EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000010394 (Gene tree)
Gene ID: 100925653
Gene Symbol: SNRPB
Alias: COD|SNRPB1|Sm-B/B'|SmB/SmB'|snRNP-B
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 11062 bases
Position: chrGL834651.1:679175-690236
Accession: 100925653
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000012131	LSM	PF01423.22	5.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000012229	SNRPB-201	2610	-	ENSSHAP00000012131	240 (aa)	XP_003757352	G3W9M6

Gene Model

Click here to download ENSSHAG00000010394's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03040	Spliceosome	KEGG
shr05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000010394's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000010394	SNRPB	100	96.250	ENSSHAG00000010257	-	98	96.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000010394	SNRPB	100	98.333	ENSG00000125835	SNRPB	100	98.333	Homo_sapiens
ENSSHAG00000010394	SNRPB	75	93.370	ENSAPOG00000019606	snrpb	56	95.238	Acanthochromis_polyacanthus
ENSSHAG00000010394	SNRPB	99	98.326	ENSAMEG00000011353	SNRPB	98	98.326	Ailuropoda_melanoleuca
ENSSHAG00000010394	SNRPB	73	93.143	ENSACIG00000014480	snrpb	71	95.062	Amphilophus_citrinellus
ENSSHAG00000010394	SNRPB	75	93.370	ENSAOCG00000006876	snrpb	69	95.238	Amphiprion_ocellaris
ENSSHAG00000010394	SNRPB	75	93.370	ENSAPEG00000021585	snrpb	71	95.238	Amphiprion_percula
ENSSHAG00000010394	SNRPB	75	92.818	ENSATEG00000009836	snrpb	69	94.643	Anabas_testudineus
ENSSHAG00000010394	SNRPB	97	96.121	ENSACAG00000002053	SNRPB	100	96.121	Anolis_carolinensis
ENSSHAG00000010394	SNRPB	96	90.909	ENSANAG00000036271	-	79	92.347	Aotus_nancymaae
ENSSHAG00000010394	SNRPB	100	98.333	ENSANAG00000024443	-	100	98.333	Aotus_nancymaae
ENSSHAG00000010394	SNRPB	75	93.370	ENSACLG00000014707	snrpb	69	95.238	Astatotilapia_calliptera
ENSSHAG00000010394	SNRPB	76	93.443	ENSAMXG00000029434	snrpb	70	94.643	Astyanax_mexicanus
ENSSHAG00000010394	SNRPB	95	97.817	ENSBTAG00000001038	SNRPB	99	97.817	Bos_taurus
ENSSHAG00000010394	SNRPB	95	98.253	ENSCJAG00000020971	-	99	98.253	Callithrix_jacchus
ENSSHAG00000010394	SNRPB	89	90.187	ENSCJAG00000023097	-	70	92.857	Callithrix_jacchus
ENSSHAG00000010394	SNRPB	78	87.895	ENSCAFG00000031109	-	79	84.211	Canis_familiaris
ENSSHAG00000010394	SNRPB	95	98.253	ENSCAFG00000006693	-	99	98.253	Canis_familiaris
ENSSHAG00000010394	SNRPB	100	98.333	ENSCAFG00020016981	-	100	98.333	Canis_lupus_dingo
ENSSHAG00000010394	SNRPB	95	97.817	ENSCHIG00000025449	-	99	97.817	Capra_hircus
ENSSHAG00000010394	SNRPB	97	74.138	ENSTSYG00000032303	-	55	78.667	Carlito_syrichta
