EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000010458 (Gene tree)
Gene ID: 100923113
Gene Symbol: CPSF2
Alias: CPSF100|KIAA1367
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 19972 bases
Position: chrGL834523.1:689486-709457
Accession: 100923113
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000012203	Beta-Casp	PF10996.8	2e-20	1	1
ENSSHAP00000012203	Lactamase_B	PF00753.27	1.1e-06	1	1
ENSSHAP00000012203	RMMBL	PF07521.12	8.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000012301	CPSF2-201	2349	-	ENSSHAP00000012203	782 (aa)	XP_003756188	G3W9U8

Gene Model

Click here to download ENSSHAG00000010458's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000010458's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000010458	CPSF2	100	98.977	ENSG00000165934	CPSF2	100	98.977	Homo_sapiens
ENSSHAG00000010458	CPSF2	100	86.058	ENSAPOG00000001242	cpsf2	100	86.058	Acanthochromis_polyacanthus
ENSSHAG00000010458	CPSF2	100	86.456	ENSACIG00000009331	cpsf2	100	86.456	Amphilophus_citrinellus
ENSSHAG00000010458	CPSF2	100	86.185	ENSAOCG00000014095	cpsf2	100	86.185	Amphiprion_ocellaris
ENSSHAG00000010458	CPSF2	100	86.185	ENSAPEG00000009158	cpsf2	100	86.185	Amphiprion_percula
ENSSHAG00000010458	CPSF2	96	86.447	ENSATEG00000017644	cpsf2	100	84.474	Anabas_testudineus
ENSSHAG00000010458	CPSF2	100	96.688	ENSAPLG00000006330	CPSF2	100	96.688	Anas_platyrhynchos
ENSSHAG00000010458	CPSF2	100	95.275	ENSACAG00000009245	CPSF2	100	95.275	Anolis_carolinensis
ENSSHAG00000010458	CPSF2	100	99.233	ENSANAG00000022915	CPSF2	100	99.233	Aotus_nancymaae
ENSSHAG00000010458	CPSF2	100	85.896	ENSAMXG00000018696	cpsf2	100	85.896	Astyanax_mexicanus
ENSSHAG00000010458	CPSF2	100	98.977	ENSBTAG00000010227	CPSF2	100	98.977	Bos_taurus
ENSSHAG00000010458	CPSF2	100	41.637	WBGene00017313	cpsf-2	100	41.101	Caenorhabditis_elegans
ENSSHAG00000010458	CPSF2	100	99.233	ENSCJAG00000018069	CPSF2	100	99.233	Callithrix_jacchus
ENSSHAG00000010458	CPSF2	100	99.105	ENSCAFG00000010909	CPSF2	100	99.105	Canis_familiaris
ENSSHAG00000010458	CPSF2	100	99.105	ENSCAFG00020020670	CPSF2	100	99.105	Canis_lupus_dingo
ENSSHAG00000010458	CPSF2	100	98.977	ENSCHIG00000023848	CPSF2	100	98.977	Capra_hircus
ENSSHAG00000010458	CPSF2	100	98.338	ENSTSYG00000009036	CPSF2	100	98.338	Carlito_syrichta
ENSSHAG00000010458	CPSF2	100	99.233	ENSCPOG00000010899	CPSF2	100	99.233	Cavia_porcellus
ENSSHAG00000010458	CPSF2	100	99.233	ENSCCAG00000028088	CPSF2	100	99.233	Cebus_capucinus
ENSSHAG00000010458	CPSF2	100	99.105	ENSCATG00000030132	CPSF2	100	99.105	Cercocebus_atys
ENSSHAG00000010458	CPSF2	100	99.105	ENSCLAG00000012404	CPSF2	100	99.105	Chinchilla_lanigera
