EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000010918 (Gene tree)
Gene ID: 100918981
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 173017 bases
Position: chrGL849790.1:768898-941914
Accession: 100918981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000012757	PUF	PF00806.19	1.5e-72	1	8
ENSSHAP00000012757	PUF	PF00806.19	1.5e-72	2	8
ENSSHAP00000012757	PUF	PF00806.19	1.5e-72	3	8
ENSSHAP00000012757	PUF	PF00806.19	1.5e-72	4	8
ENSSHAP00000012757	PUF	PF00806.19	1.5e-72	5	8
ENSSHAP00000012757	PUF	PF00806.19	1.5e-72	6	8
ENSSHAP00000012757	PUF	PF00806.19	1.5e-72	7	8
ENSSHAP00000012757	PUF	PF00806.19	1.5e-72	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000012861	PUM1-201	5432	XM_003765492	ENSSHAP00000012757	1190 (aa)	XP_003765540	G3WBF2

Gene Model

Click here to download ENSSHAG00000010918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000010918's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000010918	PUM1	89	72.736	ENSSHAG00000002778	PUM2	100	72.644

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000010918	PUM1	100	97.815	ENSG00000134644	PUM1	100	97.815	Homo_sapiens
ENSSHAG00000010918	PUM1	85	91.084	ENSAPOG00000021632	pum1	100	91.325	Acanthochromis_polyacanthus
ENSSHAG00000010918	PUM1	100	97.483	ENSAMEG00000017656	PUM1	97	97.483	Ailuropoda_melanoleuca
ENSSHAG00000010918	PUM1	100	74.523	ENSACIG00000021013	pum1	100	76.553	Amphilophus_citrinellus
ENSSHAG00000010918	PUM1	85	91.084	ENSAOCG00000003944	pum1	100	91.325	Amphiprion_ocellaris
ENSSHAG00000010918	PUM1	85	91.084	ENSAPEG00000014550	pum1	100	91.325	Amphiprion_percula
ENSSHAG00000010918	PUM1	85	91.084	ENSATEG00000016004	pum1	100	91.325	Anabas_testudineus
ENSSHAG00000010918	PUM1	100	97.565	ENSAPLG00000009351	PUM1	100	97.565	Anas_platyrhynchos
ENSSHAG00000010918	PUM1	100	95.882	ENSACAG00000000682	PUM1	98	95.882	Anolis_carolinensis
ENSSHAG00000010918	PUM1	100	97.313	ENSANAG00000027865	PUM1	100	97.388	Aotus_nancymaae
ENSSHAG00000010918	PUM1	89	76.574	ENSACLG00000019354	pum1	100	78.743	Astatotilapia_calliptera
ENSSHAG00000010918	PUM1	100	78.798	ENSAMXG00000020607	pum1	96	78.214	Astyanax_mexicanus
ENSSHAG00000010918	PUM1	100	97.563	ENSBTAG00000018979	PUM1	100	98.309	Bos_taurus
ENSSHAG00000010918	PUM1	100	97.481	ENSCJAG00000006035	PUM1	100	97.585	Callithrix_jacchus
ENSSHAG00000010918	PUM1	100	95.298	ENSCAFG00000011205	PUM1	100	95.298	Canis_familiaris
ENSSHAG00000010918	PUM1	91	96.501	ENSCAFG00020024616	PUM1	99	97.251	Canis_lupus_dingo
ENSSHAG00000010918	PUM1	100	97.563	ENSCHIG00000012952	PUM1	100	97.826	Capra_hircus
