EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000010333 (Gene tree)
Gene ID: 100930239
Gene Symbol: -
Alias: RecQ4
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 30985 bases
Position: chrGL841407.1:669283-700267
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000012052	zf-CCHC	PF00098.23	8.7e-05	1	1
ENSSHAP00000012051	zf-CCHC	PF00098.23	9.3e-05	1	1
ENSSHAP00000012052	DEAD	PF00270.29	5.6e-14	1	1
ENSSHAP00000012051	DEAD	PF00270.29	2.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000012150	-	3737	-	ENSSHAP00000012052	1239 (aa)	-	G3W9E7
ENSSHAT00000012149	-	3746	-	ENSSHAP00000012051	1243 (aa)	-	G3W9E6

Gene Model

Click here to download ENSSHAG00000010333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000010333's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000010333	-	100	52.832	ENSG00000160957	RECQL4	100	64.527	Homo_sapiens
ENSSHAG00000010333	-	99	41.091	ENSAPOG00000016945	recql4	100	41.001	Acanthochromis_polyacanthus
ENSSHAG00000010333	-	98	62.791	ENSAMEG00000005460	RECQL4	95	62.791	Ailuropoda_melanoleuca
ENSSHAG00000010333	-	81	54.589	ENSAOCG00000004254	recql4	73	48.397	Amphiprion_ocellaris
ENSSHAG00000010333	-	99	41.081	ENSAPEG00000005709	recql4	100	41.033	Amphiprion_percula
ENSSHAG00000010333	-	65	68.868	ENSATEG00000011464	recql4	87	70.103	Anabas_testudineus
ENSSHAG00000010333	-	99	56.414	ENSACAG00000010589	RECQL4	95	56.414	Anolis_carolinensis
ENSSHAG00000010333	-	70	62.211	ENSANAG00000024497	RECQL4	95	62.211	Aotus_nancymaae
ENSSHAG00000010333	-	83	54.890	ENSACLG00000011982	recql4	75	49.779	Astatotilapia_calliptera
ENSSHAG00000010333	-	64	60.377	ENSAMXG00000004768	recql4	80	46.027	Astyanax_mexicanus
ENSSHAG00000010333	-	100	61.928	ENSCJAG00000021401	RECQL4	95	61.928	Callithrix_jacchus
ENSSHAG00000010333	-	92	66.981	ENSCAFG00000001569	RECQL4	93	66.981	Canis_familiaris
ENSSHAG00000010333	-	99	49.882	ENSCHIG00000011146	RECQL4	91	58.318	Capra_hircus
ENSSHAG00000010333	-	69	63.727	ENSTSYG00000012090	RECQL4	99	60.066	Carlito_syrichta
ENSSHAG00000010333	-	85	60.963	ENSCAPG00000017735	RECQL4	94	60.963	Cavia_aperea
ENSSHAG00000010333	-	99	62.167	ENSCPOG00000015563	RECQL4	95	62.167	Cavia_porcellus
ENSSHAG00000010333	-	99	62.908	ENSCCAG00000035749	RECQL4	95	62.908	Cebus_capucinus
ENSSHAG00000010333	-	99	52.836	ENSCATG00000030745	RECQL4	95	62.189	Cercocebus_atys
ENSSHAG00000010333	-	99	61.653	ENSCLAG00000013847	RECQL4	95	61.678	Chinchilla_lanigera
ENSSHAG00000010333	-	99	52.241	ENSCSAG00000008275	RECQL4	95	61.818	Chlorocebus_sabaeus
ENSSHAG00000010333	-	72	53.496	ENSCPBG00000019003	RECQL4	100	52.000	Chrysemys_picta_bellii
ENSSHAG00000010333	-	94	62.189	ENSCANG00000043305	RECQL4	94	61.944	Colobus_angolensis_palliatus