ENSSHAG00000010458	CPSF2	100	99.105	ENSCSAG00000011300	CPSF2	100	99.105	Chlorocebus_sabaeus
ENSSHAG00000010458	CPSF2	100	92.072	ENSCHOG00000012904	CPSF2	100	92.072	Choloepus_hoffmanni
ENSSHAG00000010458	CPSF2	100	97.063	ENSCPBG00000008766	CPSF2	97	97.063	Chrysemys_picta_bellii
ENSSHAG00000010458	CPSF2	100	54.795	ENSCING00000007881	-	100	54.421	Ciona_intestinalis
ENSSHAG00000010458	CPSF2	94	99.044	ENSCANG00000041651	CPSF2	100	99.044	Colobus_angolensis_palliatus
ENSSHAG00000010458	CPSF2	100	98.465	ENSCGRG00001006901	Cpsf2	100	98.465	Cricetulus_griseus_chok1gshd
ENSSHAG00000010458	CPSF2	100	98.465	ENSCGRG00000012416	Cpsf2	100	98.465	Cricetulus_griseus_crigri
ENSSHAG00000010458	CPSF2	100	83.904	ENSCSEG00000004116	cpsf2	100	83.904	Cynoglossus_semilaevis
ENSSHAG00000010458	CPSF2	100	85.425	ENSCVAG00000000095	cpsf2	100	85.551	Cyprinodon_variegatus
ENSSHAG00000010458	CPSF2	100	85.696	ENSDARG00000028971	cpsf2	100	85.696	Danio_rerio
ENSSHAG00000010458	CPSF2	100	99.361	ENSDNOG00000042757	CPSF2	100	99.361	Dasypus_novemcinctus
ENSSHAG00000010458	CPSF2	100	98.849	ENSDORG00000013709	Cpsf2	100	98.849	Dipodomys_ordii
ENSSHAG00000010458	CPSF2	100	54.047	FBgn0027873	Cpsf100	100	53.933	Drosophila_melanogaster
ENSSHAG00000010458	CPSF2	100	89.911	ENSETEG00000012123	CPSF2	100	89.911	Echinops_telfairi
ENSSHAG00000010458	CPSF2	52	76.716	ENSEBUG00000012098	cpsf2	93	76.716	Eptatretus_burgeri
ENSSHAG00000010458	CPSF2	91	97.270	ENSEASG00005021193	CPSF2	100	97.270	Equus_asinus_asinus
ENSSHAG00000010458	CPSF2	100	98.977	ENSECAG00000023935	CPSF2	100	98.977	Equus_caballus
ENSSHAG00000010458	CPSF2	100	84.316	ENSELUG00000008442	cpsf2	100	84.316	Esox_lucius
ENSSHAG00000010458	CPSF2	100	98.977	ENSFCAG00000007886	CPSF2	100	98.977	Felis_catus
ENSSHAG00000010458	CPSF2	100	96.935	ENSFALG00000002412	CPSF2	100	96.935	Ficedula_albicollis
ENSSHAG00000010458	CPSF2	100	99.105	ENSFDAG00000006327	CPSF2	100	99.105	Fukomys_damarensis
ENSSHAG00000010458	CPSF2	96	84.706	ENSFHEG00000015465	cpsf2	98	84.967	Fundulus_heteroclitus
ENSSHAG00000010458	CPSF2	100	83.586	ENSGMOG00000008761	cpsf2	100	83.586	Gadus_morhua
ENSSHAG00000010458	CPSF2	100	96.041	ENSGALG00000010783	CPSF2	100	96.552	Gallus_gallus
ENSSHAG00000010458	CPSF2	100	85.678	ENSGAFG00000001407	cpsf2	100	85.678	Gambusia_affinis
ENSSHAG00000010458	CPSF2	100	84.664	ENSGACG00000008418	cpsf2	100	84.664	Gasterosteus_aculeatus
ENSSHAG00000010458	CPSF2	100	97.190	ENSGAGG00000008287	CPSF2	100	97.190	Gopherus_agassizii
ENSSHAG00000010458	CPSF2	100	98.977	ENSGGOG00000011799	CPSF2	100	98.977	Gorilla_gorilla
ENSSHAG00000010458	CPSF2	100	85.298	ENSHBUG00000023466	cpsf2	100	85.298	Haplochromis_burtoni
