EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000010790 (Gene tree)
Gene ID: 100923800
Gene Symbol: XRCC6
Alias: D22S671|D22S731|G22P1|KU70|ML8
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 16090 bases
Position: chrGL861723.1:747978-764067
Accession: 100923800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000012609	SAP	PF02037.27	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000012713	XRCC6-201	1846	-	ENSSHAP00000012609	610 (aa)	XP_003772300	G3WB04

Gene Model

Click here to download ENSSHAG00000010790's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000010790's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000010790	XRCC6	99	77.833	ENSG00000196419	XRCC6	99	78.161	Homo_sapiens
ENSSHAG00000010790	XRCC6	99	56.250	ENSAPOG00000012704	xrcc6	99	56.250	Acanthochromis_polyacanthus
ENSSHAG00000010790	XRCC6	99	56.250	ENSACIG00000021277	xrcc6	99	56.414	Amphilophus_citrinellus
ENSSHAG00000010790	XRCC6	99	56.322	ENSAOCG00000021344	xrcc6	99	55.665	Amphiprion_ocellaris
ENSSHAG00000010790	XRCC6	99	56.650	ENSAPEG00000020712	xrcc6	99	55.993	Amphiprion_percula
ENSSHAG00000010790	XRCC6	99	56.343	ENSATEG00000007119	xrcc6	99	56.507	Anabas_testudineus
ENSSHAG00000010790	XRCC6	90	68.978	ENSAPLG00000004469	XRCC6	99	68.978	Anas_platyrhynchos
ENSSHAG00000010790	XRCC6	99	69.408	ENSANAG00000020017	-	99	69.243	Aotus_nancymaae
ENSSHAG00000010790	XRCC6	99	68.473	ENSANAG00000035230	-	99	68.309	Aotus_nancymaae
ENSSHAG00000010790	XRCC6	99	67.377	ENSANAG00000023445	-	99	67.049	Aotus_nancymaae
ENSSHAG00000010790	XRCC6	99	78.325	ENSANAG00000018684	XRCC6	99	78.899	Aotus_nancymaae
ENSSHAG00000010790	XRCC6	99	56.579	ENSACLG00000018608	xrcc6	99	56.743	Astatotilapia_calliptera
ENSSHAG00000010790	XRCC6	99	58.292	ENSAMXG00000007545	xrcc6	99	57.964	Astyanax_mexicanus
ENSSHAG00000010790	XRCC6	99	78.325	ENSCJAG00000045512	XRCC6	99	77.997	Callithrix_jacchus
ENSSHAG00000010790	XRCC6	99	79.672	ENSTSYG00000011348	XRCC6	99	79.180	Carlito_syrichta
ENSSHAG00000010790	XRCC6	99	62.726	ENSCCAG00000035711	-	99	62.562	Cebus_capucinus
ENSSHAG00000010790	XRCC6	99	64.145	ENSCCAG00000037663	-	97	63.980	Cebus_capucinus
ENSSHAG00000010790	XRCC6	88	78.505	ENSCCAG00000030468	-	99	78.505	Cebus_capucinus
ENSSHAG00000010790	XRCC6	99	74.384	ENSCCAG00000030041	-	95	74.056	Cebus_capucinus
ENSSHAG00000010790	XRCC6	99	77.833	ENSCATG00000042366	XRCC6	99	78.161	Cercocebus_atys
ENSSHAG00000010790	XRCC6	99	79.803	ENSCLAG00000016669	XRCC6	99	79.803	Chinchilla_lanigera
ENSSHAG00000010790	XRCC6	99	77.833	ENSCSAG00000005784	XRCC6	99	78.161	Chlorocebus_sabaeus
ENSSHAG00000010790	XRCC6	99	72.951	ENSCPBG00000020535	XRCC6	99	72.951	Chrysemys_picta_bellii