ENSSHAG00000010333	-	99	50.744	ENSCGRG00001015863	Recql4	99	46.586	Cricetulus_griseus_chok1gshd
ENSSHAG00000010333	-	73	59.451	ENSCGRG00000013535	Recql4	88	59.649	Cricetulus_griseus_crigri
ENSSHAG00000010333	-	57	76.699	ENSCSEG00000014814	recql4	83	76.699	Cynoglossus_semilaevis
ENSSHAG00000010333	-	69	52.330	ENSCVAG00000007993	recql4	85	48.305	Cyprinodon_variegatus
ENSSHAG00000010333	-	99	52.344	ENSDARG00000077516	recql4	96	52.500	Danio_rerio
ENSSHAG00000010333	-	90	61.200	ENSDNOG00000002674	RECQL4	98	61.600	Dasypus_novemcinctus
ENSSHAG00000010333	-	100	49.377	ENSDORG00000002297	Recql4	100	49.296	Dipodomys_ordii
ENSSHAG00000010333	-	70	44.488	FBgn0040290	RecQ4	53	44.416	Drosophila_melanogaster
ENSSHAG00000010333	-	71	64.327	ENSETEG00000011107	RECQL4	80	70.339	Echinops_telfairi
ENSSHAG00000010333	-	79	63.793	ENSECAG00000018665	RECQL4	97	64.368	Equus_caballus
ENSSHAG00000010333	-	74	59.080	ENSEEUG00000005223	RECQL4	77	60.075	Erinaceus_europaeus
ENSSHAG00000010333	-	89	54.808	ENSELUG00000022177	recql4	85	48.256	Esox_lucius
ENSSHAG00000010333	-	99	52.050	ENSFDAG00000014917	RECQL4	99	51.537	Fukomys_damarensis
ENSSHAG00000010333	-	84	49.848	ENSFHEG00000009855	recql4	85	49.848	Fundulus_heteroclitus
ENSSHAG00000010333	-	99	51.525	ENSGMOG00000001340	recql4	95	51.364	Gadus_morhua
ENSSHAG00000010333	-	90	53.347	ENSGALG00000042375	-	64	53.347	Gallus_gallus
ENSSHAG00000010333	-	95	49.925	ENSGAFG00000009575	recql4	85	49.925	Gambusia_affinis
ENSSHAG00000010333	-	99	49.375	ENSGACG00000015014	recql4	88	49.375	Gasterosteus_aculeatus
ENSSHAG00000010333	-	91	57.367	ENSGAGG00000021941	RECQL4	80	56.426	Gopherus_agassizii
ENSSHAG00000010333	-	100	53.602	ENSGGOG00000014319	RECQL4	100	60.726	Gorilla_gorilla
ENSSHAG00000010333	-	83	54.818	ENSHBUG00000019085	recql4	75	49.926	Haplochromis_burtoni
ENSSHAG00000010333	-	93	61.695	ENSHGLG00000015925	RECQL4	93	61.628	Heterocephalus_glaber_female
ENSSHAG00000010333	-	90	61.695	ENSHGLG00100007626	RECQL4	93	61.628	Heterocephalus_glaber_male
ENSSHAG00000010333	-	69	52.030	ENSHCOG00000016157	recql4	99	50.515	Hippocampus_comes
ENSSHAG00000010333	-	99	58.123	ENSIPUG00000004473	recql4	91	58.123	Ictalurus_punctatus
ENSSHAG00000010333	-	99	60.833	ENSJJAG00000017588	Recql4	95	61.333	Jaculus_jaculus
ENSSHAG00000010333	-	83	50.978	ENSKMAG00000009537	recql4	95	51.433	Kryptolebias_marmoratus
ENSSHAG00000010333	-	59	71.094	ENSLBEG00000015884	recql4	85	73.276	Labrus_bergylta
ENSSHAG00000010333	-	85	57.621	ENSLACG00000004466	recql4	77	57.833	Latimeria_chalumnae
ENSSHAG00000010333	-	91	52.848	ENSLOCG00000007478	recql4	82	53.958	Lepisosteus_oculatus
ENSSHAG00000010333	-	93	62.667	ENSLAFG00000009512	RECQL4	95	62.667	Loxodonta_africana
