EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000010331 (Gene tree)
Gene ID: 100926006
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 17993 bases
Position: chrGL834595.1:669114-687106
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000012049	RRM_5	PF13893.6	3.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000012147	-	2728	-	ENSSHAP00000012049	857 (aa)	-	G3W9E4

Gene Model

Click here to download ENSSHAG00000010331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000010331's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000010331	-	99	90.632	ENSG00000015479	MATR3	100	98.000	Homo_sapiens
ENSSHAG00000010331	-	99	85.778	ENSAMEG00000011347	-	100	85.889	Ailuropoda_melanoleuca
ENSSHAG00000010331	-	99	78.861	ENSAPLG00000008118	-	100	78.180	Anas_platyrhynchos
ENSSHAG00000010331	-	99	72.067	ENSACAG00000016233	-	99	71.763	Anolis_carolinensis
ENSSHAG00000010331	-	99	90.281	ENSANAG00000022951	-	100	90.867	Aotus_nancymaae
ENSSHAG00000010331	-	75	68.421	ENSANAG00000024654	-	99	68.421	Aotus_nancymaae
ENSSHAG00000010331	-	85	31.333	ENSAMXG00000010681	matr3l1.1	50	60.714	Astyanax_mexicanus
ENSSHAG00000010331	-	84	30.839	ENSAMXG00000010685	matr3l1.1	86	31.330	Astyanax_mexicanus
ENSSHAG00000010331	-	93	85.006	ENSBTAG00000006756	MATR3	99	85.106	Bos_taurus
ENSSHAG00000010331	-	99	85.428	ENSCJAG00000006888	-	99	87.767	Callithrix_jacchus
ENSSHAG00000010331	-	99	90.515	ENSCAFG00000001345	MATR3	100	91.101	Canis_familiaris
ENSSHAG00000010331	-	99	86.952	ENSCAFG00020010504	-	96	93.741	Canis_lupus_dingo
ENSSHAG00000010331	-	99	90.984	ENSCHIG00000025746	-	100	91.569	Capra_hircus
ENSSHAG00000010331	-	99	89.344	ENSTSYG00000011028	-	100	91.101	Carlito_syrichta
ENSSHAG00000010331	-	99	89.344	ENSCPOG00000014076	-	100	91.101	Cavia_porcellus
ENSSHAG00000010331	-	99	89.227	ENSCCAG00000025074	-	100	90.984	Cebus_capucinus
ENSSHAG00000010331	-	65	85.125	ENSCATG00000041304	-	99	86.918	Cercocebus_atys
ENSSHAG00000010331	-	99	89.578	ENSCLAG00000015998	-	100	91.335	Chinchilla_lanigera
ENSSHAG00000010331	-	99	89.578	ENSCSAG00000013075	-	100	91.335	Chlorocebus_sabaeus
ENSSHAG00000010331	-	99	78.751	ENSCPBG00000006303	-	100	79.167	Chrysemys_picta_bellii
ENSSHAG00000010331	-	99	88.173	ENSCANG00000028224	-	100	89.930	Colobus_angolensis_palliatus
ENSSHAG00000010331	-	99	90.867	ENSCGRG00001020227	Matr3	100	91.452	Cricetulus_griseus_chok1gshd
ENSSHAG00000010331	-	99	90.749	ENSCGRG00000011298	Matr3	100	91.335	Cricetulus_griseus_crigri
ENSSHAG00000010331	-	89	30.952	ENSCSEG00000012682	matr3l1.1	58	42.453	Cynoglossus_semilaevis
ENSSHAG00000010331	-	74	55.556	ENSCVAG00000005337	matr3l1.1	79	30.958	Cyprinodon_variegatus
ENSSHAG00000010331	-	99	85.936	ENSDNOG00000037723	-	100	85.920	Dasypus_novemcinctus
ENSSHAG00000010331	-	99	90.984	ENSEASG00005020857	-	100	91.569	Equus_asinus_asinus
ENSSHAG00000010331	-	99	90.984	ENSECAG00000012882	MATR3	100	91.569	Equus_caballus