ENSSHAG00000010790	XRCC6	99	32.951	ENSCING00000000633	-	96	33.390	Ciona_intestinalis
ENSSHAG00000010790	XRCC6	99	77.833	ENSCANG00000031032	XRCC6	99	78.161	Colobus_angolensis_palliatus
ENSSHAG00000010790	XRCC6	99	71.757	ENSCGRG00001019029	Xrcc6	99	71.429	Cricetulus_griseus_chok1gshd
ENSSHAG00000010790	XRCC6	99	78.654	ENSCGRG00000001528	Xrcc6	99	78.654	Cricetulus_griseus_crigri
ENSSHAG00000010790	XRCC6	99	55.556	ENSCSEG00000020434	xrcc6	99	55.719	Cynoglossus_semilaevis
ENSSHAG00000010790	XRCC6	99	57.026	ENSCVAG00000002189	xrcc6	99	57.026	Cyprinodon_variegatus
ENSSHAG00000010790	XRCC6	99	57.561	ENSDARG00000071551	xrcc6	100	57.561	Danio_rerio
ENSSHAG00000010790	XRCC6	78	68.932	ENSETEG00000015333	-	78	69.231	Echinops_telfairi
ENSSHAG00000010790	XRCC6	99	80.131	ENSEASG00005001514	XRCC6	99	80.131	Equus_asinus_asinus
ENSSHAG00000010790	XRCC6	99	79.803	ENSECAG00000017563	XRCC6	99	79.396	Equus_caballus
ENSSHAG00000010790	XRCC6	99	54.575	ENSELUG00000020301	xrcc6	99	54.575	Esox_lucius
ENSSHAG00000010790	XRCC6	99	67.921	ENSFALG00000011908	XRCC6	97	68.085	Ficedula_albicollis
ENSSHAG00000010790	XRCC6	99	57.680	ENSFHEG00000016833	xrcc6	99	57.680	Fundulus_heteroclitus
ENSSHAG00000010790	XRCC6	99	48.604	ENSGMOG00000013524	xrcc6	99	48.604	Gadus_morhua
ENSSHAG00000010790	XRCC6	99	68.627	ENSGALG00000011932	XRCC6	99	68.627	Gallus_gallus
ENSSHAG00000010790	XRCC6	99	55.392	ENSGAFG00000008130	xrcc6	99	55.392	Gambusia_affinis
ENSSHAG00000010790	XRCC6	99	53.809	ENSGACG00000004868	xrcc6	99	53.809	Gasterosteus_aculeatus
ENSSHAG00000010790	XRCC6	99	71.967	ENSGAGG00000017518	XRCC6	99	71.967	Gopherus_agassizii
ENSSHAG00000010790	XRCC6	99	77.997	ENSGGOG00000015885	XRCC6	99	78.325	Gorilla_gorilla
ENSSHAG00000010790	XRCC6	91	57.295	ENSHBUG00000023281	xrcc6	99	57.295	Haplochromis_burtoni
ENSSHAG00000010790	XRCC6	99	78.654	ENSHGLG00000018078	XRCC6	99	78.325	Heterocephalus_glaber_female
ENSSHAG00000010790	XRCC6	99	78.654	ENSHGLG00100011264	XRCC6	99	78.325	Heterocephalus_glaber_male
ENSSHAG00000010790	XRCC6	99	54.605	ENSHCOG00000009821	xrcc6	99	54.112	Hippocampus_comes
ENSSHAG00000010790	XRCC6	96	56.293	ENSIPUG00000000767	xrcc6	96	56.293	Ictalurus_punctatus
ENSSHAG00000010790	XRCC6	99	81.117	ENSSTOG00000009490	XRCC6	99	81.117	Ictidomys_tridecemlineatus
ENSSHAG00000010790	XRCC6	99	71.757	ENSJJAG00000017136	Xrcc6	99	72.414	Jaculus_jaculus
ENSSHAG00000010790	XRCC6	99	56.158	ENSKMAG00000002141	xrcc6	99	56.158	Kryptolebias_marmoratus
ENSSHAG00000010790	XRCC6	99	56.209	ENSLBEG00000002691	xrcc6	99	56.209	Labrus_bergylta
ENSSHAG00000010790	XRCC6	90	63.725	ENSLOCG00000011533	xrcc6	99	63.725	Lepisosteus_oculatus