ENSSHAG00000010918	PUM1	100	97.397	ENSTSYG00000008868	PUM1	100	97.397	Carlito_syrichta
ENSSHAG00000010918	PUM1	100	97.397	ENSCPOG00000031613	PUM1	100	97.484	Cavia_porcellus
ENSSHAG00000010918	PUM1	100	95.546	ENSCATG00000017991	PUM1	100	98.068	Cercocebus_atys
ENSSHAG00000010918	PUM1	100	97.481	ENSCLAG00000007662	PUM1	100	97.589	Chinchilla_lanigera
ENSSHAG00000010918	PUM1	100	96.839	ENSCSAG00000001028	PUM1	100	96.839	Chlorocebus_sabaeus
ENSSHAG00000010918	PUM1	93	94.692	ENSCHOG00000010245	PUM1	93	94.692	Choloepus_hoffmanni
ENSSHAG00000010918	PUM1	100	98.067	ENSCPBG00000009288	PUM1	100	98.551	Chrysemys_picta_bellii
ENSSHAG00000010918	PUM1	100	97.815	ENSCANG00000042606	PUM1	100	97.637	Colobus_angolensis_palliatus
ENSSHAG00000010918	PUM1	100	96.975	ENSCGRG00001024949	Pum1	100	97.170	Cricetulus_griseus_chok1gshd
ENSSHAG00000010918	PUM1	100	96.975	ENSCGRG00000014197	Pum1	100	97.170	Cricetulus_griseus_crigri
ENSSHAG00000010918	PUM1	89	75.856	ENSCSEG00000015981	pum1	100	77.911	Cynoglossus_semilaevis
ENSSHAG00000010918	PUM1	100	74.108	ENSCVAG00000007043	pum1	100	75.891	Cyprinodon_variegatus
ENSSHAG00000010918	PUM1	100	78.881	ENSDARG00000099256	pum1	100	78.715	Danio_rerio
ENSSHAG00000010918	PUM1	100	97.313	ENSDNOG00000010939	PUM1	100	97.313	Dasypus_novemcinctus
ENSSHAG00000010918	PUM1	85	97.101	ENSDORG00000001875	Pum1	100	97.101	Dipodomys_ordii
ENSSHAG00000010918	PUM1	88	92.780	ENSETEG00000004355	PUM1	87	92.780	Echinops_telfairi
ENSSHAG00000010918	PUM1	100	97.563	ENSEASG00005010813	PUM1	100	97.563	Equus_asinus_asinus
ENSSHAG00000010918	PUM1	100	97.397	ENSECAG00000021369	PUM1	100	97.397	Equus_caballus
ENSSHAG00000010918	PUM1	76	98.667	ENSEEUG00000003871	PUM1	74	98.667	Erinaceus_europaeus
ENSSHAG00000010918	PUM1	100	75.885	ENSELUG00000002409	pum1	100	82.447	Esox_lucius
ENSSHAG00000010918	PUM1	100	97.733	ENSFCAG00000010374	PUM1	100	98.309	Felis_catus
ENSSHAG00000010918	PUM1	100	96.154	ENSFALG00000001214	PUM1	97	96.154	Ficedula_albicollis
ENSSHAG00000010918	PUM1	100	97.397	ENSFDAG00000011319	PUM1	100	97.484	Fukomys_damarensis
ENSSHAG00000010918	PUM1	100	97.733	ENSGALG00000042598	PUM1	99	99.393	Gallus_gallus
ENSSHAG00000010918	PUM1	89	87.586	ENSGAFG00000015617	pum1	100	90.843	Gambusia_affinis
ENSSHAG00000010918	PUM1	100	74.835	ENSGACG00000005717	pum1	100	76.132	Gasterosteus_aculeatus
ENSSHAG00000010918	PUM1	100	97.733	ENSGAGG00000001290	PUM1	99	99.190	Gopherus_agassizii
ENSSHAG00000010918	PUM1	100	97.815	ENSGGOG00000011983	PUM1	100	97.799	Gorilla_gorilla
ENSSHAG00000010918	PUM1	100	74.523	ENSHBUG00000018718	pum1	100	76.388	Haplochromis_burtoni
