EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000010443 (Gene tree)
Gene ID: 100930889
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 891 bases
Position: chrGL857013.1:687117-688007
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000012188	RNA_pol_L_2	PF13656.6	4.4e-18	1	1
ENSSHAP00000012188	RNA_pol_L	PF01193.24	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000012286	-	258	-	ENSSHAP00000012188	85 (aa)	-	G3W9T3

Gene Model

Click here to download ENSSHAG00000010443's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03020	RNA polymerase	KEGG
shr05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000010443's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000010443	-	81	100.000	ENSG00000005075	POLR2J	59	100.000	Homo_sapiens
ENSSHAG00000010443	-	69	100.000	ENSG00000228049	POLR2J2	53	95.082	Homo_sapiens
ENSSHAG00000010443	-	81	98.551	ENSAPOG00000019538	polr2j	59	98.551	Acanthochromis_polyacanthus
ENSSHAG00000010443	-	81	87.342	ENSAMEG00000015480	-	62	87.342	Ailuropoda_melanoleuca
ENSSHAG00000010443	-	81	97.101	ENSAOCG00000006937	polr2j	59	97.101	Amphiprion_ocellaris
ENSSHAG00000010443	-	81	98.551	ENSAPEG00000021761	polr2j	59	98.551	Amphiprion_percula
ENSSHAG00000010443	-	81	98.551	ENSATEG00000013312	-	59	98.551	Anabas_testudineus
ENSSHAG00000010443	-	81	98.551	ENSATEG00000009731	polr2j	59	98.551	Anabas_testudineus
ENSSHAG00000010443	-	81	100.000	ENSAPLG00000003744	-	68	100.000	Anas_platyrhynchos
ENSSHAG00000010443	-	81	91.304	ENSACAG00000000251	POLR2J	59	91.304	Anolis_carolinensis
ENSSHAG00000010443	-	81	98.551	ENSACLG00000014564	polr2j	59	98.551	Astatotilapia_calliptera
ENSSHAG00000010443	-	81	98.551	ENSAMXG00000007517	polr2j	59	98.551	Astyanax_mexicanus
ENSSHAG00000010443	-	73	69.355	WBGene00012187	rpb-11	51	69.355	Caenorhabditis_elegans
ENSSHAG00000010443	-	81	100.000	ENSCJAG00000016203	-	80	98.571	Callithrix_jacchus
ENSSHAG00000010443	-	81	100.000	ENSCAFG00000013683	-	59	100.000	Canis_familiaris
ENSSHAG00000010443	-	81	100.000	ENSTSYG00000029243	-	59	100.000	Carlito_syrichta
ENSSHAG00000010443	-	81	100.000	ENSCPOG00000001401	-	59	100.000	Cavia_porcellus
ENSSHAG00000010443	-	82	98.571	ENSCATG00000016595	-	80	98.571	Cercocebus_atys
ENSSHAG00000010443	-	81	100.000	ENSCLAG00000005238	-	59	100.000	Chinchilla_lanigera
ENSSHAG00000010443	-	81	100.000	ENSCSAG00000018092	-	59	100.000	Chlorocebus_sabaeus
ENSSHAG00000010443	-	81	82.609	ENSCING00000020531	-	59	82.609	Ciona_intestinalis
ENSSHAG00000010443	-	81	82.609	ENSCSAVG00000006948	-	59	82.609	Ciona_savignyi
ENSSHAG00000010443	-	81	100.000	ENSCGRG00001012814	Polr2j	80	98.571	Cricetulus_griseus_chok1gshd
ENSSHAG00000010443	-	81	73.913	ENSCGRG00000008433	Polr2j	58	73.913	Cricetulus_griseus_crigri
ENSSHAG00000010443	-	81	97.101	ENSCSEG00000020352	polr2j	59	97.101	Cynoglossus_semilaevis
ENSSHAG00000010443	-	81	97.101	ENSCVAG00000014267	polr2j	59	97.101	Cyprinodon_variegatus
ENSSHAG00000010443	-	81	97.101	ENSDARG00000035146	polr2j	59	97.101	Danio_rerio
ENSSHAG00000010443	-	81	100.000	ENSDORG00000005934	Polr2j	80	98.571	Dipodomys_ordii
ENSSHAG00000010443	-	80	79.412	FBgn0032634	Rpb11	58	79.412	Drosophila_melanogaster
ENSSHAG00000010443	-	82	82.857	ENSEBUG00000016100	polr2j	80	82.857	Eptatretus_burgeri