ENSSHAG00000010331	-	72	52.941	ENSELUG00000021651	si:ch211-271b14.1	85	52.941	Esox_lucius
ENSSHAG00000010331	-	86	30.739	ENSELUG00000021848	matr3l1.1	79	30.998	Esox_lucius
ENSSHAG00000010331	-	99	90.867	ENSFCAG00000021911	-	100	91.452	Felis_catus
ENSSHAG00000010331	-	99	89.696	ENSFDAG00000017675	-	100	90.281	Fukomys_damarensis
ENSSHAG00000010331	-	99	79.080	ENSGALG00000002478	MATR3	100	78.399	Gallus_gallus
ENSSHAG00000010331	-	99	78.751	ENSGAGG00000011386	-	100	79.167	Gopherus_agassizii
ENSSHAG00000010331	-	99	90.749	ENSGGOG00000007308	-	100	91.335	Gorilla_gorilla
ENSSHAG00000010331	-	99	90.867	ENSHGLG00000004673	MATR3	100	91.452	Heterocephalus_glaber_female
ENSSHAG00000010331	-	60	88.372	ENSHGLG00100006442	-	100	88.372	Heterocephalus_glaber_male
ENSSHAG00000010331	-	63	35.912	ENSHCOG00000013223	matr3l1.1	83	30.958	Hippocampus_comes
ENSSHAG00000010331	-	99	90.749	ENSSTOG00000014746	-	100	91.452	Ictidomys_tridecemlineatus
ENSSHAG00000010331	-	99	90.035	ENSJJAG00000021710	-	100	90.621	Jaculus_jaculus
ENSSHAG00000010331	-	60	63.760	ENSJJAG00000011022	-	100	62.791	Jaculus_jaculus
ENSSHAG00000010331	-	99	56.243	ENSLACG00000006743	-	99	58.026	Latimeria_chalumnae
ENSSHAG00000010331	-	99	85.651	ENSMFAG00000000634	-	99	87.097	Macaca_fascicularis
ENSSHAG00000010331	-	99	85.651	ENSMMUG00000016741	MATR3	99	90.989	Macaca_mulatta
ENSSHAG00000010331	-	59	92.475	ENSMMUG00000015963	-	99	92.475	Macaca_mulatta
ENSSHAG00000010331	-	99	89.696	ENSMNEG00000042856	-	100	91.452	Macaca_nemestrina
ENSSHAG00000010331	-	99	89.696	ENSMLEG00000041178	-	100	91.452	Mandrillus_leucophaeus
ENSSHAG00000010331	-	71	57.407	ENSMAMG00000013840	matr3l1.1	73	53.030	Mastacembelus_armatus
ENSSHAG00000010331	-	99	79.080	ENSMGAG00000001331	-	100	78.399	Meleagris_gallopavo
ENSSHAG00000010331	-	99	90.632	ENSMAUG00000011647	Matr3	100	91.218	Mesocricetus_auratus
ENSSHAG00000010331	-	62	87.222	ENSMICG00000012438	-	98	87.500	Microcebus_murinus
ENSSHAG00000010331	-	99	90.632	ENSMOCG00000015711	Matr3	100	91.218	Microtus_ochrogaster
ENSSHAG00000010331	-	100	99.300	ENSMODG00000011925	-	100	99.300	Monodelphis_domestica
ENSSHAG00000010331	-	99	90.281	MGP_CAROLIEiJ_G0022108	Matr3	100	90.867	Mus_caroli
ENSSHAG00000010331	-	99	90.281	ENSMUSG00000037236	Matr3	100	90.867	Mus_musculus
ENSSHAG00000010331	-	99	90.281	MGP_PahariEiJ_G0018842	Matr3	100	90.867	Mus_pahari
ENSSHAG00000010331	-	99	89.930	MGP_SPRETEiJ_G0023020	Matr3	100	90.515	Mus_spretus
ENSSHAG00000010331	-	99	88.479	ENSMPUG00000009297	-	100	89.055	Mustela_putorius_furo
ENSSHAG00000010331	-	99	89.663	ENSMLUG00000005798	-	99	90.244	Myotis_lucifugus
ENSSHAG00000010331	-	99	90.164	ENSNGAG00000017452	Matr3	100	90.749	Nannospalax_galili
ENSSHAG00000010331	-	99	89.696	ENSNLEG00000009093	-	100	91.452	Nomascus_leucogenys
ENSSHAG00000010331	-	98	84.063	ENSOPRG00000016511	-	100	83.559	Ochotona_princeps
ENSSHAG00000010331	-	99	89.578	ENSODEG00000003015	-	100	91.335	Octodon_degus