ENSSHAG00000010394	SNRPB	95	98.253	ENSTSYG00000014498	-	99	98.253	Carlito_syrichta
ENSSHAG00000010394	SNRPB	99	98.326	ENSCAPG00000012669	SNRPB	99	98.326	Cavia_aperea
ENSSHAG00000010394	SNRPB	95	98.253	ENSCPOG00000039408	SNRPB	99	98.253	Cavia_porcellus
ENSSHAG00000010394	SNRPB	100	98.333	ENSCCAG00000026002	SNRPB	100	98.333	Cebus_capucinus
ENSSHAG00000010394	SNRPB	53	87.402	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSSHAG00000010394	SNRPB	95	98.253	ENSCATG00000030230	SNRPB	99	98.253	Cercocebus_atys
ENSSHAG00000010394	SNRPB	100	97.083	ENSCLAG00000012442	SNRPB	100	97.083	Chinchilla_lanigera
ENSSHAG00000010394	SNRPB	95	98.253	ENSCSAG00000010840	SNRPB	99	98.253	Chlorocebus_sabaeus
ENSSHAG00000010394	SNRPB	100	97.500	ENSCPBG00000026801	SNRPB	100	97.500	Chrysemys_picta_bellii
ENSSHAG00000010394	SNRPB	100	98.333	ENSCANG00000019461	SNRPB	100	98.333	Colobus_angolensis_palliatus
ENSSHAG00000010394	SNRPB	95	98.253	ENSCGRG00001023046	Snrpb	99	98.253	Cricetulus_griseus_chok1gshd
ENSSHAG00000010394	SNRPB	92	98.190	ENSCGRG00000010423	Snrpb	98	98.190	Cricetulus_griseus_crigri
ENSSHAG00000010394	SNRPB	76	92.896	ENSCSEG00000020328	snrpb	70	95.238	Cynoglossus_semilaevis
ENSSHAG00000010394	SNRPB	70	93.452	ENSDARG00000011125	snrpb	69	95.238	Danio_rerio
ENSSHAG00000010394	SNRPB	72	93.642	ENSDNOG00000007896	-	71	93.642	Dasypus_novemcinctus
ENSSHAG00000010394	SNRPB	100	98.333	ENSDNOG00000015545	-	100	98.333	Dasypus_novemcinctus
ENSSHAG00000010394	SNRPB	96	97.826	ENSDORG00000029558	Snrpb	100	97.826	Dipodomys_ordii
ENSSHAG00000010394	SNRPB	62	70.470	FBgn0262601	SmB	74	70.470	Drosophila_melanogaster
ENSSHAG00000010394	SNRPB	76	78.689	ENSETEG00000006830	SNRPB	74	77.381	Echinops_telfairi
ENSSHAG00000010394	SNRPB	75	79.570	ENSEBUG00000007467	SNRPB	62	87.919	Eptatretus_burgeri
ENSSHAG00000010394	SNRPB	95	97.817	ENSEASG00005012991	SNRPB	99	97.817	Equus_asinus_asinus
ENSSHAG00000010394	SNRPB	95	98.253	ENSECAG00000011944	SNRPB	99	98.253	Equus_caballus
ENSSHAG00000010394	SNRPB	72	99.422	ENSEEUG00000015568	SNRPB	61	99.422	Erinaceus_europaeus
ENSSHAG00000010394	SNRPB	100	95.417	ENSELUG00000014564	snrpb	100	95.417	Esox_lucius
ENSSHAG00000010394	SNRPB	95	98.253	ENSFCAG00000034090	-	99	98.253	Felis_catus
ENSSHAG00000010394	SNRPB	97	96.983	ENSFALG00000004866	SNRPB	100	96.983	Ficedula_albicollis
ENSSHAG00000010394	SNRPB	99	98.326	ENSFDAG00000009937	SNRPB	99	98.253	Fukomys_damarensis
ENSSHAG00000010394	SNRPB	100	97.083	ENSGALG00000035421	SNRPN	100	97.083	Gallus_gallus
ENSSHAG00000010394	SNRPB	72	93.605	ENSGAFG00000019558	snrpb	72	94.611	Gambusia_affinis