ENSSHAG00000010443	-	81	100.000	ENSEASG00005016864	-	59	100.000	Equus_asinus_asinus
ENSSHAG00000010443	-	82	97.143	ENSELUG00000012822	polr2j	60	97.143	Esox_lucius
ENSSHAG00000010443	-	81	100.000	ENSFCAG00000000377	-	59	100.000	Felis_catus
ENSSHAG00000010443	-	81	100.000	ENSFALG00000009523	POLR2J	59	100.000	Ficedula_albicollis
ENSSHAG00000010443	-	81	100.000	ENSFDAG00000010507	-	59	100.000	Fukomys_damarensis
ENSSHAG00000010443	-	81	98.551	ENSFHEG00000006625	polr2j	59	98.551	Fundulus_heteroclitus
ENSSHAG00000010443	-	81	97.101	ENSGMOG00000018207	polr2j	59	97.101	Gadus_morhua
ENSSHAG00000010443	-	81	100.000	ENSGALG00000030808	-	59	100.000	Gallus_gallus
ENSSHAG00000010443	-	81	98.551	ENSGAFG00000019555	polr2j	59	98.551	Gambusia_affinis
ENSSHAG00000010443	-	81	98.551	ENSGACG00000003310	polr2j	59	98.551	Gasterosteus_aculeatus
ENSSHAG00000010443	-	81	100.000	ENSGAGG00000018304	-	63	100.000	Gopherus_agassizii
ENSSHAG00000010443	-	81	94.203	ENSGGOG00000004519	-	55	94.203	Gorilla_gorilla
ENSSHAG00000010443	-	81	98.551	ENSHBUG00000008467	polr2j	59	98.551	Haplochromis_burtoni
ENSSHAG00000010443	-	81	100.000	ENSHGLG00000013598	POLR2J	80	98.571	Heterocephalus_glaber_female
ENSSHAG00000010443	-	81	100.000	ENSHGLG00100011242	POLR2J	80	98.571	Heterocephalus_glaber_male
ENSSHAG00000010443	-	81	98.551	ENSIPUG00000023960	polr2j	59	98.551	Ictalurus_punctatus
ENSSHAG00000010443	-	81	100.000	ENSSTOG00000006377	POLR2J	80	98.571	Ictidomys_tridecemlineatus
ENSSHAG00000010443	-	81	92.754	ENSJJAG00000018834	-	59	92.754	Jaculus_jaculus
ENSSHAG00000010443	-	81	100.000	ENSJJAG00000013854	-	80	98.571	Jaculus_jaculus
ENSSHAG00000010443	-	81	98.551	ENSLBEG00000005885	polr2j	59	98.551	Labrus_bergylta
ENSSHAG00000010443	-	81	98.551	ENSLOCG00000001885	polr2j	52	98.551	Lepisosteus_oculatus
ENSSHAG00000010443	-	81	100.000	ENSLAFG00000021507	-	59	100.000	Loxodonta_africana
ENSSHAG00000010443	-	82	98.571	ENSMMUG00000012019	POLR2J	80	98.571	Macaca_mulatta
ENSSHAG00000010443	-	81	98.551	ENSMAMG00000009374	polr2j	59	98.551	Mastacembelus_armatus
ENSSHAG00000010443	-	81	98.551	ENSMZEG00005011932	polr2j	59	98.551	Maylandia_zebra
ENSSHAG00000010443	-	81	100.000	ENSMGAG00000003534	POLR2J	59	100.000	Meleagris_gallopavo
ENSSHAG00000010443	-	81	100.000	ENSMAUG00000013049	Polr2j	80	98.571	Mesocricetus_auratus
ENSSHAG00000010443	-	71	96.667	ENSMICG00000026811	-	60	96.667	Microcebus_murinus
ENSSHAG00000010443	-	81	100.000	ENSMOCG00000001294	Polr2j	80	98.571	Microtus_ochrogaster
ENSSHAG00000010443	-	81	97.101	ENSMMOG00000013265	polr2j	59	97.101	Mola_mola
ENSSHAG00000010443	-	81	86.250	ENSMODG00000013617	-	63	86.250	Monodelphis_domestica
ENSSHAG00000010443	-	81	98.551	ENSMALG00000020749	polr2j	59	98.551	Monopterus_albus
ENSSHAG00000010443	-	81	100.000	MGP_CAROLIEiJ_G0027851	Polr2j	80	98.571	Mus_caroli
ENSSHAG00000010443	-	81	100.000	ENSMUSG00000039771	Polr2j	80	98.571	Mus_musculus
ENSSHAG00000010443	-	81	100.000	MGP_PahariEiJ_G0024434	Polr2j	80	98.571	Mus_pahari
ENSSHAG00000010443	-	81	100.000	MGP_SPRETEiJ_G0028853	Polr2j	80	98.571	Mus_spretus
ENSSHAG00000010443	-	81	100.000	ENSMLUG00000010467	POLR2J	59	100.000	Myotis_lucifugus
ENSSHAG00000010443	-	81	100.000	ENSNGAG00000023412	Polr2j	80	98.571	Nannospalax_galili
