EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000011013 (Gene tree)
Gene ID: 100921588
Gene Symbol: -
Alias: -
Full Name: septin-2
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 89076 bases
Position: chrGL849528.1:783724-872799
Accession: 100921588
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000012874	MMR_HSR1	PF01926.23	3.7e-08	1	1
ENSSHAP00000012875	MMR_HSR1	PF01926.23	3.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000012980	-	1390	-	ENSSHAP00000012874	349 (aa)	XP_012399769	G3WBR9
ENSSHAT00000012981	-	1367	-	ENSSHAP00000012875	350 (aa)	-	G3WBS0

Gene Model

Click here to download ENSSHAG00000011013's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr05100	Bacterial invasion of epithelial cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000011013's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000011013	-	91	41.791	ENSSHAG00000006125	SEPT11	80	41.076
ENSSHAG00000011013	-	93	88.957	ENSSHAG00000012877	SEPT2	93	88.623
ENSSHAG00000011013	-	83	61.724	ENSSHAG00000003788	SEPT7	67	61.724
ENSSHAG00000011013	-	85	48.837	ENSSHAG00000012446	SEPT3	81	48.837
ENSSHAG00000011013	-	91	41.420	ENSSHAG00000007460	SEPT6	76	41.420
ENSSHAG00000011013	-	83	49.828	ENSSHAG00000006546	-	50	49.828
ENSSHAG00000011013	-	94	61.473	ENSSHAG00000010070	SEPT4	74	61.473
ENSSHAG00000011013	-	91	42.090	ENSSHAG00000012403	-	74	42.090
ENSSHAG00000011013	-	85	45.791	ENSSHAG00000007036	SEPT12	83	44.918
ENSSHAG00000011013	-	96	55.337	ENSSHAG00000006478	SEPT1	97	55.337
ENSSHAG00000011013	-	83	67.010	ENSSHAG00000011753	-	80	65.169

