EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000010459 (Gene tree)
Gene ID: 100925707
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 2941 bases
Position: chrGL856846.1:689573-692513
Accession: 19071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000012204	RRM_1	PF00076.22	5.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000012302	ALYREF-201	702	-	ENSSHAP00000012204	193 (aa)	-	G3W9U9

Gene Model

Click here to download ENSSHAG00000010459's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03013	RNA transport	KEGG
shr03015	mRNA surveillance pathway	KEGG
shr03040	Spliceosome	KEGG
shr05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000010459's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000010459	ALYREF	95	70.430	ENSSHAG00000012866	-	74	62.694
ENSSHAG00000010459	ALYREF	97	72.872	ENSSHAG00000000609	-	83	64.211

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000010459	ALYREF	95	94.565	ENSG00000183684	ALYREF	73	92.746	Homo_sapiens
ENSSHAG00000010459	ALYREF	95	72.222	ENSAPOG00000018455	ALYREF	73	75.377	Acanthochromis_polyacanthus
ENSSHAG00000010459	ALYREF	93	96.089	ENSAMEG00000017463	ALYREF	72	96.089	Ailuropoda_melanoleuca
ENSSHAG00000010459	ALYREF	98	84.211	ENSACAG00000010526	ALYREF	74	83.684	Anolis_carolinensis
ENSSHAG00000010459	ALYREF	92	96.045	ENSANAG00000022638	-	75	96.045	Aotus_nancymaae
ENSSHAG00000010459	ALYREF	93	83.799	ENSANAG00000028229	-	58	78.771	Aotus_nancymaae
ENSSHAG00000010459	ALYREF	95	95.652	ENSBTAG00000008498	ALYREF	75	93.782	Bos_taurus
ENSSHAG00000010459	ALYREF	95	94.565	ENSCJAG00000039942	ALYREF	73	92.746	Callithrix_jacchus
ENSSHAG00000010459	ALYREF	95	95.652	ENSCAFG00000005877	ALYREF	75	93.782	Canis_familiaris
ENSSHAG00000010459	ALYREF	95	95.652	ENSCAFG00020009815	ALYREF	75	93.782	Canis_lupus_dingo
ENSSHAG00000010459	ALYREF	95	94.595	ENSCHIG00000017396	ALYREF	72	92.784	Capra_hircus
ENSSHAG00000010459	ALYREF	91	98.286	ENSTSYG00000002272	ALYREF	69	98.286	Carlito_syrichta
ENSSHAG00000010459	ALYREF	69	97.015	ENSCAPG00000014727	-	100	97.015	Cavia_aperea
ENSSHAG00000010459	ALYREF	96	94.054	ENSCPOG00000013710	ALYREF	82	84.974	Cavia_porcellus
ENSSHAG00000010459	ALYREF	100	92.228	ENSCCAG00000020578	-	73	92.228	Cebus_capucinus
ENSSHAG00000010459	ALYREF	98	79.474	ENSCCAG00000030237	-	83	78.421	Cebus_capucinus
ENSSHAG00000010459	ALYREF	95	95.109	ENSCATG00000033169	ALYREF	73	93.264	Cercocebus_atys
ENSSHAG00000010459	ALYREF	92	97.753	ENSCLAG00000015026	ALYREF	75	97.753	Chinchilla_lanigera
ENSSHAG00000010459	ALYREF	95	95.109	ENSCSAG00000002216	ALYREF	73	93.264	Chlorocebus_sabaeus
ENSSHAG00000010459	ALYREF	98	91.146	ENSCANG00000034056	ALYREF	89	91.477	Colobus_angolensis_palliatus