ENSSHAG00000010443	-	99	67.857	ENSODEG00000008559	-	78	67.857	Octodon_degus
ENSSHAG00000010443	-	81	100.000	ENSODEG00000015648	-	59	100.000	Octodon_degus
ENSSHAG00000010443	-	81	98.551	ENSONIG00000000259	polr2j	59	98.551	Oreochromis_niloticus
ENSSHAG00000010443	-	81	95.652	ENSOANG00000020912	POLR2J	59	95.652	Ornithorhynchus_anatinus
ENSSHAG00000010443	-	81	87.342	ENSOCUG00000023609	POLR2J	62	87.342	Oryctolagus_cuniculus
ENSSHAG00000010443	-	81	97.101	ENSOMEG00000002097	polr2j	59	97.101	Oryzias_melastigma
ENSSHAG00000010443	-	86	84.337	ENSOGAG00000008250	-	65	84.337	Otolemur_garnettii
ENSSHAG00000010443	-	81	100.000	ENSOARG00000014204	-	58	100.000	Ovis_aries
ENSSHAG00000010443	-	81	100.000	ENSPPRG00000012439	-	59	100.000	Panthera_pardus
ENSSHAG00000010443	-	81	100.000	ENSPTIG00000018714	-	67	100.000	Panthera_tigris_altaica
ENSSHAG00000010443	-	81	100.000	ENSPSIG00000010173	-	69	100.000	Pelodiscus_sinensis
ENSSHAG00000010443	-	81	98.551	ENSPMGG00000021256	polr2j	59	98.551	Periophthalmus_magnuspinnatus
ENSSHAG00000010443	-	81	100.000	ENSPEMG00000015733	Polr2j	80	98.571	Peromyscus_maniculatus_bairdii
ENSSHAG00000010443	-	81	100.000	ENSPCIG00000009026	-	59	100.000	Phascolarctos_cinereus
ENSSHAG00000010443	-	81	98.551	ENSPFOG00000012001	polr2j	58	98.551	Poecilia_formosa
ENSSHAG00000010443	-	81	98.551	ENSPLAG00000014075	polr2j	59	98.551	Poecilia_latipinna
ENSSHAG00000010443	-	81	98.551	ENSPMEG00000020585	polr2j	59	98.551	Poecilia_mexicana
ENSSHAG00000010443	-	81	98.551	ENSPREG00000015255	polr2j	59	98.551	Poecilia_reticulata
ENSSHAG00000010443	-	81	100.000	ENSPCOG00000024573	-	80	98.571	Propithecus_coquereli
ENSSHAG00000010443	-	81	98.551	ENSPNYG00000014832	polr2j	59	98.551	Pundamilia_nyererei
ENSSHAG00000010443	-	81	94.203	ENSPNAG00000016595	polr2j	59	94.203	Pygocentrus_nattereri
ENSSHAG00000010443	-	81	100.000	ENSRNOG00000001430	Polr2j	59	100.000	Rattus_norvegicus
ENSSHAG00000010443	-	81	100.000	ENSSBOG00000025579	-	80	98.571	Saimiri_boliviensis_boliviensis
ENSSHAG00000010443	-	81	98.551	ENSSMAG00000006729	polr2j	59	98.551	Scophthalmus_maximus
ENSSHAG00000010443	-	81	98.551	ENSSDUG00000018490	polr2j	59	98.551	Seriola_dumerili
ENSSHAG00000010443	-	81	98.551	ENSSLDG00000022354	polr2j	59	98.551	Seriola_lalandi_dorsalis
ENSSHAG00000010443	-	81	100.000	ENSSPUG00000010802	-	59	100.000	Sphenodon_punctatus
ENSSHAG00000010443	-	81	98.551	ENSSPAG00000021953	polr2j	59	98.551	Stegastes_partitus
ENSSHAG00000010443	-	81	100.000	ENSSSCG00000007688	-	59	100.000	Sus_scrofa
ENSSHAG00000010443	-	81	100.000	ENSTGUG00000004510	-	100	100.000	Taeniopygia_guttata
ENSSHAG00000010443	-	81	100.000	ENSTGUG00000004501	-	69	100.000	Taeniopygia_guttata
ENSSHAG00000010443	-	81	98.551	ENSTRUG00000020842	polr2j	59	98.551	Takifugu_rubripes
ENSSHAG00000010443	-	81	97.101	ENSTNIG00000002994	polr2j	59	97.101	Tetraodon_nigroviridis
ENSSHAG00000010443	-	81	100.000	ENSUAMG00000011310	-	59	100.000	Ursus_americanus
ENSSHAG00000010443	-	81	100.000	ENSUMAG00000012594	-	59	100.000	Ursus_maritimus
ENSSHAG00000010443	-	81	100.000	ENSXETG00000001108	polr2j	59	100.000	Xenopus_tropicalis
ENSSHAG00000010443	-	81	98.551	ENSXMAG00000012422	polr2j	59	98.551	Xiphophorus_maculatus