ENSSHAG00000010458	CPSF2	100	98.977	ENSHGLG00000018311	CPSF2	100	98.977	Heterocephalus_glaber_female
ENSSHAG00000010458	CPSF2	100	98.977	ENSHGLG00100016460	CPSF2	100	98.977	Heterocephalus_glaber_male
ENSSHAG00000010458	CPSF2	100	85.044	ENSHCOG00000019527	cpsf2	98	85.044	Hippocampus_comes
ENSSHAG00000010458	CPSF2	100	85.896	ENSIPUG00000020857	cpsf2	100	85.896	Ictalurus_punctatus
ENSSHAG00000010458	CPSF2	100	99.361	ENSSTOG00000009528	CPSF2	100	99.361	Ictidomys_tridecemlineatus
ENSSHAG00000010458	CPSF2	100	98.721	ENSJJAG00000017925	Cpsf2	100	98.721	Jaculus_jaculus
ENSSHAG00000010458	CPSF2	100	85.044	ENSKMAG00000019429	cpsf2	100	85.044	Kryptolebias_marmoratus
ENSSHAG00000010458	CPSF2	95	84.225	ENSLBEG00000011585	cpsf2	100	84.492	Labrus_bergylta
ENSSHAG00000010458	CPSF2	100	89.655	ENSLACG00000019024	CPSF2	100	90.166	Latimeria_chalumnae
ENSSHAG00000010458	CPSF2	100	87.706	ENSLOCG00000014102	cpsf2	100	87.706	Lepisosteus_oculatus
ENSSHAG00000010458	CPSF2	100	98.724	ENSLAFG00000004891	CPSF2	100	98.724	Loxodonta_africana
ENSSHAG00000010458	CPSF2	100	99.105	ENSMFAG00000041212	CPSF2	100	99.105	Macaca_fascicularis
ENSSHAG00000010458	CPSF2	100	99.105	ENSMMUG00000000699	CPSF2	100	99.105	Macaca_mulatta
ENSSHAG00000010458	CPSF2	100	99.105	ENSMNEG00000031584	CPSF2	100	99.105	Macaca_nemestrina
ENSSHAG00000010458	CPSF2	100	99.105	ENSMLEG00000029394	CPSF2	100	99.105	Mandrillus_leucophaeus
ENSSHAG00000010458	CPSF2	100	85.932	ENSMAMG00000004235	cpsf2	100	85.932	Mastacembelus_armatus
ENSSHAG00000010458	CPSF2	100	85.425	ENSMZEG00005001769	cpsf2	100	85.425	Maylandia_zebra
ENSSHAG00000010458	CPSF2	100	96.046	ENSMGAG00000013122	CPSF2	100	96.556	Meleagris_gallopavo
ENSSHAG00000010458	CPSF2	100	98.465	ENSMAUG00000015160	Cpsf2	100	98.465	Mesocricetus_auratus
ENSSHAG00000010458	CPSF2	100	99.233	ENSMICG00000016441	CPSF2	100	99.233	Microcebus_murinus
ENSSHAG00000010458	CPSF2	100	98.465	ENSMOCG00000015372	Cpsf2	100	98.465	Microtus_ochrogaster
ENSSHAG00000010458	CPSF2	100	81.496	ENSMMOG00000015590	cpsf2	100	81.496	Mola_mola
ENSSHAG00000010458	CPSF2	100	99.872	ENSMODG00000002042	CPSF2	100	99.872	Monodelphis_domestica
ENSSHAG00000010458	CPSF2	100	82.890	ENSMALG00000022275	cpsf2	100	82.890	Monopterus_albus
ENSSHAG00000010458	CPSF2	100	97.698	ENSMUSG00000041781	Cpsf2	100	97.698	Mus_musculus
ENSSHAG00000010458	CPSF2	100	97.954	MGP_PahariEiJ_G0029791	Cpsf2	100	97.954	Mus_pahari
ENSSHAG00000010458	CPSF2	100	97.698	MGP_SPRETEiJ_G0018877	Cpsf2	100	97.698	Mus_spretus
ENSSHAG00000010458	CPSF2	100	99.105	ENSMPUG00000007617	CPSF2	98	99.105	Mustela_putorius_furo
ENSSHAG00000010458	CPSF2	100	98.465	ENSMLUG00000005570	CPSF2	100	98.465	Myotis_lucifugus