ENSSHAG00000010790	XRCC6	99	77.833	ENSMFAG00000003352	XRCC6	99	78.161	Macaca_fascicularis
ENSSHAG00000010790	XRCC6	99	77.833	ENSMMUG00000001856	XRCC6	99	78.161	Macaca_mulatta
ENSSHAG00000010790	XRCC6	99	77.833	ENSMNEG00000035076	XRCC6	99	78.161	Macaca_nemestrina
ENSSHAG00000010790	XRCC6	99	77.833	ENSMLEG00000019869	XRCC6	99	78.161	Mandrillus_leucophaeus
ENSSHAG00000010790	XRCC6	95	55.308	ENSMAMG00000003405	xrcc6	96	55.308	Mastacembelus_armatus
ENSSHAG00000010790	XRCC6	99	55.082	ENSMAMG00000003368	xrcc6	99	55.082	Mastacembelus_armatus
ENSSHAG00000010790	XRCC6	99	56.086	ENSMZEG00005028080	xrcc6	99	56.250	Maylandia_zebra
ENSSHAG00000010790	XRCC6	99	68.137	ENSMGAG00000012146	XRCC6	99	67.915	Meleagris_gallopavo
ENSSHAG00000010790	XRCC6	99	78.325	ENSMAUG00000017340	Xrcc6	100	78.325	Mesocricetus_auratus
ENSSHAG00000010790	XRCC6	99	78.489	ENSMOCG00000015717	Xrcc6	100	78.161	Microtus_ochrogaster
ENSSHAG00000010790	XRCC6	99	54.516	ENSMMOG00000003536	xrcc6	99	54.351	Mola_mola
ENSSHAG00000010790	XRCC6	99	57.401	ENSMALG00000013912	xrcc6	94	57.566	Monopterus_albus
ENSSHAG00000010790	XRCC6	99	72.414	MGP_CAROLIEiJ_G0020067	Xrcc6	99	72.414	Mus_caroli
ENSSHAG00000010790	XRCC6	99	77.668	ENSMUSG00000022471	Xrcc6	99	77.340	Mus_musculus
ENSSHAG00000010790	XRCC6	99	76.190	MGP_PahariEiJ_G0020069	Xrcc6	99	76.190	Mus_pahari
ENSSHAG00000010790	XRCC6	96	77.419	MGP_SPRETEiJ_G0020967	Xrcc6	99	78.007	Mus_spretus
ENSSHAG00000010790	XRCC6	99	78.818	ENSNGAG00000013750	Xrcc6	99	78.325	Nannospalax_galili
ENSSHAG00000010790	XRCC6	99	57.072	ENSNBRG00000004125	xrcc6	99	57.237	Neolamprologus_brichardi
ENSSHAG00000010790	XRCC6	95	77.586	ENSOPRG00000002386	XRCC6	99	77.586	Ochotona_princeps
ENSSHAG00000010790	XRCC6	99	77.504	ENSODEG00000015847	XRCC6	99	77.504	Octodon_degus
ENSSHAG00000010790	XRCC6	99	57.237	ENSONIG00000019715	xrcc6	99	57.237	Oreochromis_niloticus
ENSSHAG00000010790	XRCC6	68	81.884	ENSOANG00000011328	XRCC6	99	81.884	Ornithorhynchus_anatinus
ENSSHAG00000010790	XRCC6	99	79.441	ENSOCUG00000006948	XRCC6	99	79.441	Oryctolagus_cuniculus
ENSSHAG00000010790	XRCC6	99	56.607	ENSORLG00020007820	xrcc6	99	56.607	Oryzias_latipes_hni
ENSSHAG00000010790	XRCC6	99	56.117	ENSORLG00015006406	xrcc6	99	56.117	Oryzias_latipes_hsok
ENSSHAG00000010790	XRCC6	99	56.281	ENSOMEG00000008998	xrcc6	99	56.149	Oryzias_melastigma
ENSSHAG00000010790	XRCC6	99	81.117	ENSOGAG00000008821	XRCC6	100	81.117	Otolemur_garnettii
ENSSHAG00000010790	XRCC6	91	77.551	ENSPPAG00000037167	XRCC6	97	80.916	Pan_paniscus
ENSSHAG00000010790	XRCC6	99	77.833	ENSPTRG00000045824	XRCC6	99	78.694	Pan_troglodytes