ENSSHAG00000010918	PUM1	100	97.313	ENSHGLG00000013819	Pum1	100	97.379	Heterocephalus_glaber_female
ENSSHAG00000010918	PUM1	100	97.313	ENSHGLG00100008621	Pum1	100	97.379	Heterocephalus_glaber_male
ENSSHAG00000010918	PUM1	89	75.254	ENSHCOG00000005149	pum1	100	74.977	Hippocampus_comes
ENSSHAG00000010918	PUM1	100	77.159	ENSIPUG00000020421	pum1	100	77.261	Ictalurus_punctatus
ENSSHAG00000010918	PUM1	100	97.563	ENSSTOG00000010757	PUM1	100	97.563	Ictidomys_tridecemlineatus
ENSSHAG00000010918	PUM1	100	97.143	ENSJJAG00000000530	Pum1	100	97.143	Jaculus_jaculus
ENSSHAG00000010918	PUM1	100	74.274	ENSKMAG00000003481	pum1	100	76.056	Kryptolebias_marmoratus
ENSSHAG00000010918	PUM1	100	74.148	ENSLBEG00000002527	pum1	100	75.934	Labrus_bergylta
ENSSHAG00000010918	PUM1	100	86.522	ENSLACG00000017188	PUM1	99	86.473	Latimeria_chalumnae
ENSSHAG00000010918	PUM1	100	87.833	ENSLOCG00000005210	pum1	99	88.083	Lepisosteus_oculatus
ENSSHAG00000010918	PUM1	100	97.397	ENSLAFG00000003178	PUM1	100	97.397	Loxodonta_africana
ENSSHAG00000010918	PUM1	100	97.406	ENSMFAG00000010291	PUM1	100	98.068	Macaca_fascicularis
ENSSHAG00000010918	PUM1	100	97.406	ENSMMUG00000013520	PUM1	100	97.799	Macaca_mulatta
ENSSHAG00000010918	PUM1	100	97.815	ENSMNEG00000034639	PUM1	100	97.815	Macaca_nemestrina
ENSSHAG00000010918	PUM1	100	97.815	ENSMLEG00000038743	PUM1	100	97.637	Mandrillus_leucophaeus
ENSSHAG00000010918	PUM1	100	74.772	ENSMAMG00000011606	pum1	100	76.636	Mastacembelus_armatus
ENSSHAG00000010918	PUM1	100	74.523	ENSMZEG00005005834	pum1	100	76.388	Maylandia_zebra
ENSSHAG00000010918	PUM1	100	97.481	ENSMGAG00000000724	PUM1	100	97.481	Meleagris_gallopavo
ENSSHAG00000010918	PUM1	100	96.977	ENSMAUG00000022090	Pum1	100	97.065	Mesocricetus_auratus
ENSSHAG00000010918	PUM1	99	95.290	ENSMICG00000012213	-	100	94.444	Microcebus_murinus
ENSSHAG00000010918	PUM1	100	97.565	ENSMICG00000007713	-	100	97.826	Microcebus_murinus
ENSSHAG00000010918	PUM1	100	97.061	ENSMOCG00000015463	Pum1	100	97.061	Microtus_ochrogaster
ENSSHAG00000010918	PUM1	89	87.816	ENSMMOG00000019817	pum1	100	91.084	Mola_mola
ENSSHAG00000010918	PUM1	100	99.580	ENSMODG00000017067	PUM1	100	99.580	Monodelphis_domestica
ENSSHAG00000010918	PUM1	86	88.046	ENSMALG00000016399	pum1	100	91.325	Monopterus_albus
ENSSHAG00000010918	PUM1	100	96.891	MGP_CAROLIEiJ_G0026549	Pum1	100	96.891	Mus_caroli
ENSSHAG00000010918	PUM1	100	96.975	ENSMUSG00000028580	Pum1	100	96.975	Mus_musculus
ENSSHAG00000010918	PUM1	100	96.807	MGP_PahariEiJ_G0028881	Pum1	100	96.807	Mus_pahari
ENSSHAG00000010918	PUM1	100	96.891	MGP_SPRETEiJ_G0027529	Pum1	100	96.891	Mus_spretus