ENSSHAG00000010458	CPSF2	100	98.721	ENSNGAG00000020312	Cpsf2	100	98.721	Nannospalax_galili
ENSSHAG00000010458	CPSF2	100	85.805	ENSNBRG00000022402	cpsf2	100	85.805	Neolamprologus_brichardi
ENSSHAG00000010458	CPSF2	100	98.082	ENSNLEG00000017132	CPSF2	100	98.082	Nomascus_leucogenys
ENSSHAG00000010458	CPSF2	91	100.000	ENSMEUG00000008138	CPSF2	91	100.000	Notamacropus_eugenii
ENSSHAG00000010458	CPSF2	94	91.257	ENSOPRG00000008484	-	100	91.257	Ochotona_princeps
ENSSHAG00000010458	CPSF2	100	99.105	ENSODEG00000008682	CPSF2	100	99.105	Octodon_degus
ENSSHAG00000010458	CPSF2	100	86.185	ENSONIG00000005901	cpsf2	100	86.185	Oreochromis_niloticus
ENSSHAG00000010458	CPSF2	100	98.721	ENSOANG00000003822	CPSF2	100	98.721	Ornithorhynchus_anatinus
ENSSHAG00000010458	CPSF2	100	98.721	ENSOCUG00000005713	CPSF2	100	98.721	Oryctolagus_cuniculus
ENSSHAG00000010458	CPSF2	100	80.228	ENSORLG00000011628	cpsf2	100	80.228	Oryzias_latipes
ENSSHAG00000010458	CPSF2	100	85.171	ENSORLG00020016980	cpsf2	100	85.171	Oryzias_latipes_hni
ENSSHAG00000010458	CPSF2	100	85.171	ENSORLG00015011910	cpsf2	100	85.171	Oryzias_latipes_hsok
ENSSHAG00000010458	CPSF2	100	84.411	ENSOMEG00000022876	cpsf2	100	84.411	Oryzias_melastigma
ENSSHAG00000010458	CPSF2	100	95.918	ENSOARG00000012889	CPSF2	100	95.918	Ovis_aries
ENSSHAG00000010458	CPSF2	100	98.977	ENSPPAG00000039666	CPSF2	100	98.977	Pan_paniscus
ENSSHAG00000010458	CPSF2	99	98.976	ENSPPRG00000010869	CPSF2	100	98.976	Panthera_pardus
ENSSHAG00000010458	CPSF2	100	98.977	ENSPTIG00000021202	CPSF2	100	98.977	Panthera_tigris_altaica
ENSSHAG00000010458	CPSF2	100	98.977	ENSPTRG00000006651	CPSF2	100	98.977	Pan_troglodytes
ENSSHAG00000010458	CPSF2	100	99.105	ENSPANG00000017417	CPSF2	100	99.105	Papio_anubis
ENSSHAG00000010458	CPSF2	100	81.957	ENSPKIG00000021453	cpsf2	100	81.957	Paramormyrops_kingsleyae
ENSSHAG00000010458	CPSF2	100	96.296	ENSPSIG00000006289	CPSF2	100	96.296	Pelodiscus_sinensis
ENSSHAG00000010458	CPSF2	76	79.402	ENSPMGG00000002511	cpsf2	100	79.734	Periophthalmus_magnuspinnatus
ENSSHAG00000010458	CPSF2	100	98.721	ENSPEMG00000007917	Cpsf2	100	98.721	Peromyscus_maniculatus_bairdii
ENSSHAG00000010458	CPSF2	100	74.210	ENSPMAG00000006205	cpsf2	100	74.210	Petromyzon_marinus
ENSSHAG00000010458	CPSF2	100	99.872	ENSPCIG00000011393	CPSF2	100	99.872	Phascolarctos_cinereus
ENSSHAG00000010458	CPSF2	100	85.551	ENSPFOG00000018648	cpsf2	100	85.551	Poecilia_formosa
ENSSHAG00000010458	CPSF2	100	85.551	ENSPLAG00000019199	cpsf2	99	85.551	Poecilia_latipinna
ENSSHAG00000010458	CPSF2	96	85.921	ENSPMEG00000012100	cpsf2	100	85.294	Poecilia_mexicana
ENSSHAG00000010458	CPSF2	100	85.425	ENSPREG00000008960	cpsf2	100	85.425	Poecilia_reticulata
ENSSHAG00000010458	CPSF2	63	98.589	ENSPPYG00000029685	-	100	98.589	Pongo_abelii