ENSSHAG00000010790	XRCC6	99	77.833	ENSPTRG00000022548	XRCC6	99	78.694	Pan_troglodytes
ENSSHAG00000010790	XRCC6	99	77.668	ENSPANG00000001252	XRCC6	99	78.522	Papio_anubis
ENSSHAG00000010790	XRCC6	99	58.306	ENSPKIG00000003974	xrcc6	100	58.306	Paramormyrops_kingsleyae
ENSSHAG00000010790	XRCC6	99	55.702	ENSPMGG00000014220	xrcc6	100	55.868	Periophthalmus_magnuspinnatus
ENSSHAG00000010790	XRCC6	99	77.504	ENSPEMG00000023446	Xrcc6	99	77.504	Peromyscus_maniculatus_bairdii
ENSSHAG00000010790	XRCC6	100	89.508	ENSPCIG00000026409	XRCC6	100	89.508	Phascolarctos_cinereus
ENSSHAG00000010790	XRCC6	99	56.863	ENSPFOG00000017173	xrcc6	99	56.863	Poecilia_formosa
ENSSHAG00000010790	XRCC6	99	56.536	ENSPLAG00000000562	xrcc6	99	56.536	Poecilia_latipinna
ENSSHAG00000010790	XRCC6	99	57.026	ENSPMEG00000018478	xrcc6	99	57.026	Poecilia_mexicana
ENSSHAG00000010790	XRCC6	99	56.026	ENSPREG00000020957	xrcc6	93	56.026	Poecilia_reticulata
ENSSHAG00000010790	XRCC6	99	68.473	ENSPPYG00000011876	XRCC6	99	68.801	Pongo_abelii
ENSSHAG00000010790	XRCC6	99	77.833	ENSPVAG00000001168	XRCC6	99	77.340	Pteropus_vampyrus
ENSSHAG00000010790	XRCC6	99	56.579	ENSPNYG00000003815	xrcc6	99	53.991	Pundamilia_nyererei
ENSSHAG00000010790	XRCC6	100	76.393	ENSRNOG00000006392	Xrcc6	99	76.190	Rattus_norvegicus
ENSSHAG00000010790	XRCC6	99	71.757	ENSRBIG00000039794	XRCC6	99	72.085	Rhinopithecus_bieti
ENSSHAG00000010790	XRCC6	99	77.833	ENSRROG00000030297	XRCC6	99	78.161	Rhinopithecus_roxellana
ENSSHAG00000010790	XRCC6	67	66.830	ENSSBOG00000024724	-	99	66.830	Saimiri_boliviensis_boliviensis
ENSSHAG00000010790	XRCC6	99	59.935	ENSSFOG00015014409	xrcc6	100	59.609	Scleropages_formosus
ENSSHAG00000010790	XRCC6	99	57.401	ENSSMAG00000006496	xrcc6	99	57.566	Scophthalmus_maximus
ENSSHAG00000010790	XRCC6	99	56.536	ENSSDUG00000007542	xrcc6	99	56.699	Seriola_dumerili
ENSSHAG00000010790	XRCC6	99	56.373	ENSSLDG00000009974	xrcc6	99	56.536	Seriola_lalandi_dorsalis
ENSSHAG00000010790	XRCC6	100	74.141	ENSSPUG00000012086	XRCC6	100	74.141	Sphenodon_punctatus
ENSSHAG00000010790	XRCC6	99	56.863	ENSSPAG00000015199	xrcc6	99	57.026	Stegastes_partitus
ENSSHAG00000010790	XRCC6	96	69.744	ENSTGUG00000009852	-	95	69.811	Taeniopygia_guttata
ENSSHAG00000010790	XRCC6	99	55.428	ENSTRUG00000017070	xrcc6	99	55.428	Takifugu_rubripes
ENSSHAG00000010790	XRCC6	95	57.653	ENSTNIG00000012947	xrcc6	99	57.653	Tetraodon_nigroviridis
ENSSHAG00000010790	XRCC6	95	72.165	ENSTBEG00000011736	XRCC6	99	72.165	Tupaia_belangeri
ENSSHAG00000010790	XRCC6	100	65.082	ENSTTRG00000006749	XRCC6	100	65.082	Tursiops_truncatus
ENSSHAG00000010790	XRCC6	99	56.046	ENSXMAG00000009691	xrcc6	99	56.046	Xiphophorus_maculatus