ENSSHAG00000010459	ALYREF	100	90.674	ENSCGRG00001018191	-	83	85.492	Cricetulus_griseus_chok1gshd
ENSSHAG00000010459	ALYREF	99	91.667	ENSCGRG00000015871	-	94	83.077	Cricetulus_griseus_crigri
ENSSHAG00000010459	ALYREF	59	63.115	ENSCSEG00000015438	-	66	64.754	Cynoglossus_semilaevis
ENSSHAG00000010459	ALYREF	92	95.506	ENSDNOG00000002563	ALYREF	81	89.637	Dasypus_novemcinctus
ENSSHAG00000010459	ALYREF	93	96.089	ENSDORG00000025849	-	73	96.089	Dipodomys_ordii
ENSSHAG00000010459	ALYREF	92	94.382	ENSETEG00000016596	ALYREF	100	92.697	Echinops_telfairi
ENSSHAG00000010459	ALYREF	95	95.109	ENSEASG00005005824	ALYREF	71	93.264	Equus_asinus_asinus
ENSSHAG00000010459	ALYREF	95	95.109	ENSECAG00000018754	ALYREF	71	93.264	Equus_caballus
ENSSHAG00000010459	ALYREF	51	94.949	ENSEEUG00000010164	ALYREF	63	91.667	Erinaceus_europaeus
ENSSHAG00000010459	ALYREF	95	95.652	ENSFCAG00000022549	ALYREF	73	93.782	Felis_catus
ENSSHAG00000010459	ALYREF	95	96.721	ENSFDAG00000001213	ALYREF	81	96.023	Fukomys_damarensis
ENSSHAG00000010459	ALYREF	98	90.526	ENSGALG00000007237	ALYREF	75	90.526	Gallus_gallus
ENSSHAG00000010459	ALYREF	96	76.471	ENSGACG00000013328	ALYREF	72	75.936	Gasterosteus_aculeatus
ENSSHAG00000010459	ALYREF	98	90.052	ENSGAGG00000008536	ALYREF	74	90.052	Gopherus_agassizii
ENSSHAG00000010459	ALYREF	95	95.109	ENSGGOG00000013935	ALYREF	75	92.268	Gorilla_gorilla
ENSSHAG00000010459	ALYREF	96	92.973	ENSHGLG00000008293	ALYREF	75	91.099	Heterocephalus_glaber_female
ENSSHAG00000010459	ALYREF	95	95.082	ENSHGLG00100006949	ALYREF	78	95.082	Heterocephalus_glaber_male
ENSSHAG00000010459	ALYREF	95	73.196	ENSHCOG00000015046	ALYREF	73	73.711	Hippocampus_comes
ENSSHAG00000010459	ALYREF	95	91.304	ENSJJAG00000004134	-	75	89.119	Jaculus_jaculus
ENSSHAG00000010459	ALYREF	96	76.842	ENSLACG00000005694	ALYREF	74	78.947	Latimeria_chalumnae
ENSSHAG00000010459	ALYREF	96	91.892	ENSLAFG00000003083	ALYREF	98	89.189	Loxodonta_africana
ENSSHAG00000010459	ALYREF	95	95.109	ENSMFAG00000001394	ALYREF	75	93.264	Macaca_fascicularis
ENSSHAG00000010459	ALYREF	95	95.109	ENSMMUG00000012884	ALYREF	73	93.264	Macaca_mulatta
ENSSHAG00000010459	ALYREF	95	95.109	ENSMNEG00000043666	ALYREF	73	93.264	Macaca_nemestrina
ENSSHAG00000010459	ALYREF	93	91.061	ENSMLEG00000043353	ALYREF	82	91.061	Mandrillus_leucophaeus
ENSSHAG00000010459	ALYREF	95	95.082	ENSMAUG00000020552	-	87	88.268	Mesocricetus_auratus
ENSSHAG00000010459	ALYREF	95	95.109	ENSMICG00000017403	ALYREF	73	90.155	Microcebus_murinus
ENSSHAG00000010459	ALYREF	93	96.648	ENSMOCG00000016792	-	83	85.946	Microtus_ochrogaster
ENSSHAG00000010459	ALYREF	95	95.652	ENSMODG00000003030	ALYREF	62	94.271	Monodelphis_domestica
ENSSHAG00000010459	ALYREF	95	75.758	ENSMALG00000019408	ALYREF	74	75.758	Monopterus_albus