ENSSHAG00000010333	-	99	52.292	ENSMFAG00000038185	RECQL4	95	62.023	Macaca_fascicularis
ENSSHAG00000010333	-	99	51.944	ENSMMUG00000015588	RECQL4	95	62.189	Macaca_mulatta
ENSSHAG00000010333	-	99	52.292	ENSMNEG00000036079	RECQL4	95	62.023	Macaca_nemestrina
ENSSHAG00000010333	-	94	61.692	ENSMLEG00000036034	RECQL4	99	59.956	Mandrillus_leucophaeus
ENSSHAG00000010333	-	80	55.128	ENSMAMG00000015565	recql4	74	49.375	Mastacembelus_armatus
ENSSHAG00000010333	-	57	70.000	ENSMZEG00005026699	recql4	88	70.000	Maylandia_zebra
ENSSHAG00000010333	-	99	51.575	ENSMAUG00000008628	Recql4	99	51.575	Mesocricetus_auratus
ENSSHAG00000010333	-	73	59.276	ENSMICG00000015923	RECQL4	100	59.276	Microcebus_murinus
ENSSHAG00000010333	-	100	52.407	ENSMOCG00000009648	Recql4	100	51.896	Microtus_ochrogaster
ENSSHAG00000010333	-	57	74.038	ENSMMOG00000018356	recql4	85	74.038	Mola_mola
ENSSHAG00000010333	-	99	69.632	ENSMODG00000011014	RECQL4	100	69.555	Monodelphis_domestica
ENSSHAG00000010333	-	56	76.238	ENSMALG00000007361	recql4	85	76.238	Monopterus_albus
ENSSHAG00000010333	-	99	51.608	MGP_CAROLIEiJ_G0019945	Recql4	99	51.330	Mus_caroli
ENSSHAG00000010333	-	99	51.060	ENSMUSG00000033762	Recql4	99	51.099	Mus_musculus
ENSSHAG00000010333	-	99	51.835	MGP_PahariEiJ_G0019955	Recql4	99	51.791	Mus_pahari
ENSSHAG00000010333	-	99	51.373	MGP_SPRETEiJ_G0020848	Recql4	99	50.980	Mus_spretus
ENSSHAG00000010333	-	86	55.853	ENSMPUG00000006086	RECQL4	94	61.526	Mustela_putorius_furo
ENSSHAG00000010333	-	100	53.474	ENSMLUG00000011295	RECQL4	100	54.248	Myotis_lucifugus
ENSSHAG00000010333	-	99	62.479	ENSNGAG00000004346	Recql4	95	62.479	Nannospalax_galili
ENSSHAG00000010333	-	96	53.234	ENSNLEG00000010900	RECQL4	95	53.234	Nomascus_leucogenys
ENSSHAG00000010333	-	84	79.636	ENSMEUG00000001818	-	100	76.400	Notamacropus_eugenii
ENSSHAG00000010333	-	76	60.502	ENSOPRG00000002588	RECQL4	83	54.984	Ochotona_princeps
ENSSHAG00000010333	-	99	52.504	ENSODEG00000012082	RECQL4	99	52.385	Octodon_degus
ENSSHAG00000010333	-	81	56.933	ENSONIG00000019801	recql4	83	53.061	Oreochromis_niloticus
ENSSHAG00000010333	-	98	54.818	ENSOANG00000003526	RECQL4	100	54.553	Ornithorhynchus_anatinus
ENSSHAG00000010333	-	100	51.074	ENSORLG00000024764	recql4	100	37.776	Oryzias_latipes
ENSSHAG00000010333	-	66	58.442	ENSOMEG00000023534	recql4	84	60.000	Oryzias_melastigma
ENSSHAG00000010333	-	100	49.341	ENSOGAG00000013008	RECQL4	95	59.901	Otolemur_garnettii
ENSSHAG00000010333	-	88	52.394	ENSOARG00000012917	RECQL4	96	52.170	Ovis_aries
ENSSHAG00000010333	-	94	53.140	ENSPPAG00000038772	RECQL4	89	61.983	Pan_paniscus
ENSSHAG00000010333	-	99	53.510	ENSPTRG00000048119	RECQL4	100	60.506	Pan_troglodytes