ENSSHAG00000010918	PUM1	100	97.563	ENSMPUG00000015454	PUM1	100	97.563	Mustela_putorius_furo
ENSSHAG00000010918	PUM1	100	97.313	ENSMLUG00000006490	PUM1	100	97.313	Myotis_lucifugus
ENSSHAG00000010918	PUM1	100	97.395	ENSNGAG00000002378	Pum1	100	97.395	Nannospalax_galili
ENSSHAG00000010918	PUM1	80	81.211	ENSNBRG00000010689	pum1	100	82.737	Neolamprologus_brichardi
ENSSHAG00000010918	PUM1	100	96.471	ENSNLEG00000001151	PUM1	100	95.398	Nomascus_leucogenys
ENSSHAG00000010918	PUM1	82	100.000	ENSMEUG00000000976	-	80	100.000	Notamacropus_eugenii
ENSSHAG00000010918	PUM1	84	98.131	ENSOPRG00000001776	PUM1	73	98.131	Ochotona_princeps
ENSSHAG00000010918	PUM1	100	97.563	ENSODEG00000003465	PUM1	100	97.563	Octodon_degus
ENSSHAG00000010918	PUM1	100	74.775	ENSONIG00000002290	pum1	100	76.719	Oreochromis_niloticus
ENSSHAG00000010918	PUM1	81	77.653	ENSOANG00000004902	-	100	76.020	Ornithorhynchus_anatinus
ENSSHAG00000010918	PUM1	100	96.893	ENSOCUG00000008641	PUM1	99	96.893	Oryctolagus_cuniculus
ENSSHAG00000010918	PUM1	100	75.186	ENSORLG00000011482	pum1	100	76.218	Oryzias_latipes
ENSSHAG00000010918	PUM1	100	75.269	ENSORLG00020019461	pum1	100	76.218	Oryzias_latipes_hni
ENSSHAG00000010918	PUM1	100	75.269	ENSORLG00015011375	pum1	100	76.301	Oryzias_latipes_hsok
ENSSHAG00000010918	PUM1	85	92.771	ENSOMEG00000009312	pum1	100	91.084	Oryzias_melastigma
ENSSHAG00000010918	PUM1	100	94.468	ENSOGAG00000011063	PUM1	100	94.552	Otolemur_garnettii
ENSSHAG00000010918	PUM1	100	96.725	ENSOARG00000001899	PUM1	100	97.826	Ovis_aries
ENSSHAG00000010918	PUM1	100	97.815	ENSPPAG00000044003	PUM1	100	97.799	Pan_paniscus
ENSSHAG00000010918	PUM1	100	97.815	ENSPPRG00000001370	PUM1	100	97.637	Panthera_pardus
ENSSHAG00000010918	PUM1	100	97.647	ENSPTIG00000010798	PUM1	100	97.388	Panthera_tigris_altaica
ENSSHAG00000010918	PUM1	100	97.815	ENSPTRG00000000453	PUM1	100	97.799	Pan_troglodytes
ENSSHAG00000010918	PUM1	100	97.815	ENSPANG00000016338	PUM1	100	98.068	Papio_anubis
ENSSHAG00000010918	PUM1	100	78.678	ENSPKIG00000010578	pum1	100	78.347	Paramormyrops_kingsleyae
ENSSHAG00000010918	PUM1	100	98.067	ENSPSIG00000014118	PUM1	100	98.067	Pelodiscus_sinensis
ENSSHAG00000010918	PUM1	80	79.559	ENSPMGG00000005836	pum1	100	81.197	Periophthalmus_magnuspinnatus
ENSSHAG00000010918	PUM1	100	97.061	ENSPEMG00000010009	Pum1	100	97.065	Peromyscus_maniculatus_bairdii
ENSSHAG00000010918	PUM1	100	100.000	ENSPCIG00000014151	PUM1	100	100.000	Phascolarctos_cinereus
ENSSHAG00000010918	PUM1	94	77.165	ENSPFOG00000007289	pum1	99	82.875	Poecilia_formosa
ENSSHAG00000010918	PUM1	100	73.468	ENSPLAG00000007256	pum1	100	77.743	Poecilia_latipinna