ENSSHAG00000010331	-	99	90.515	ENSOCUG00000026311	MATR3	100	91.101	Oryctolagus_cuniculus
ENSSHAG00000010331	-	63	46.341	ENSORLG00020009362	matr3l1.1	80	32.188	Oryzias_latipes_hni
ENSSHAG00000010331	-	61	61.111	ENSORLG00015018551	matr3l1.1	75	46.512	Oryzias_latipes_hsok
ENSSHAG00000010331	-	66	34.921	ENSOMEG00000022287	matr3l1.1	81	31.934	Oryzias_melastigma
ENSSHAG00000010331	-	99	89.578	ENSOGAG00000010607	-	100	91.335	Otolemur_garnettii
ENSSHAG00000010331	-	100	91.047	ENSOARG00000016931	-	100	91.628	Ovis_aries
ENSSHAG00000010331	-	65	84.201	ENSPPAG00000026720	-	99	84.381	Pan_paniscus
ENSSHAG00000010331	-	99	86.096	ENSPPAG00000001418	-	99	87.276	Pan_paniscus
ENSSHAG00000010331	-	99	90.984	ENSPPRG00000008004	-	100	91.569	Panthera_pardus
ENSSHAG00000010331	-	95	91.432	ENSPTIG00000010711	-	100	91.432	Panthera_tigris_altaica
ENSSHAG00000010331	-	99	86.096	ENSPTRG00000017294	MATR3	99	87.276	Pan_troglodytes
ENSSHAG00000010331	-	99	88.290	ENSPANG00000012018	-	100	90.047	Papio_anubis
ENSSHAG00000010331	-	65	86.126	ENSPANG00000032489	-	99	87.928	Papio_anubis
ENSSHAG00000010331	-	96	33.161	ENSPKIG00000000333	matr3l1.1	56	67.857	Paramormyrops_kingsleyae
ENSSHAG00000010331	-	99	79.737	ENSPSIG00000014598	-	100	79.276	Pelodiscus_sinensis
ENSSHAG00000010331	-	99	90.515	ENSPEMG00000020679	Matr3	100	91.101	Peromyscus_maniculatus_bairdii
ENSSHAG00000010331	-	99	85.651	ENSPPYG00000015835	-	100	86.096	Pongo_abelii
ENSSHAG00000010331	-	99	90.398	ENSPCOG00000025718	-	100	90.984	Propithecus_coquereli
ENSSHAG00000010331	-	97	85.391	ENSPVAG00000015431	-	100	85.844	Pteropus_vampyrus
ENSSHAG00000010331	-	99	90.047	ENSRNOG00000019875	Matr3	100	90.632	Rattus_norvegicus
ENSSHAG00000010331	-	65	85.305	ENSRBIG00000034713	-	99	87.097	Rhinopithecus_bieti
ENSSHAG00000010331	-	99	87.354	ENSRROG00000039415	-	100	89.110	Rhinopithecus_roxellana
ENSSHAG00000010331	-	99	87.822	ENSRROG00000043949	-	100	89.578	Rhinopithecus_roxellana
ENSSHAG00000010331	-	99	89.344	ENSSBOG00000030159	-	100	91.101	Saimiri_boliviensis_boliviensis
ENSSHAG00000010331	-	61	57.407	ENSSDUG00000015369	matr3l1.1	79	31.983	Seriola_dumerili
ENSSHAG00000010331	-	99	76.232	ENSSPUG00000019236	-	100	76.645	Sphenodon_punctatus
ENSSHAG00000010331	-	99	90.984	ENSSSCG00000014343	-	100	91.569	Sus_scrofa
ENSSHAG00000010331	-	99	78.118	ENSTGUG00000014568	MATR3	99	78.204	Taeniopygia_guttata
ENSSHAG00000010331	-	60	59.184	ENSTNIG00000003166	matr3l1.1	72	59.184	Tetraodon_nigroviridis
ENSSHAG00000010331	-	82	93.172	ENSUAMG00000000097	-	95	93.883	Ursus_americanus
ENSSHAG00000010331	-	99	91.208	ENSUMAG00000015808	-	100	91.208	Ursus_maritimus
ENSSHAG00000010331	-	99	85.730	ENSVPAG00000006337	-	100	84.939	Vicugna_pacos
ENSSHAG00000010331	-	99	90.749	ENSVVUG00000020287	-	100	91.335	Vulpes_vulpes
ENSSHAG00000010331	-	99	53.443	ENSXETG00000003838	matr3	100	53.173	Xenopus_tropicalis
ENSSHAG00000010331	-	67	37.113	ENSXMAG00000014107	-	89	30.091	Xiphophorus_maculatus