ENSSHAG00000010333	-	99	52.955	ENSPANG00000024705	RECQL4	95	62.687	Papio_anubis
ENSSHAG00000010333	-	94	54.492	ENSPKIG00000020206	recql4	80	54.425	Paramormyrops_kingsleyae
ENSSHAG00000010333	-	87	50.236	ENSPMGG00000021408	recql4	95	50.236	Periophthalmus_magnuspinnatus
ENSSHAG00000010333	-	100	52.648	ENSPEMG00000008586	Recql4	100	52.292	Peromyscus_maniculatus_bairdii
ENSSHAG00000010333	-	89	51.318	ENSPFOG00000005814	recql4	84	52.665	Poecilia_formosa
ENSSHAG00000010333	-	89	49.319	ENSPLAG00000011704	recql4	85	51.433	Poecilia_latipinna
ENSSHAG00000010333	-	89	49.319	ENSPMEG00000011683	recql4	85	51.433	Poecilia_mexicana
ENSSHAG00000010333	-	99	51.846	ENSPREG00000012196	recql4	95	51.846	Poecilia_reticulata
ENSSHAG00000010333	-	99	62.211	ENSPPYG00000018984	RECQL4	95	62.273	Pongo_abelii
ENSSHAG00000010333	-	53	69.767	ENSPCAG00000014090	-	60	72.881	Procavia_capensis
ENSSHAG00000010333	-	73	59.824	ENSPCOG00000013744	RECQL4	100	59.715	Propithecus_coquereli
ENSSHAG00000010333	-	94	61.765	ENSPVAG00000006784	RECQL4	100	49.117	Pteropus_vampyrus
ENSSHAG00000010333	-	57	70.000	ENSPNYG00000008927	recql4	88	70.000	Pundamilia_nyererei
ENSSHAG00000010333	-	95	53.722	ENSPNAG00000005987	recql4	85	53.722	Pygocentrus_nattereri
ENSSHAG00000010333	-	99	51.890	ENSRNOG00000032446	Recql4	99	51.494	Rattus_norvegicus
ENSSHAG00000010333	-	95	61.842	ENSRROG00000040848	RECQL4	100	59.780	Rhinopithecus_roxellana
ENSSHAG00000010333	-	94	62.957	ENSSBOG00000021445	RECQL4	95	62.957	Saimiri_boliviensis_boliviensis
ENSSHAG00000010333	-	87	73.832	ENSSFOG00015010493	recql4	81	73.832	Scleropages_formosus
ENSSHAG00000010333	-	61	58.824	ENSSMAG00000005002	recql4	98	51.519	Scophthalmus_maximus
ENSSHAG00000010333	-	61	67.769	ENSSDUG00000013245	recql4	92	67.769	Seriola_dumerili
ENSSHAG00000010333	-	61	67.769	ENSSLDG00000016407	recql4	92	67.769	Seriola_lalandi_dorsalis
ENSSHAG00000010333	-	73	62.500	ENSSARG00000013351	-	87	62.500	Sorex_araneus
ENSSHAG00000010333	-	63	68.116	ENSSPUG00000018087	RECQL4	94	69.118	Sphenodon_punctatus
ENSSHAG00000010333	-	57	76.699	ENSSPAG00000006827	recql4	86	76.699	Stegastes_partitus
ENSSHAG00000010333	-	94	62.355	ENSSSCG00000025736	RECQL4	98	61.354	Sus_scrofa
ENSSHAG00000010333	-	79	52.128	ENSTRUG00000012749	recql4	98	48.952	Takifugu_rubripes
ENSSHAG00000010333	-	93	52.707	ENSTNIG00000017539	recql4	83	52.707	Tetraodon_nigroviridis
ENSSHAG00000010333	-	94	58.472	ENSUMAG00000019403	RECQL4	93	58.472	Ursus_maritimus
ENSSHAG00000010333	-	77	50.612	ENSXETG00000016582	recql4	72	50.612	Xenopus_tropicalis
ENSSHAG00000010333	-	57	77.228	ENSXCOG00000019857	recql4	84	77.228	Xiphophorus_couchianus
ENSSHAG00000010333	-	57	78.218	ENSXMAG00000015315	recql4	84	78.218	Xiphophorus_maculatus