ENSSHAG00000010458	CPSF2	100	98.593	ENSPCAG00000012477	CPSF2	100	98.593	Procavia_capensis
ENSSHAG00000010458	CPSF2	100	98.977	ENSPCOG00000026387	CPSF2	100	98.977	Propithecus_coquereli
ENSSHAG00000010458	CPSF2	65	99.490	ENSPVAG00000004223	CPSF2	65	99.490	Pteropus_vampyrus
ENSSHAG00000010458	CPSF2	100	85.443	ENSPNYG00000023356	cpsf2	100	85.443	Pundamilia_nyererei
ENSSHAG00000010458	CPSF2	100	87.039	ENSPNAG00000001849	cpsf2	100	87.039	Pygocentrus_nattereri
ENSSHAG00000010458	CPSF2	100	98.082	ENSRNOG00000005733	Cpsf2	100	98.082	Rattus_norvegicus
ENSSHAG00000010458	CPSF2	100	99.105	ENSRBIG00000044792	CPSF2	100	99.105	Rhinopithecus_bieti
ENSSHAG00000010458	CPSF2	100	99.105	ENSRROG00000034875	CPSF2	100	99.105	Rhinopithecus_roxellana
ENSSHAG00000010458	CPSF2	100	99.233	ENSSBOG00000024571	CPSF2	100	99.233	Saimiri_boliviensis_boliviensis
ENSSHAG00000010458	CPSF2	100	87.421	ENSSFOG00015002117	cpsf2	100	87.421	Scleropages_formosus
ENSSHAG00000010458	CPSF2	100	84.411	ENSSMAG00000002001	cpsf2	100	84.411	Scophthalmus_maximus
ENSSHAG00000010458	CPSF2	100	86.312	ENSSDUG00000004084	cpsf2	100	86.312	Seriola_dumerili
ENSSHAG00000010458	CPSF2	100	85.805	ENSSLDG00000024330	cpsf2	100	85.805	Seriola_lalandi_dorsalis
ENSSHAG00000010458	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSSHAG00000010458	CPSF2	100	96.424	ENSSPUG00000013485	CPSF2	100	96.424	Sphenodon_punctatus
ENSSHAG00000010458	CPSF2	100	85.425	ENSSPAG00000013284	cpsf2	100	85.425	Stegastes_partitus
ENSSHAG00000010458	CPSF2	100	98.977	ENSSSCG00000002447	CPSF2	100	98.977	Sus_scrofa
ENSSHAG00000010458	CPSF2	100	97.063	ENSTGUG00000012571	-	100	97.063	Taeniopygia_guttata
ENSSHAG00000010458	CPSF2	100	84.791	ENSTRUG00000003742	cpsf2	100	84.791	Takifugu_rubripes
ENSSHAG00000010458	CPSF2	100	83.565	ENSTNIG00000012228	cpsf2	100	84.324	Tetraodon_nigroviridis
ENSSHAG00000010458	CPSF2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSSHAG00000010458	CPSF2	88	100.000	ENSTTRG00000008697	CPSF2	88	100.000	Tursiops_truncatus
ENSSHAG00000010458	CPSF2	100	99.233	ENSUAMG00000028071	CPSF2	100	99.233	Ursus_americanus
ENSSHAG00000010458	CPSF2	100	99.233	ENSUMAG00000005029	CPSF2	100	99.233	Ursus_maritimus
ENSSHAG00000010458	CPSF2	99	99.104	ENSVPAG00000003503	CPSF2	100	99.104	Vicugna_pacos
ENSSHAG00000010458	CPSF2	100	99.105	ENSVVUG00000024642	CPSF2	100	99.105	Vulpes_vulpes
ENSSHAG00000010458	CPSF2	100	92.593	ENSXETG00000010289	cpsf2	100	92.593	Xenopus_tropicalis
ENSSHAG00000010458	CPSF2	100	85.932	ENSXCOG00000001764	cpsf2	100	85.932	Xiphophorus_couchianus
ENSSHAG00000010458	CPSF2	100	86.058	ENSXMAG00000017048	cpsf2	100	86.058	Xiphophorus_maculatus