ENSSHAG00000010394	SNRPB	76	91.803	ENSGACG00000003262	snrpb	70	95.238	Gasterosteus_aculeatus
ENSSHAG00000010394	SNRPB	100	97.500	ENSGAGG00000001308	SNRPB	100	97.500	Gopherus_agassizii
ENSSHAG00000010394	SNRPB	95	98.253	ENSGGOG00000016138	SNRPB	99	98.253	Gorilla_gorilla
ENSSHAG00000010394	SNRPB	75	93.370	ENSHBUG00000008369	snrpb	69	95.238	Haplochromis_burtoni
ENSSHAG00000010394	SNRPB	95	98.253	ENSHGLG00000016241	-	99	98.253	Heterocephalus_glaber_female
ENSSHAG00000010394	SNRPB	63	89.333	ENSHGLG00000016505	-	72	89.333	Heterocephalus_glaber_female
ENSSHAG00000010394	SNRPB	100	98.333	ENSHGLG00100012877	-	100	98.333	Heterocephalus_glaber_male
ENSSHAG00000010394	SNRPB	63	89.333	ENSHGLG00100004178	-	72	89.333	Heterocephalus_glaber_male
ENSSHAG00000010394	SNRPB	76	92.896	ENSHCOG00000014888	snrpb	70	95.238	Hippocampus_comes
ENSSHAG00000010394	SNRPB	70	93.452	ENSIPUG00000024569	SNRPB	70	95.238	Ictalurus_punctatus
ENSSHAG00000010394	SNRPB	90	78.802	ENSSTOG00000027821	-	62	98.529	Ictidomys_tridecemlineatus
ENSSHAG00000010394	SNRPB	100	96.667	ENSSTOG00000033664	-	100	96.667	Ictidomys_tridecemlineatus
ENSSHAG00000010394	SNRPB	95	98.253	ENSJJAG00000024170	Snrpb	99	98.253	Jaculus_jaculus
ENSSHAG00000010394	SNRPB	72	94.798	ENSKMAG00000014494	snrpb	68	95.833	Kryptolebias_marmoratus
ENSSHAG00000010394	SNRPB	76	92.896	ENSLBEG00000005678	snrpb	70	95.238	Labrus_bergylta
ENSSHAG00000010394	SNRPB	92	93.665	ENSLACG00000011459	SNRPB	92	93.665	Latimeria_chalumnae
ENSSHAG00000010394	SNRPB	70	94.643	ENSLOCG00000002687	snrpb	70	95.833	Lepisosteus_oculatus
ENSSHAG00000010394	SNRPB	95	94.298	ENSLAFG00000017588	SNRPB	99	94.298	Loxodonta_africana
ENSSHAG00000010394	SNRPB	95	98.253	ENSMFAG00000038756	SNRPB	99	98.253	Macaca_fascicularis
ENSSHAG00000010394	SNRPB	95	98.253	ENSMMUG00000010050	SNRPB	99	98.253	Macaca_mulatta
ENSSHAG00000010394	SNRPB	95	98.253	ENSMNEG00000027954	SNRPB	99	98.253	Macaca_nemestrina
ENSSHAG00000010394	SNRPB	100	98.333	ENSMLEG00000022346	SNRPB	100	98.333	Mandrillus_leucophaeus
ENSSHAG00000010394	SNRPB	75	93.333	ENSMAMG00000009294	snrpb	67	95.210	Mastacembelus_armatus
ENSSHAG00000010394	SNRPB	75	93.370	ENSMZEG00005011856	snrpb	69	95.238	Maylandia_zebra
ENSSHAG00000010394	SNRPB	76	89.071	ENSMICG00000015983	-	84	89.071	Microcebus_murinus
ENSSHAG00000010394	SNRPB	95	97.817	ENSMICG00000016519	SNRPB	99	97.817	Microcebus_murinus
ENSSHAG00000010394	SNRPB	95	97.817	ENSMOCG00000002892	-	99	97.817	Microtus_ochrogaster
ENSSHAG00000010394	SNRPB	70	69.461	ENSMOCG00000021362	-	72	72.832	Microtus_ochrogaster
ENSSHAG00000010394	SNRPB	76	92.857	ENSMMOG00000013226	snrpb	71	95.210	Mola_mola
