ENSSHAG00000010272	NFX1	94	68.182	ENSPCAG00000006913	NFX1	95	68.465	Procavia_capensis
ENSSHAG00000010272	NFX1	100	69.523	ENSPCOG00000015789	NFX1	100	69.523	Propithecus_coquereli
ENSSHAG00000010272	NFX1	95	78.423	ENSPVAG00000011479	NFX1	95	78.423	Pteropus_vampyrus
ENSSHAG00000010272	NFX1	77	62.783	ENSPNYG00000002175	si:dkey-10f23.2	82	63.110	Pundamilia_nyererei
ENSSHAG00000010272	NFX1	72	64.444	ENSPNAG00000016667	si:dkey-10f23.2	73	64.560	Pygocentrus_nattereri
ENSSHAG00000010272	NFX1	100	69.912	ENSRNOG00000009015	Nfx1	100	69.912	Rattus_norvegicus
ENSSHAG00000010272	NFX1	100	58.184	ENSRBIG00000036482	NFX1	77	58.184	Rhinopithecus_bieti
ENSSHAG00000010272	NFX1	100	70.141	ENSRROG00000026461	NFX1	99	72.031	Rhinopithecus_roxellana
ENSSHAG00000010272	NFX1	71	30.148	YNL023C	-	84	30.148	Saccharomyces_cerevisiae
ENSSHAG00000010272	NFX1	100	62.865	ENSSBOG00000035261	NFX1	100	62.865	Saimiri_boliviensis_boliviensis
ENSSHAG00000010272	NFX1	79	64.206	ENSSFOG00015019271	si:dkey-10f23.2	100	54.513	Scleropages_formosus
ENSSHAG00000010272	NFX1	80	60.109	ENSSMAG00000015963	si:dkey-10f23.2	99	55.303	Scophthalmus_maximus
ENSSHAG00000010272	NFX1	86	57.862	ENSSDUG00000009395	si:dkey-10f23.2	86	58.041	Seriola_dumerili
ENSSHAG00000010272	NFX1	74	64.439	ENSSLDG00000023817	si:dkey-10f23.2	95	53.860	Seriola_lalandi_dorsalis
ENSSHAG00000010272	NFX1	71	90.625	ENSSARG00000014320	NFX1	81	90.625	Sorex_araneus
ENSSHAG00000010272	NFX1	84	58.958	ENSSPAG00000012861	si:dkey-10f23.2	86	59.143	Stegastes_partitus
ENSSHAG00000010272	NFX1	100	69.224	ENSSSCG00000010994	NFX1	100	69.224	Sus_scrofa
ENSSHAG00000010272	NFX1	70	70.063	ENSTGUG00000007055	NFX1	100	70.328	Taeniopygia_guttata
ENSSHAG00000010272	NFX1	64	78.836	ENSTBEG00000004560	NFX1	59	80.108	Tupaia_belangeri
ENSSHAG00000010272	NFX1	100	80.943	ENSTTRG00000010576	NFX1	93	81.443	Tursiops_truncatus
ENSSHAG00000010272	NFX1	100	70.936	ENSUMAG00000006016	NFX1	100	70.936	Ursus_maritimus
ENSSHAG00000010272	NFX1	100	71.378	ENSVVUG00000021100	NFX1	100	71.378	Vulpes_vulpes
ENSSHAG00000010272	NFX1	99	61.465	ENSXETG00000014997	nfx1	100	61.465	Xenopus_tropicalis
ENSSHAG00000010272	NFX1	72	65.105	ENSXMAG00000001963	si:dkey-10f23.2	76	65.347	Xiphophorus_maculatus