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000011013	-	99	92.754	ENSAPOG00000021616	zgc:63587	99	92.754	Acanthochromis_polyacanthus
ENSSHAG00000011013	-	88	93.464	ENSACIG00000006540	zgc:63587	99	93.464	Amphilophus_citrinellus
ENSSHAG00000011013	-	99	92.464	ENSAOCG00000015026	zgc:63587	99	92.464	Amphiprion_ocellaris
ENSSHAG00000011013	-	99	92.464	ENSAPEG00000017625	zgc:63587	99	92.464	Amphiprion_percula
ENSSHAG00000011013	-	99	91.594	ENSATEG00000020519	zgc:63587	99	91.594	Anabas_testudineus
ENSSHAG00000011013	-	100	93.983	ENSACAG00000000754	-	100	93.983	Anolis_carolinensis
ENSSHAG00000011013	-	99	91.667	ENSACLG00000011287	zgc:63587	100	91.667	Astatotilapia_calliptera
ENSSHAG00000011013	-	100	92.264	ENSAMXG00000006164	zgc:63587	96	92.264	Astyanax_mexicanus
ENSSHAG00000011013	-	100	94.269	ENSCPBG00000010648	-	100	94.269	Chrysemys_picta_bellii
ENSSHAG00000011013	-	99	91.618	ENSCSEG00000019626	zgc:63587	99	91.618	Cynoglossus_semilaevis
ENSSHAG00000011013	-	99	91.304	ENSCVAG00000017959	zgc:63587	99	91.304	Cyprinodon_variegatus
ENSSHAG00000011013	-	68	89.076	ENSDARG00000017140	zgc:63587	86	89.076	Danio_rerio
ENSSHAG00000011013	-	100	91.977	ENSELUG00000009060	zgc:63587	100	91.977	Esox_lucius
ENSSHAG00000011013	-	100	93.983	ENSFALG00000008010	-	100	93.983	Ficedula_albicollis
ENSSHAG00000011013	-	99	91.304	ENSFHEG00000018583	zgc:63587	99	91.304	Fundulus_heteroclitus
ENSSHAG00000011013	-	100	91.977	ENSGMOG00000013563	zgc:63587	100	91.977	Gadus_morhua
ENSSHAG00000011013	-	100	94.269	ENSGALG00000001652	SEPT2L	100	94.269	Gallus_gallus
ENSSHAG00000011013	-	99	91.304	ENSGAFG00000000805	zgc:63587	99	91.304	Gambusia_affinis
ENSSHAG00000011013	-	99	91.304	ENSGACG00000005552	zgc:63587	99	91.304	Gasterosteus_aculeatus
ENSSHAG00000011013	-	100	94.269	ENSGAGG00000014380	-	100	94.269	Gopherus_agassizii
ENSSHAG00000011013	-	99	91.667	ENSHBUG00000013996	zgc:63587	100	91.667	Haplochromis_burtoni
ENSSHAG00000011013	-	99	92.174	ENSHCOG00000005893	zgc:63587	99	92.174	Hippocampus_comes
ENSSHAG00000011013	-	99	90.462	ENSKMAG00000003351	zgc:63587	99	90.462	Kryptolebias_marmoratus
ENSSHAG00000011013	-	99	91.014	ENSLBEG00000025452	zgc:63587	99	91.014	Labrus_bergylta
ENSSHAG00000011013	-	100	88.286	ENSLACG00000015335	zgc:63587	100	88.286	Latimeria_chalumnae
ENSSHAG00000011013	-	100	92.837	ENSLOCG00000001793	zgc:63587	100	92.837	Lepisosteus_oculatus
ENSSHAG00000011013	-	99	92.464	ENSMAMG00000014467	zgc:63587	99	92.464	Mastacembelus_armatus
ENSSHAG00000011013	-	99	91.667	ENSMZEG00005009713	zgc:63587	100	91.667	Maylandia_zebra
ENSSHAG00000011013	-	100	81.375	ENSMGAG00000001294	-	100	81.375	Meleagris_gallopavo
ENSSHAG00000011013	-	93	90.798	ENSMMOG00000011692	zgc:63587	93	90.798	Mola_mola
ENSSHAG00000011013	-	100	97.143	ENSMODG00000010193	-	95	97.143	Monodelphis_domestica
ENSSHAG00000011013	-	88	93.137	ENSMALG00000020157	zgc:63587	99	93.137	Monopterus_albus
ENSSHAG00000011013	-	99	91.667	ENSNBRG00000018582	-	100	91.667	Neolamprologus_brichardi
ENSSHAG00000011013	-	99	91.092	ENSONIG00000014408	zgc:63587	100	91.092	Oreochromis_niloticus
ENSSHAG00000011013	-	99	91.618	ENSORLG00000002669	zgc:63587	99	91.618	Oryzias_latipes
ENSSHAG00000011013	-	99	91.618	ENSORLG00020005356	zgc:63587	99	91.618	Oryzias_latipes_hni
ENSSHAG00000011013	-	99	91.618	ENSORLG00015015159	zgc:63587	99	91.618	Oryzias_latipes_hsok
ENSSHAG00000011013	-	99	91.908	ENSOMEG00000017925	zgc:63587	99	91.908	Oryzias_melastigma
ENSSHAG00000011013	-	100	92.550	ENSPKIG00000024604	zgc:63587	100	92.550	Paramormyrops_kingsleyae
ENSSHAG00000011013	-	100	93.410	ENSPSIG00000002946	-	100	93.410	Pelodiscus_sinensis
ENSSHAG00000011013	-	89	90.939	ENSPMGG00000018374	zgc:63587	99	90.939	Periophthalmus_magnuspinnatus
ENSSHAG00000011013	-	100	97.994	ENSPCIG00000025491	-	100	97.994	Phascolarctos_cinereus
ENSSHAG00000011013	-	99	91.594	ENSPFOG00000011730	zgc:63587	99	91.594	Poecilia_formosa
ENSSHAG00000011013	-	99	91.594	ENSPLAG00000018604	zgc:63587	99	91.594	Poecilia_latipinna
ENSSHAG00000011013	-	99	91.304	ENSPMEG00000004117	zgc:63587	99	91.304	Poecilia_mexicana
ENSSHAG00000011013	-	99	91.014	ENSPREG00000011612	zgc:63587	99	91.014	Poecilia_reticulata
ENSSHAG00000011013	-	99	91.379	ENSPNYG00000008409	zgc:63587	100	91.379	Pundamilia_nyererei
ENSSHAG00000011013	-	100	91.404	ENSPNAG00000000463	zgc:63587	88	90.854	Pygocentrus_nattereri
ENSSHAG00000011013	-	100	92.550	ENSSFOG00015014108	zgc:63587	100	92.550	Scleropages_formosus
ENSSHAG00000011013	-	99	91.860	ENSSMAG00000006113	-	99	91.860	Scophthalmus_maximus
ENSSHAG00000011013	-	97	92.330	ENSSDUG00000002763	zgc:63587	94	92.330	Seriola_dumerili
ENSSHAG00000011013	-	99	91.884	ENSSLDG00000004826	zgc:63587	99	91.884	Seriola_lalandi_dorsalis
ENSSHAG00000011013	-	100	93.983	ENSSPUG00000015358	-	100	93.983	Sphenodon_punctatus
ENSSHAG00000011013	-	57	92.929	ENSSPAG00000000807	zgc:63587	63	92.929	Stegastes_partitus
ENSSHAG00000011013	-	99	92.754	ENSSPAG00000015654	-	99	92.754	Stegastes_partitus
ENSSHAG00000011013	-	100	93.983	ENSTGUG00000008445	-	100	93.983	Taeniopygia_guttata
ENSSHAG00000011013	-	99	92.464	ENSTRUG00000016492	zgc:63587	99	92.464	Takifugu_rubripes
ENSSHAG00000011013	-	99	91.014	ENSTNIG00000015927	zgc:63587	99	91.014	Tetraodon_nigroviridis
ENSSHAG00000011013	-	100	92.550	ENSXETG00000018605	sept2-a	99	92.550	Xenopus_tropicalis
ENSSHAG00000011013	-	95	90.090	ENSXCOG00000002678	zgc:63587	99	90.090	Xiphophorus_couchianus
ENSSHAG00000011013	-	99	91.304	ENSXMAG00000014718	zgc:63587	99	91.304	Xiphophorus_maculatus