ENSSHAG00000010394	SNRPB	75	92.818	ENSMALG00000020839	snrpb	56	94.643	Monopterus_albus
ENSSHAG00000010394	SNRPB	95	98.253	MGP_CAROLIEiJ_G0024293	Snrpb	99	98.253	Mus_caroli
ENSSHAG00000010394	SNRPB	95	98.253	ENSMUSG00000027404	Snrpb	99	98.253	Mus_musculus
ENSSHAG00000010394	SNRPB	95	98.253	MGP_PahariEiJ_G0025738	Snrpb	99	98.253	Mus_pahari
ENSSHAG00000010394	SNRPB	95	98.253	MGP_SPRETEiJ_G0025213	Snrpb	99	98.253	Mus_spretus
ENSSHAG00000010394	SNRPB	95	98.253	ENSMPUG00000009283	SNRPB	99	98.253	Mustela_putorius_furo
ENSSHAG00000010394	SNRPB	100	95.000	ENSMLUG00000016951	SNRPB	100	95.000	Myotis_lucifugus
ENSSHAG00000010394	SNRPB	95	98.253	ENSNGAG00000012051	Snrpb	99	98.253	Nannospalax_galili
ENSSHAG00000010394	SNRPB	75	90.608	ENSNBRG00000006353	snrpb	62	93.902	Neolamprologus_brichardi
ENSSHAG00000010394	SNRPB	100	98.333	ENSNLEG00000029067	SNRPB	100	98.333	Nomascus_leucogenys
ENSSHAG00000010394	SNRPB	94	99.111	ENSMEUG00000015625	SNRPB	100	99.111	Notamacropus_eugenii
ENSSHAG00000010394	SNRPB	100	93.750	ENSODEG00000016060	-	100	93.750	Octodon_degus
ENSSHAG00000010394	SNRPB	99	94.561	ENSODEG00000004305	-	99	98.253	Octodon_degus
ENSSHAG00000010394	SNRPB	75	93.370	ENSONIG00000000248	snrpb	69	95.238	Oreochromis_niloticus
ENSSHAG00000010394	SNRPB	100	97.917	ENSOCUG00000014042	-	100	97.917	Oryctolagus_cuniculus
ENSSHAG00000010394	SNRPB	75	92.737	ENSOCUG00000022423	-	86	95.833	Oryctolagus_cuniculus
ENSSHAG00000010394	SNRPB	89	70.423	ENSOCUG00000026813	-	63	70.270	Oryctolagus_cuniculus
ENSSHAG00000010394	SNRPB	93	92.793	ENSOCUG00000021456	-	92	92.793	Oryctolagus_cuniculus
ENSSHAG00000010394	SNRPB	75	92.818	ENSORLG00000021862	snrpb	69	95.238	Oryzias_latipes
ENSSHAG00000010394	SNRPB	100	98.333	ENSOGAG00000016149	SNRPB	100	98.333	Otolemur_garnettii
ENSSHAG00000010394	SNRPB	95	97.817	ENSOARG00000006740	SNRPB	99	97.817	Ovis_aries
ENSSHAG00000010394	SNRPB	95	98.253	ENSPPAG00000036314	SNRPB	99	98.253	Pan_paniscus
ENSSHAG00000010394	SNRPB	100	98.333	ENSPPRG00000003233	-	100	98.333	Panthera_pardus
ENSSHAG00000010394	SNRPB	99	98.326	ENSPTIG00000007468	SNRPB	99	98.326	Panthera_tigris_altaica
ENSSHAG00000010394	SNRPB	95	98.253	ENSPTRG00000013176	SNRPB	99	98.253	Pan_troglodytes
ENSSHAG00000010394	SNRPB	100	98.333	ENSPANG00000020362	SNRPB	100	98.333	Papio_anubis
ENSSHAG00000010394	SNRPB	70	92.857	ENSPKIG00000002865	snrpb	70	94.643	Paramormyrops_kingsleyae
ENSSHAG00000010394	SNRPB	99	97.490	ENSPSIG00000014125	SNRPB	98	97.490	Pelodiscus_sinensis
ENSSHAG00000010394	SNRPB	74	91.011	ENSPMGG00000016349	snrpb	69	92.638	Periophthalmus_magnuspinnatus
ENSSHAG00000010394	SNRPB	95	98.253	ENSPEMG00000007948	Snrpb	99	98.253	Peromyscus_maniculatus_bairdii