ENSSHAG00000010918	PUM1	90	77.348	ENSPMEG00000019543	pum1	99	78.125	Poecilia_mexicana
ENSSHAG00000010918	PUM1	100	74.689	ENSPREG00000005195	pum1	100	80.387	Poecilia_reticulata
ENSSHAG00000010918	PUM1	100	95.881	ENSPPYG00000001621	PUM1	100	95.881	Pongo_abelii
ENSSHAG00000010918	PUM1	78	99.074	ENSPCAG00000001979	PUM1	74	99.074	Procavia_capensis
ENSSHAG00000010918	PUM1	100	97.565	ENSPCOG00000004398	PUM1	100	97.826	Propithecus_coquereli
ENSSHAG00000010918	PUM1	100	95.546	ENSPVAG00000005207	PUM1	97	95.462	Pteropus_vampyrus
ENSSHAG00000010918	PUM1	100	74.606	ENSPNYG00000009518	pum1	100	81.928	Pundamilia_nyererei
ENSSHAG00000010918	PUM1	100	78.881	ENSPNAG00000026728	pum1	100	79.666	Pygocentrus_nattereri
ENSSHAG00000010918	PUM1	100	96.807	ENSRNOG00000011709	Pum1	100	96.807	Rattus_norvegicus
ENSSHAG00000010918	PUM1	100	97.815	ENSRBIG00000042521	PUM1	100	98.068	Rhinopithecus_bieti
ENSSHAG00000010918	PUM1	100	97.815	ENSRROG00000020156	PUM1	100	97.647	Rhinopithecus_roxellana
ENSSHAG00000010918	PUM1	100	97.565	ENSSBOG00000032037	PUM1	100	97.589	Saimiri_boliviensis_boliviensis
ENSSHAG00000010918	PUM1	89	88.046	ENSSMAG00000010918	pum1	100	91.325	Scophthalmus_maximus
ENSSHAG00000010918	PUM1	100	74.689	ENSSDUG00000009021	pum1	100	76.719	Seriola_dumerili
ENSSHAG00000010918	PUM1	95	75.830	ENSSLDG00000009667	pum1	100	78.261	Seriola_lalandi_dorsalis
ENSSHAG00000010918	PUM1	94	96.753	ENSSARG00000003055	PUM1	91	96.753	Sorex_araneus
ENSSHAG00000010918	PUM1	100	97.395	ENSSPUG00000006267	PUM1	100	97.395	Sphenodon_punctatus
ENSSHAG00000010918	PUM1	85	91.084	ENSSPAG00000016636	pum1	100	91.325	Stegastes_partitus
ENSSHAG00000010918	PUM1	100	97.817	ENSSSCG00000003591	PUM1	100	98.309	Sus_scrofa
ENSSHAG00000010918	PUM1	100	74.502	ENSTRUG00000013121	pum1	100	82.367	Takifugu_rubripes
ENSSHAG00000010918	PUM1	100	74.523	ENSTNIG00000016983	pum1	99	76.305	Tetraodon_nigroviridis
ENSSHAG00000010918	PUM1	87	93.902	ENSTBEG00000013810	PUM1	89	93.902	Tupaia_belangeri
ENSSHAG00000010918	PUM1	92	98.086	ENSTTRG00000007436	PUM1	90	98.086	Tursiops_truncatus
ENSSHAG00000010918	PUM1	99	97.053	ENSUAMG00000018262	-	100	97.053	Ursus_americanus
ENSSHAG00000010918	PUM1	95	98.309	ENSUMAG00000009211	PUM1	100	98.309	Ursus_maritimus
ENSSHAG00000010918	PUM1	92	98.134	ENSVPAG00000005902	PUM1	92	98.134	Vicugna_pacos
ENSSHAG00000010918	PUM1	100	97.565	ENSVVUG00000014631	PUM1	100	98.309	Vulpes_vulpes
ENSSHAG00000010918	PUM1	100	87.668	ENSXETG00000012904	pum1	99	86.913	Xenopus_tropicalis
ENSSHAG00000010918	PUM1	100	73.942	ENSXMAG00000002945	pum1	100	77.743	Xiphophorus_maculatus