ENSSHAG00000010459	ALYREF	96	94.054	MGP_CAROLIEiJ_G0017529	Alyref	75	89.005	Mus_caroli
ENSSHAG00000010459	ALYREF	98	77.895	MGP_CAROLIEiJ_G0014874	Alyref2	83	75.789	Mus_caroli
ENSSHAG00000010459	ALYREF	95	67.453	ENSMUSG00000097550	Gm21304	83	59.174	Mus_musculus
ENSSHAG00000010459	ALYREF	93	70.213	ENSMUSG00000086727	4931428L18Rik	83	65.000	Mus_musculus
ENSSHAG00000010459	ALYREF	95	67.453	ENSMUSG00000094144	Gm21312	83	59.174	Mus_musculus
ENSSHAG00000010459	ALYREF	93	69.149	ENSMUSG00000117091	AC153137.1	77	66.667	Mus_musculus
ENSSHAG00000010459	ALYREF	98	81.675	ENSMUSG00000060244	Alyref2	83	74.211	Mus_musculus
ENSSHAG00000010459	ALYREF	95	67.453	ENSMUSG00000097427	Gm6763	67	76.000	Mus_musculus
ENSSHAG00000010459	ALYREF	95	67.453	ENSMUSG00000097878	Gm8764	67	76.000	Mus_musculus
ENSSHAG00000010459	ALYREF	95	67.453	ENSMUSG00000091779	Gm21293	83	59.174	Mus_musculus
ENSSHAG00000010459	ALYREF	95	66.204	ENSMUSG00000090854	Gm4340	83	56.306	Mus_musculus
ENSSHAG00000010459	ALYREF	95	67.453	ENSMUSG00000095022	Gm20765	83	59.174	Mus_musculus
ENSSHAG00000010459	ALYREF	96	94.054	ENSMUSG00000025134	Alyref	75	89.005	Mus_musculus
ENSSHAG00000010459	ALYREF	63	95.041	MGP_PahariEiJ_G0018656	-	67	92.126	Mus_pahari
ENSSHAG00000010459	ALYREF	96	94.054	MGP_PahariEiJ_G0018655	-	75	89.005	Mus_pahari
ENSSHAG00000010459	ALYREF	68	83.969	MGP_PahariEiJ_G0027254	-	55	84.298	Mus_pahari
ENSSHAG00000010459	ALYREF	68	83.969	MGP_PahariEiJ_G0027255	-	54	84.298	Mus_pahari
ENSSHAG00000010459	ALYREF	92	57.709	MGP_SPRETEiJ_G0016590	-	54	77.049	Mus_spretus
ENSSHAG00000010459	ALYREF	98	80.628	MGP_SPRETEiJ_G0015679	Alyref2	83	73.158	Mus_spretus
ENSSHAG00000010459	ALYREF	96	94.054	MGP_SPRETEiJ_G0018373	Alyref	75	89.005	Mus_spretus
ENSSHAG00000010459	ALYREF	97	68.984	ENSMLUG00000026271	-	64	66.310	Myotis_lucifugus
ENSSHAG00000010459	ALYREF	97	68.617	ENSMLUG00000024976	-	64	65.957	Myotis_lucifugus
ENSSHAG00000010459	ALYREF	93	63.043	ENSMLUG00000022869	-	65	64.674	Myotis_lucifugus
ENSSHAG00000010459	ALYREF	89	67.816	ENSMLUG00000028343	-	83	68.966	Myotis_lucifugus
ENSSHAG00000010459	ALYREF	97	71.809	ENSMLUG00000027516	-	63	72.340	Myotis_lucifugus
ENSSHAG00000010459	ALYREF	92	95.506	ENSMLUG00000009555	-	66	95.506	Myotis_lucifugus
ENSSHAG00000010459	ALYREF	97	67.539	ENSMLUG00000025677	-	63	68.063	Myotis_lucifugus
ENSSHAG00000010459	ALYREF	97	65.969	ENSMLUG00000030407	-	63	67.016	Myotis_lucifugus
ENSSHAG00000010459	ALYREF	92	56.216	ENSMLUG00000023213	-	70	54.891	Myotis_lucifugus
ENSSHAG00000010459	ALYREF	97	67.021	ENSMLUG00000024447	-	63	64.362	Myotis_lucifugus
ENSSHAG00000010459	ALYREF	93	60.753	ENSMLUG00000015043	-	78	61.290	Myotis_lucifugus
ENSSHAG00000010459	ALYREF	97	69.149	ENSMLUG00000027352	-	63	66.489	Myotis_lucifugus
ENSSHAG00000010459	ALYREF	93	60.106	ENSMLUG00000024471	-	65	60.106	Myotis_lucifugus