ENSSHAG00000010394	SNRPB	99	98.745	ENSPCIG00000004694	SNRPB	99	98.745	Phascolarctos_cinereus
ENSSHAG00000010394	SNRPB	95	98.253	ENSPPYG00000010841	SNRPB	99	98.253	Pongo_abelii
ENSSHAG00000010394	SNRPB	95	98.253	ENSPCOG00000013686	SNRPB	99	98.253	Propithecus_coquereli
ENSSHAG00000010394	SNRPB	95	96.916	ENSPVAG00000017013	SNRPB	80	96.916	Pteropus_vampyrus
ENSSHAG00000010394	SNRPB	75	93.370	ENSPNYG00000014788	snrpb	69	95.238	Pundamilia_nyererei
ENSSHAG00000010394	SNRPB	76	93.443	ENSPNAG00000016126	snrpb	70	95.238	Pygocentrus_nattereri
ENSSHAG00000010394	SNRPB	95	98.253	ENSRNOG00000006961	Snrpb	99	98.253	Rattus_norvegicus
ENSSHAG00000010394	SNRPB	100	97.917	ENSRBIG00000040505	SNRPB	100	97.917	Rhinopithecus_bieti
ENSSHAG00000010394	SNRPB	100	98.333	ENSRROG00000036094	SNRPB	100	98.333	Rhinopithecus_roxellana
ENSSHAG00000010394	SNRPB	100	98.333	ENSSBOG00000027310	SNRPB	100	98.333	Saimiri_boliviensis_boliviensis
ENSSHAG00000010394	SNRPB	70	92.857	ENSSFOG00015002870	snrpb	70	94.048	Scleropages_formosus
ENSSHAG00000010394	SNRPB	99	94.958	ENSSMAG00000006766	snrpb	99	94.958	Scophthalmus_maximus
ENSSHAG00000010394	SNRPB	75	93.370	ENSSDUG00000018539	snrpb	69	95.238	Seriola_dumerili
ENSSHAG00000010394	SNRPB	75	93.370	ENSSLDG00000022391	snrpb	69	95.238	Seriola_lalandi_dorsalis
ENSSHAG00000010394	SNRPB	72	84.302	ENSSARG00000003084	SNRPB	74	84.302	Sorex_araneus
ENSSHAG00000010394	SNRPB	99	97.490	ENSSPUG00000015659	SNRPB	100	97.490	Sphenodon_punctatus
ENSSHAG00000010394	SNRPB	75	93.370	ENSSPAG00000021992	snrpb	69	95.238	Stegastes_partitus
ENSSHAG00000010394	SNRPB	95	97.817	ENSSSCG00000040857	-	99	97.817	Sus_scrofa
ENSSHAG00000010394	SNRPB	95	78.166	ENSSSCG00000011966	-	77	73.224	Sus_scrofa
ENSSHAG00000010394	SNRPB	74	80.226	ENSTGUG00000005684	SNRPB	59	97.143	Taeniopygia_guttata
ENSSHAG00000010394	SNRPB	95	94.760	ENSTRUG00000023094	snrpb	99	94.760	Takifugu_rubripes
ENSSHAG00000010394	SNRPB	99	94.958	ENSTNIG00000002991	snrpb	99	94.958	Tetraodon_nigroviridis
ENSSHAG00000010394	SNRPB	72	99.422	ENSUAMG00000005984	-	83	99.422	Ursus_americanus
ENSSHAG00000010394	SNRPB	72	82.081	ENSUMAG00000002123	-	64	97.122	Ursus_maritimus
ENSSHAG00000010394	SNRPB	100	75.000	ENSVVUG00000010086	-	85	80.102	Vulpes_vulpes
ENSSHAG00000010394	SNRPB	100	97.917	ENSVVUG00000025654	-	100	97.917	Vulpes_vulpes
ENSSHAG00000010394	SNRPB	62	43.713	ENSVVUG00000018297	-	52	43.713	Vulpes_vulpes
ENSSHAG00000010394	SNRPB	92	95.928	ENSXETG00000027266	snrpb	93	95.928	Xenopus_tropicalis
ENSSHAG00000010394	SNRPB	93	66.368	ENSXMAG00000028767	snrpb	58	96.296	Xiphophorus_maculatus