ENSSHAG00000010459	ALYREF	97	65.625	ENSMLUG00000002626	-	75	66.667	Myotis_lucifugus
ENSSHAG00000010459	ALYREF	95	95.109	ENSNLEG00000010313	ALYREF	73	93.264	Nomascus_leucogenys
ENSSHAG00000010459	ALYREF	69	97.761	ENSMEUG00000002210	ALYREF	59	97.761	Notamacropus_eugenii
ENSSHAG00000010459	ALYREF	69	91.791	ENSOPRG00000005551	-	52	88.806	Ochotona_princeps
ENSSHAG00000010459	ALYREF	95	93.583	ENSODEG00000008359	ALYREF	75	91.837	Octodon_degus
ENSSHAG00000010459	ALYREF	96	73.469	ENSORLG00000012331	ALYREF	75	74.346	Oryzias_latipes
ENSSHAG00000010459	ALYREF	100	90.722	ENSOGAG00000012409	ALYREF	82	88.660	Otolemur_garnettii
ENSSHAG00000010459	ALYREF	92	98.315	ENSOARG00000017932	ALYREF	67	98.315	Ovis_aries
ENSSHAG00000010459	ALYREF	95	95.652	ENSPPRG00000010829	ALYREF	73	93.782	Panthera_pardus
ENSSHAG00000010459	ALYREF	79	95.513	ENSPTIG00000006399	ALYREF	81	98.621	Panthera_tigris_altaica
ENSSHAG00000010459	ALYREF	95	95.109	ENSPTRG00000009774	ALYREF	73	93.264	Pan_troglodytes
ENSSHAG00000010459	ALYREF	95	95.109	ENSPANG00000019265	ALYREF	73	93.264	Papio_anubis
ENSSHAG00000010459	ALYREF	68	92.481	ENSPSIG00000017541	ALYREF	98	93.233	Pelodiscus_sinensis
ENSSHAG00000010459	ALYREF	95	95.109	ENSPPYG00000008749	ALYREF	73	93.264	Pongo_abelii
ENSSHAG00000010459	ALYREF	95	95.109	ENSPCOG00000020874	ALYREF	73	90.155	Propithecus_coquereli
ENSSHAG00000010459	ALYREF	92	96.629	ENSPVAG00000017866	ALYREF	69	96.629	Pteropus_vampyrus
ENSSHAG00000010459	ALYREF	99	90.256	ENSRBIG00000039651	ALYREF	79	90.256	Rhinopithecus_bieti
ENSSHAG00000010459	ALYREF	99	90.306	ENSRROG00000045364	ALYREF	81	90.306	Rhinopithecus_roxellana
ENSSHAG00000010459	ALYREF	93	59.000	ENSSDUG00000003992	-	75	59.500	Seriola_dumerili
ENSSHAG00000010459	ALYREF	93	60.406	ENSSLDG00000005386	-	75	60.406	Seriola_lalandi_dorsalis
ENSSHAG00000010459	ALYREF	98	88.947	ENSSPUG00000004600	ALYREF	74	88.947	Sphenodon_punctatus
ENSSHAG00000010459	ALYREF	95	72.864	ENSSPAG00000011178	ALYREF	71	73.000	Stegastes_partitus
ENSSHAG00000010459	ALYREF	96	95.135	ENSSSCG00000032655	ALYREF	75	93.194	Sus_scrofa
ENSSHAG00000010459	ALYREF	68	93.182	ENSTGUG00000003513	ALYREF	100	91.111	Taeniopygia_guttata
ENSSHAG00000010459	ALYREF	96	75.385	ENSTRUG00000008828	ALYREF	73	73.711	Takifugu_rubripes
ENSSHAG00000010459	ALYREF	92	97.753	ENSTBEG00000005834	ALYREF	100	97.753	Tupaia_belangeri
ENSSHAG00000010459	ALYREF	95	93.478	ENSTTRG00000012275	ALYREF	75	91.710	Tursiops_truncatus
ENSSHAG00000010459	ALYREF	93	83.333	ENSUAMG00000016931	ALYREF	67	80.556	Ursus_americanus
ENSSHAG00000010459	ALYREF	93	83.333	ENSUMAG00000016384	ALYREF	66	80.556	Ursus_maritimus
ENSSHAG00000010459	ALYREF	98	85.340	ENSXETG00000005391	alyref	80	83.069	Xenopus_tropicalis